RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 AGLP35573 1532 aa19.88■□□□□ 0.77
HDAC1-208ENST00000482310 KIF3BO15066 747 aa19.88■□□□□ 0.77
HDAC1-208ENST00000482310 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
HDAC1-208ENST00000482310 HFM1A2PYH4 1435 aa19.87■□□□□ 0.77
HDAC1-208ENST00000482310 CLTCQ00610 1675 aaKnown RBP19.86■□□□□ 0.77
HDAC1-208ENST00000482310 RIMS1Q86UR5 1692 aaKnown RBP19.86■□□□□ 0.77
HDAC1-208ENST00000482310 MADDQ8WXG6 1647 aa19.86■□□□□ 0.77
HDAC1-208ENST00000482310 DEPDC5O75140 1603 aa19.85■□□□□ 0.77
HDAC1-208ENST00000482310 GGT6Q6P531 493 aa19.85■□□□□ 0.77
HDAC1-208ENST00000482310 MROH1Q8NDA8 1641 aa19.84■□□□□ 0.77
HDAC1-208ENST00000482310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.774e-9■■■□□ 16.4
HDAC1-208ENST00000482310 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
HDAC1-208ENST00000482310 UNC13BO14795 1591 aa19.83■□□□□ 0.77
HDAC1-208ENST00000482310 CFAP65Q6ZU64 1925 aaKnown RBP19.83■□□□□ 0.77
HDAC1-208ENST00000482310 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
HDAC1-208ENST00000482310 PRDM15P57071 1507 aaPredicted RBP19.8■□□□□ 0.76
HDAC1-208ENST00000482310 RAB3GAP2Q9H2M9 1393 aa19.78■□□□□ 0.76
HDAC1-208ENST00000482310 ZC3H13Q5T200 1668 aaKnown RBP19.78■□□□□ 0.76
HDAC1-208ENST00000482310 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
HDAC1-208ENST00000482310 LMTK3Q96Q04 1460 aa19.77■□□□□ 0.76
HDAC1-208ENST00000482310 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
HDAC1-208ENST00000482310 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
HDAC1-208ENST00000482310 KDM5DQ9BY66 1539 aa19.76■□□□□ 0.75
HDAC1-208ENST00000482310 TRIM52Q96A61 297 aa19.75■□□□□ 0.75
HDAC1-208ENST00000482310 ESF1Q9H501 851 aaKnown RBP19.75■□□□□ 0.75
HDAC1-208ENST00000482310 C3P01024 1663 aa19.74■□□□□ 0.75
HDAC1-208ENST00000482310 KANK1Q14678 1352 aa19.73■□□□□ 0.75
HDAC1-208ENST00000482310 ABCC3O15438 1527 aa19.73■□□□□ 0.75
HDAC1-208ENST00000482310 MROH2AA6NES4 1674 aa19.73■□□□□ 0.75
HDAC1-208ENST00000482310 TET3O43151 1660 aa19.71■□□□□ 0.75
HDAC1-208ENST00000482310 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
HDAC1-208ENST00000482310 FAM135AQ9P2D6 1515 aa19.71■□□□□ 0.75
HDAC1-208ENST00000482310 NUP155O75694 1391 aa19.7■□□□□ 0.74
HDAC1-208ENST00000482310 VWDEQ8N2E2 1590 aa19.7■□□□□ 0.74
HDAC1-208ENST00000482310 FBXO41Q8TF61 875 aa19.7■□□□□ 0.74
HDAC1-208ENST00000482310 E9PCH4 1651 aa19.68■□□□□ 0.74
HDAC1-208ENST00000482310 HSPA2P54652 639 aa19.66■□□□□ 0.74
HDAC1-208ENST00000482310 EFCAB6Q5THR3 1501 aa19.66■□□□□ 0.74
HDAC1-208ENST00000482310 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
HDAC1-208ENST00000482310 PZPP20742 1482 aa19.65■□□□□ 0.74
HDAC1-208ENST00000482310 PREX1Q8TCU6 1659 aa19.65■□□□□ 0.74
HDAC1-208ENST00000482310 LMTK2Q8IWU2 1503 aa19.63■□□□□ 0.73
HDAC1-208ENST00000482310 CEBPAP49715 358 aaPredicted RBP19.63■□□□□ 0.73
HDAC1-208ENST00000482310 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
HDAC1-208ENST00000482310 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
HDAC1-208ENST00000482310 ZMYM3Q14202 1370 aa19.6■□□□□ 0.73
HDAC1-208ENST00000482310 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
HDAC1-208ENST00000482310 NPATQ14207 1427 aa19.58■□□□□ 0.72
HDAC1-208ENST00000482310 FOXD1Q16676 465 aa19.57■□□□□ 0.72
HDAC1-208ENST00000482310 FBXO31Q5XUX0 539 aaPredicted RBP19.56■□□□□ 0.72
HDAC1-208ENST00000482310 PKD2Q13563 968 aa19.55■□□□□ 0.72
HDAC1-208ENST00000482310 MPHOSPH9Q99550 1183 aa19.55■□□□□ 0.72
HDAC1-208ENST00000482310 MYO3AQ8NEV4 1616 aa19.54■□□□□ 0.72
HDAC1-208ENST00000482310 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
HDAC1-208ENST00000482310 SYNMO15061 1565 aa19.53■□□□□ 0.72
HDAC1-208ENST00000482310 HRCP23327 699 aa19.53■□□□□ 0.72
HDAC1-208ENST00000482310 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
HDAC1-208ENST00000482310 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.71
HDAC1-208ENST00000482310 ARHGAP31Q2M1Z3 1444 aa19.51■□□□□ 0.71
HDAC1-208ENST00000482310 RPRD2Q5VT52 1461 aaKnown RBP19.51■□□□□ 0.71
HDAC1-208ENST00000482310 UGGT1Q9NYU2 1555 aa19.51■□□□□ 0.71
HDAC1-208ENST00000482310 SETD1BQ9UPS6 1966 aaKnown RBP19.51■□□□□ 0.71
HDAC1-208ENST00000482310 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
HDAC1-208ENST00000482310 CLTCL1P53675 1640 aa19.48■□□□□ 0.71
HDAC1-208ENST00000482310 KIF1BO60333 1816 aa19.48■□□□□ 0.71
HDAC1-208ENST00000482310 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
HDAC1-208ENST00000482310 TNRQ92752 1358 aa19.47■□□□□ 0.71
HDAC1-208ENST00000482310 DHX57Q6P158 1386 aaKnown RBP19.46■□□□□ 0.71
HDAC1-208ENST00000482310 TRPM2O94759 1503 aa19.46■□□□□ 0.71
HDAC1-208ENST00000482310 ZNF142P52746 1687 aaPredicted RBP19.45■□□□□ 0.7
HDAC1-208ENST00000482310 NOS1P29475 1434 aa19.44■□□□□ 0.7
HDAC1-208ENST00000482310 CERKQ8TCT0 537 aa19.44■□□□□ 0.7
HDAC1-208ENST00000482310 STRCQ7RTU9 1775 aa19.44■□□□□ 0.7
HDAC1-208ENST00000482310 CEP170BQ9Y4F5 1589 aaPredicted RBP19.43■□□□□ 0.7
HDAC1-208ENST00000482310 UBR1Q8IWV7 1749 aa19.42■□□□□ 0.7
HDAC1-208ENST00000482310 PLA2R1Q13018 1463 aa19.41■□□□□ 0.7
HDAC1-208ENST00000482310 PTPRTO14522 1441 aa19.4■□□□□ 0.7
HDAC1-208ENST00000482310 UHRF1BP1Q6BDS2 1440 aa19.4■□□□□ 0.7
HDAC1-208ENST00000482310 CHGAP10645 457 aaKnown RBP19.39■□□□□ 0.69
HDAC1-208ENST00000482310 ADGRB3O60242 1522 aa19.37■□□□□ 0.69
HDAC1-208ENST00000482310 NLRP1Q9C000 1473 aa19.37■□□□□ 0.69
HDAC1-208ENST00000482310 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
HDAC1-208ENST00000482310 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
HDAC1-208ENST00000482310 STAG3Q9UJ98 1225 aa19.36■□□□□ 0.69
HDAC1-208ENST00000482310 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
HDAC1-208ENST00000482310 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
HDAC1-208ENST00000482310 IDI1Q13907 227 aa19.35■□□□□ 0.69
HDAC1-208ENST00000482310 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
HDAC1-208ENST00000482310 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
HDAC1-208ENST00000482310 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
HDAC1-208ENST00000482310 SLC52A1Q9NWF4 448 aa19.31■□□□□ 0.68
HDAC1-208ENST00000482310 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
HDAC1-208ENST00000482310 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
HDAC1-208ENST00000482310 PPLO60437 1756 aa19.29■□□□□ 0.68
HDAC1-208ENST00000482310 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
HDAC1-208ENST00000482310 IFT172Q9UG01 1749 aa19.28■□□□□ 0.68
HDAC1-208ENST00000482310 RGL3Q3MIN7 710 aa19.27■□□□□ 0.68
HDAC1-208ENST00000482310 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
HDAC1-208ENST00000482310 NUTM2DQ5VT03 806 aaPredicted RBP19.25■□□□□ 0.67
HDAC1-208ENST00000482310 LTBP4Q8N2S1 1624 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms