RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.29
HLA-F-225ENST00000482257 NAIPQ13075 1403 aa23.14■■□□□ 1.29
HLA-F-225ENST00000482257 SETD5Q9C0A6 1442 aa23.13■■□□□ 1.29
HLA-F-225ENST00000482257 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
HLA-F-225ENST00000482257 ERBINQ96RT1 1412 aa23.11■■□□□ 1.29
HLA-F-225ENST00000482257 ANKRD50Q9ULJ7 1429 aa23.11■■□□□ 1.29
HLA-F-225ENST00000482257 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
HLA-F-225ENST00000482257 C3P01024 1663 aa23.09■■□□□ 1.29
HLA-F-225ENST00000482257 EIF2AK4Q9P2K8 1649 aaKnown RBP23.06■■□□□ 1.28
HLA-F-225ENST00000482257 HRCP23327 699 aa23.05■■□□□ 1.28
HLA-F-225ENST00000482257 HSPA2P54652 639 aa23.04■■□□□ 1.28
HLA-F-225ENST00000482257 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
HLA-F-225ENST00000482257 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
HLA-F-225ENST00000482257 PREX1Q8TCU6 1659 aa23.02■■□□□ 1.28
HLA-F-225ENST00000482257 MROH2AA6NES4 1674 aa23.01■■□□□ 1.27
HLA-F-225ENST00000482257 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
HLA-F-225ENST00000482257 KIF3BO15066 747 aa23■■□□□ 1.27
HLA-F-225ENST00000482257 GGT6Q6P531 493 aa22.99■■□□□ 1.27
HLA-F-225ENST00000482257 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
HLA-F-225ENST00000482257 ZMYM3Q14202 1370 aa22.97■■□□□ 1.27
HLA-F-225ENST00000482257 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
HLA-F-225ENST00000482257 RNF17Q9BXT8 1623 aaKnown RBP22.95■■□□□ 1.26
HLA-F-225ENST00000482257 UNC13BO14795 1591 aa22.94■■□□□ 1.26
HLA-F-225ENST00000482257 TRIM52Q96A61 297 aa22.94■■□□□ 1.26
HLA-F-225ENST00000482257 DEPDC5O75140 1603 aa22.93■■□□□ 1.26
HLA-F-225ENST00000482257 UHRF1BP1Q6BDS2 1440 aa22.93■■□□□ 1.26
HLA-F-225ENST00000482257 KANK1Q14678 1352 aa22.93■■□□□ 1.26
HLA-F-225ENST00000482257 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
HLA-F-225ENST00000482257 NPATQ14207 1427 aa22.91■■□□□ 1.26
HLA-F-225ENST00000482257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
HLA-F-225ENST00000482257 NUP155O75694 1391 aa22.89■■□□□ 1.26
HLA-F-225ENST00000482257 PRDM15P57071 1507 aaPredicted RBP22.89■■□□□ 1.26
HLA-F-225ENST00000482257 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
HLA-F-225ENST00000482257 MROH1Q8NDA8 1641 aa22.87■■□□□ 1.25
HLA-F-225ENST00000482257 FAM135AQ9P2D6 1515 aa22.87■■□□□ 1.25
HLA-F-225ENST00000482257 STRCQ7RTU9 1775 aa22.86■■□□□ 1.25
HLA-F-225ENST00000482257 IQGAP3Q86VI3 1631 aa22.85■■□□□ 1.25
HLA-F-225ENST00000482257 MYO3AQ8NEV4 1616 aa22.83■■□□□ 1.25
HLA-F-225ENST00000482257 VWDEQ8N2E2 1590 aa22.83■■□□□ 1.25
HLA-F-225ENST00000482257 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.24
HLA-F-225ENST00000482257 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
HLA-F-225ENST00000482257 SLC4A1APQ9BWU0 796 aaKnown RBP22.81■■□□□ 1.24
HLA-F-225ENST00000482257 ABCC3O15438 1527 aa22.8■■□□□ 1.24
HLA-F-225ENST00000482257 ZNF142P52746 1687 aaPredicted RBP22.8■■□□□ 1.24
HLA-F-225ENST00000482257 PZPP20742 1482 aa22.79■■□□□ 1.24
HLA-F-225ENST00000482257 LMTK2Q8IWU2 1503 aa22.79■■□□□ 1.24
HLA-F-225ENST00000482257 MPHOSPH9Q99550 1183 aa22.79■■□□□ 1.24
HLA-F-225ENST00000482257 CEP152O94986 1710 aa22.78■■□□□ 1.24
HLA-F-225ENST00000482257 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
HLA-F-225ENST00000482257 TET3O43151 1660 aa22.77■■□□□ 1.24
HLA-F-225ENST00000482257 CEP170BQ9Y4F5 1589 aaPredicted RBP22.76■■□□□ 1.23
HLA-F-225ENST00000482257 CAMSAP1Q5T5Y3 1602 aa22.74■■□□□ 1.23
HLA-F-225ENST00000482257 ILDR1Q86SU0 546 aaPredicted RBP22.73■■□□□ 1.23
HLA-F-225ENST00000482257 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
HLA-F-225ENST00000482257 PKD2Q13563 968 aa22.72■■□□□ 1.23
HLA-F-225ENST00000482257 TNRQ92752 1358 aa22.72■■□□□ 1.23
HLA-F-225ENST00000482257 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
HLA-F-225ENST00000482257 A2ML1A8K2U0 1454 aa22.7■■□□□ 1.22
HLA-F-225ENST00000482257 RPRD2Q5VT52 1461 aaKnown RBP22.7■■□□□ 1.22
HLA-F-225ENST00000482257 ARHGAP31Q2M1Z3 1444 aa22.69■■□□□ 1.22
HLA-F-225ENST00000482257 E9PCH4 1651 aa22.68■■□□□ 1.22
HLA-F-225ENST00000482257 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
HLA-F-225ENST00000482257 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
HLA-F-225ENST00000482257 ERVK-7P63135 1459 aa22.66■■□□□ 1.22
HLA-F-225ENST00000482257 PTPRTO14522 1441 aa22.66■■□□□ 1.22
HLA-F-225ENST00000482257 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
HLA-F-225ENST00000482257 NCKAP5LQ9HCH0 1330 aa22.64■■□□□ 1.22
HLA-F-225ENST00000482257 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
HLA-F-225ENST00000482257 CFAP65Q6ZU64 1925 aaKnown RBP22.62■■□□□ 1.21
HLA-F-225ENST00000482257 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
HLA-F-225ENST00000482257 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
HLA-F-225ENST00000482257 SPHKAPQ2M3C7 1700 aa22.6■■□□□ 1.21
HLA-F-225ENST00000482257 FOXD1Q16676 465 aa22.59■■□□□ 1.21
HLA-F-225ENST00000482257 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
HLA-F-225ENST00000482257 NEURL4Q96JN8 1562 aa22.57■■□□□ 1.2
HLA-F-225ENST00000482257 UGGT1Q9NYU2 1555 aa22.56■■□□□ 1.2
HLA-F-225ENST00000482257 CERKQ8TCT0 537 aa22.55■■□□□ 1.2
HLA-F-225ENST00000482257 FBXO41Q8TF61 875 aa22.55■■□□□ 1.2
HLA-F-225ENST00000482257 LTBP4Q8N2S1 1624 aa22.55■■□□□ 1.2
HLA-F-225ENST00000482257 TRPM2O94759 1503 aa22.55■■□□□ 1.2
HLA-F-225ENST00000482257 NOS1P29475 1434 aa22.55■■□□□ 1.2
HLA-F-225ENST00000482257 POLR1AO95602 1720 aaPredicted RBP22.53■■□□□ 1.2
HLA-F-225ENST00000482257 CCDC144AA2RUR9 1427 aa22.52■■□□□ 1.2
HLA-F-225ENST00000482257 SLC52A1Q9NWF4 448 aa22.51■■□□□ 1.19
HLA-F-225ENST00000482257 UBR1Q8IWV7 1749 aa22.51■■□□□ 1.19
HLA-F-225ENST00000482257 SYNMO15061 1565 aa22.5■■□□□ 1.19
HLA-F-225ENST00000482257 ZNF335Q9H4Z2 1342 aaPredicted RBP22.48■■□□□ 1.19
HLA-F-225ENST00000482257 THEMISQ8N1K5 641 aaPredicted RBP22.47■■□□□ 1.19
HLA-F-225ENST00000482257 PIK3C2BO00750 1634 aa22.46■■□□□ 1.19
HLA-F-225ENST00000482257 CLTCL1P53675 1640 aa22.45■■□□□ 1.18
HLA-F-225ENST00000482257 KIF1BO60333 1816 aa22.45■■□□□ 1.18
HLA-F-225ENST00000482257 MED14O60244 1454 aa22.44■■□□□ 1.18
HLA-F-225ENST00000482257 NEUROD1Q13562 356 aa22.42■■□□□ 1.18
HLA-F-225ENST00000482257 ANKLE2Q86XL3 938 aa22.42■■□□□ 1.18
HLA-F-225ENST00000482257 SIN3AQ96ST3 1273 aa22.42■■□□□ 1.18
HLA-F-225ENST00000482257 ARHGAP23Q9P227 1491 aa22.41■■□□□ 1.18
HLA-F-225ENST00000482257 IDI1Q13907 227 aa22.41■■□□□ 1.18
HLA-F-225ENST00000482257 SLIT1O75093 1534 aa22.41■■□□□ 1.18
HLA-F-225ENST00000482257 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
HLA-F-225ENST00000482257 STAG3Q9UJ98 1225 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms