RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 VWDEQ8N2E2 1590 aa25.83■■□□□ 1.73
CHRD-213ENST00000482014 GPATCH8Q9UKJ3 1502 aaKnown RBP25.83■■□□□ 1.72
CHRD-213ENST00000482014 CFDP1Q9UEE9 299 aaPredicted RBP25.8■■□□□ 1.72
CHRD-213ENST00000482014 NPHP4O75161 1426 aaPredicted RBP25.8■■□□□ 1.72
CHRD-213ENST00000482014 RGS17Q9UGC6 210 aaPredicted RBP25.79■■□□□ 1.72
CHRD-213ENST00000482014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.79■■□□□ 1.72
CHRD-213ENST00000482014 MED14O60244 1454 aa25.79■■□□□ 1.72
CHRD-213ENST00000482014 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
CHRD-213ENST00000482014 ADGBQ8N7X0 1667 aa25.77■■□□□ 1.72
CHRD-213ENST00000482014 FBXO31Q5XUX0 539 aaPredicted RBP25.76■■□□□ 1.71
CHRD-213ENST00000482014 PZPP20742 1482 aa25.75■■□□□ 1.71
CHRD-213ENST00000482014 DEPDC5O75140 1603 aa25.74■■□□□ 1.71
CHRD-213ENST00000482014 NLRP1Q9C000 1473 aa25.74■■□□□ 1.71
CHRD-213ENST00000482014 FAM135AQ9P2D6 1515 aa25.73■■□□□ 1.71
CHRD-213ENST00000482014 LRRC7Q96NW7 1537 aa25.72■■□□□ 1.71
CHRD-213ENST00000482014 DHX29Q7Z478 1369 aaKnown RBP25.71■■□□□ 1.71
CHRD-213ENST00000482014 RNF17Q9BXT8 1623 aaKnown RBP25.71■■□□□ 1.71
CHRD-213ENST00000482014 MIA2Q96PC5 1412 aa25.71■■□□□ 1.71
CHRD-213ENST00000482014 CCNB3Q8WWL7 1395 aa25.7■■□□□ 1.71
CHRD-213ENST00000482014 UGGT1Q9NYU2 1555 aa25.7■■□□□ 1.71
CHRD-213ENST00000482014 RTEL1-TNFRSF6BF6WH68 1400 aa25.69■■□□□ 1.7
CHRD-213ENST00000482014 KDM5DQ9BY66 1539 aa25.68■■□□□ 1.7
CHRD-213ENST00000482014 FYCO1Q9BQS8 1478 aa25.68■■□□□ 1.7
CHRD-213ENST00000482014 SYNMO15061 1565 aa25.68■■□□□ 1.7
CHRD-213ENST00000482014 WASHC2CQ9Y4E1 1318 aa25.67■■□□□ 1.7
CHRD-213ENST00000482014 KIF3BO15066 747 aa25.66■■□□□ 1.7
CHRD-213ENST00000482014 IQGAP1P46940 1657 aa25.65■■□□□ 1.7
CHRD-213ENST00000482014 POTEAQ6S8J7 498 aa25.61■■□□□ 1.69
CHRD-213ENST00000482014 MBD5Q9P267 1494 aa25.59■■□□□ 1.69
CHRD-213ENST00000482014 STRCP1A6NGW2 1772 aa25.57■■□□□ 1.68
CHRD-213ENST00000482014 ZNF644Q9H582 1327 aaPredicted RBP25.56■■□□□ 1.68
CHRD-213ENST00000482014 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
CHRD-213ENST00000482014 MTUS2Q5JR59 1369 aa25.54■■□□□ 1.68
CHRD-213ENST00000482014 RSPH4AQ5TD94 716 aa25.51■■□□□ 1.67
CHRD-213ENST00000482014 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
CHRD-213ENST00000482014 CCDC141Q6ZP82 1450 aa25.46■■□□□ 1.67
CHRD-213ENST00000482014 ZC3H13Q5T200 1668 aaKnown RBP25.45■■□□□ 1.66
CHRD-213ENST00000482014 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
CHRD-213ENST00000482014 TXNDC2Q86VQ3 553 aa25.41■■□□□ 1.66
CHRD-213ENST00000482014 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
CHRD-213ENST00000482014 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
CHRD-213ENST00000482014 EID1Q9Y6B2 187 aa25.39■■□□□ 1.66
CHRD-213ENST00000482014 TSPY4P0CV99 314 aa25.37■■□□□ 1.65
CHRD-213ENST00000482014 TSPY10P0CW01 314 aa25.37■■□□□ 1.65
CHRD-213ENST00000482014 LTKP29376 864 aa25.37■■□□□ 1.65
CHRD-213ENST00000482014 ABCC3O15438 1527 aa25.37■■□□□ 1.65
CHRD-213ENST00000482014 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
CHRD-213ENST00000482014 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
CHRD-213ENST00000482014 SLIT1O75093 1534 aa25.35■■□□□ 1.65
CHRD-213ENST00000482014 EHBP1L1Q8N3D4 1523 aa25.35■■□□□ 1.65
CHRD-213ENST00000482014 TMEM94Q12767 1356 aa25.34■■□□□ 1.65
CHRD-213ENST00000482014 LRRC9Q6ZRR7 1453 aa25.34■■□□□ 1.65
CHRD-213ENST00000482014 SETD1AO15047 1707 aaKnown RBP25.33■■□□□ 1.65
CHRD-213ENST00000482014 UBR1Q8IWV7 1749 aa25.33■■□□□ 1.65
CHRD-213ENST00000482014 UPF1Q92900 1129 aaKnown RBP eCLIP25.33■■□□□ 1.65
CHRD-213ENST00000482014 NCOA2Q15596 1464 aa25.33■■□□□ 1.65
CHRD-213ENST00000482014 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
CHRD-213ENST00000482014 CAMSAP2Q08AD1 1489 aa25.31■■□□□ 1.64
CHRD-213ENST00000482014 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
CHRD-213ENST00000482014 JCADQ9P266 1359 aa25.31■■□□□ 1.64
CHRD-213ENST00000482014 KCNA6P17658 529 aa25.29■■□□□ 1.64
CHRD-213ENST00000482014 ZNF772Q68DY9 489 aaPredicted RBP25.26■■□□□ 1.63
CHRD-213ENST00000482014 PROSER2Q86WR7 435 aaPredicted RBP25.26■■□□□ 1.63
CHRD-213ENST00000482014 ARHGEF5Q12774 1597 aa25.25■■□□□ 1.63
CHRD-213ENST00000482014 TMEM2Q9UHN6 1383 aa25.23■■□□□ 1.63
CHRD-213ENST00000482014 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
CHRD-213ENST00000482014 MSH6P52701 1360 aa25.21■■□□□ 1.63
CHRD-213ENST00000482014 EIF2AK4Q9P2K8 1649 aaKnown RBP25.21■■□□□ 1.63
CHRD-213ENST00000482014 SLAIN2Q9P270 581 aa25.2■■□□□ 1.62
CHRD-213ENST00000482014 STAG3Q9UJ98 1225 aa25.2■■□□□ 1.62
CHRD-213ENST00000482014 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.62
CHRD-213ENST00000482014 SPATA31A6Q5VVP1 1343 aa25.19■■□□□ 1.62
CHRD-213ENST00000482014 PRDM15P57071 1507 aaPredicted RBP25.19■■□□□ 1.62
CHRD-213ENST00000482014 MEX3CQ5U5Q3 659 aaKnown RBP25.18■■□□□ 1.62
CHRD-213ENST00000482014 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
CHRD-213ENST00000482014 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
CHRD-213ENST00000482014 PHLPP1O60346 1717 aa25.17■■□□□ 1.62
CHRD-213ENST00000482014 MROH1Q8NDA8 1641 aa25.15■■□□□ 1.62
CHRD-213ENST00000482014 RBM33Q96EV2 1170 aaKnown RBP25.15■■□□□ 1.62
CHRD-213ENST00000482014 CFAP65Q6ZU64 1925 aaKnown RBP25.15■■□□□ 1.62
CHRD-213ENST00000482014 MAST1Q9Y2H9 1570 aa25.14■■□□□ 1.62
CHRD-213ENST00000482014 FGD6Q6ZV73 1430 aa25.14■■□□□ 1.62
CHRD-213ENST00000482014 VPS8Q8N3P4 1428 aa25.13■■□□□ 1.61
CHRD-213ENST00000482014 RXRBP28702 533 aa25.13■■□□□ 1.61
CHRD-213ENST00000482014 SLC26A8Q96RN1 970 aa25.13■■□□□ 1.61
CHRD-213ENST00000482014 CEP152O94986 1710 aa25.12■■□□□ 1.61
CHRD-213ENST00000482014 TET3O43151 1660 aa25.1■■□□□ 1.61
CHRD-213ENST00000482014 PIK3C2BO00750 1634 aa25.09■■□□□ 1.61
CHRD-213ENST00000482014 EFCAB6Q5THR3 1501 aa25.09■■□□□ 1.61
CHRD-213ENST00000482014 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
CHRD-213ENST00000482014 CDK12Q9NYV4 1490 aaPredicted RBP25.09■■□□□ 1.61
CHRD-213ENST00000482014 LRP6O75581 1613 aa25.08■■□□□ 1.61
CHRD-213ENST00000482014 KDM5AP29375 1690 aaKnown RBP25.07■■□□□ 1.6
CHRD-213ENST00000482014 COL16A1Q07092 1604 aaPredicted RBP25.07■■□□□ 1.6
CHRD-213ENST00000482014 DUOX2Q9NRD8 1548 aa25.07■■□□□ 1.6
CHRD-213ENST00000482014 IDI1Q13907 227 aa25.04■■□□□ 1.6
CHRD-213ENST00000482014 BCANQ96GW7 911 aa25.03■■□□□ 1.6
CHRD-213ENST00000482014 NCOA3Q9Y6Q9 1424 aa25.02■■□□□ 1.6
CHRD-213ENST00000482014 KANK1Q14678 1352 aa25■■□□□ 1.59
CHRD-213ENST00000482014 SRCAPQ6ZRS2 3230 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms