RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 RTN4Q9NQC3 1192 aaKnown RBP18.96■□□□□ 0.63
CCDC78-211ENST00000481804 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
CCDC78-211ENST00000481804 DAXXQ9UER7 740 aaPredicted RBP18.96■□□□□ 0.63
CCDC78-211ENST00000481804 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
CCDC78-211ENST00000481804 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
CCDC78-211ENST00000481804 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
CCDC78-211ENST00000481804 MS4A1P11836 297 aa18.95■□□□□ 0.62
CCDC78-211ENST00000481804 KIAA0556O60303 1618 aa18.95■□□□□ 0.62
CCDC78-211ENST00000481804 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
CCDC78-211ENST00000481804 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-211ENST00000481804 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
CCDC78-211ENST00000481804 PLEKHD1A6NEE1 506 aa18.94■□□□□ 0.62
CCDC78-211ENST00000481804 UHRF1BP1Q6BDS2 1440 aa18.94■□□□□ 0.62
CCDC78-211ENST00000481804 IL27Q8NEV9 243 aa18.92■□□□□ 0.62
CCDC78-211ENST00000481804 SKAP1Q86WV1 359 aa18.91■□□□□ 0.62
CCDC78-211ENST00000481804 PLB1Q6P1J6 1458 aa18.91■□□□□ 0.62
CCDC78-211ENST00000481804 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
CCDC78-211ENST00000481804 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
CCDC78-211ENST00000481804 ADGBQ8N7X0 1667 aa18.9■□□□□ 0.62
CCDC78-211ENST00000481804 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
CCDC78-211ENST00000481804 ADGRL2O95490 1459 aa18.89■□□□□ 0.62
CCDC78-211ENST00000481804 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
CCDC78-211ENST00000481804 C9orf84Q5VXU9 1444 aa18.89■□□□□ 0.61
CCDC78-211ENST00000481804 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC78-211ENST00000481804 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
CCDC78-211ENST00000481804 ARHGEF12Q9NZN5 1544 aa18.87■□□□□ 0.61
CCDC78-211ENST00000481804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC78-211ENST00000481804 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
CCDC78-211ENST00000481804 PARD3Q8TEW0 1356 aa18.85■□□□□ 0.61
CCDC78-211ENST00000481804 PANK3Q9H999 370 aa18.84■□□□□ 0.61
CCDC78-211ENST00000481804 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
CCDC78-211ENST00000481804 ANO8Q9HCE9 1232 aaPredicted RBP18.83■□□□□ 0.61
CCDC78-211ENST00000481804 SLC4A3P48751 1232 aa18.82■□□□□ 0.6
CCDC78-211ENST00000481804 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
CCDC78-211ENST00000481804 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
CCDC78-211ENST00000481804 PER1O15534 1290 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-211ENST00000481804 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC78-211ENST00000481804 C20orf194Q5TEA3 1177 aa18.79■□□□□ 0.6
CCDC78-211ENST00000481804 TMF1P82094 1093 aa18.79■□□□□ 0.6
CCDC78-211ENST00000481804 CROCC2H7BZ55 1655 aa18.78■□□□□ 0.6
CCDC78-211ENST00000481804 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
CCDC78-211ENST00000481804 RGS3P49796 1198 aa18.76■□□□□ 0.59
CCDC78-211ENST00000481804 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
CCDC78-211ENST00000481804 WASHC2CQ9Y4E1 1318 aa18.75■□□□□ 0.59
CCDC78-211ENST00000481804 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
CCDC78-211ENST00000481804 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-211ENST00000481804 MAGI1Q96QZ7 1491 aaPredicted RBP18.74■□□□□ 0.59
CCDC78-211ENST00000481804 DISP3Q9P2K9 1392 aa18.74■□□□□ 0.59
CCDC78-211ENST00000481804 NFKBIBQ15653 356 aa18.74■□□□□ 0.59
CCDC78-211ENST00000481804 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
CCDC78-211ENST00000481804 GSE1Q14687 1217 aa18.74■□□□□ 0.59
CCDC78-211ENST00000481804 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
CCDC78-211ENST00000481804 SHANK2Q9UPX8 1470 aa18.73■□□□□ 0.59
CCDC78-211ENST00000481804 E9PCH4 1651 aa18.71■□□□□ 0.59
CCDC78-211ENST00000481804 FAM161AQ3B820 660 aa18.7■□□□□ 0.58
CCDC78-211ENST00000481804 TESK2Q96S53 571 aa18.7■□□□□ 0.58
CCDC78-211ENST00000481804 BLMP54132 1417 aaPredicted RBP18.7■□□□□ 0.58
CCDC78-211ENST00000481804 ERBINQ96RT1 1412 aa18.7■□□□□ 0.58
CCDC78-211ENST00000481804 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
CCDC78-211ENST00000481804 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
CCDC78-211ENST00000481804 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
CCDC78-211ENST00000481804 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
CCDC78-211ENST00000481804 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
CCDC78-211ENST00000481804 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
CCDC78-211ENST00000481804 KDM5DQ9BY66 1539 aa18.68■□□□□ 0.58
CCDC78-211ENST00000481804 PTPRGP23470 1445 aa18.67■□□□□ 0.58
CCDC78-211ENST00000481804 PLEKHH2Q8IVE3 1493 aa18.67■□□□□ 0.58
CCDC78-211ENST00000481804 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CCDC78-211ENST00000481804 NUP160Q12769 1436 aa18.66■□□□□ 0.58
CCDC78-211ENST00000481804 FRAT1Q92837 279 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-211ENST00000481804 ATP10BO94823 1461 aa18.65■□□□□ 0.58
CCDC78-211ENST00000481804 KDM2BQ8NHM5 1336 aa18.64■□□□□ 0.58
CCDC78-211ENST00000481804 DUSP27Q5VZP5 1158 aa18.64■□□□□ 0.58
CCDC78-211ENST00000481804 ABCC10Q5T3U5 1492 aa18.64■□□□□ 0.57
CCDC78-211ENST00000481804 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
CCDC78-211ENST00000481804 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
CCDC78-211ENST00000481804 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.57
CCDC78-211ENST00000481804 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-211ENST00000481804 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
CCDC78-211ENST00000481804 CCDC141Q6ZP82 1450 aa18.63■□□□□ 0.57
CCDC78-211ENST00000481804 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
CCDC78-211ENST00000481804 GPRASP1Q5JY77 1395 aa18.63■□□□□ 0.57
CCDC78-211ENST00000481804 A2MP01023 1474 aa18.63■□□□□ 0.57
CCDC78-211ENST00000481804 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
CCDC78-211ENST00000481804 INSRP06213 1382 aa18.62■□□□□ 0.57
CCDC78-211ENST00000481804 C8orf34Q49A92 452 aa18.61■□□□□ 0.57
CCDC78-211ENST00000481804 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
CCDC78-211ENST00000481804 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
CCDC78-211ENST00000481804 CDCA8Q53HL2 280 aa18.58■□□□□ 0.57
CCDC78-211ENST00000481804 APAF1O14727 1248 aa18.57■□□□□ 0.56
CCDC78-211ENST00000481804 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
CCDC78-211ENST00000481804 EIF5BO60841 1220 aaKnown RBP18.55■□□□□ 0.56
CCDC78-211ENST00000481804 SLFN5Q08AF3 891 aa18.55■□□□□ 0.56
CCDC78-211ENST00000481804 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
CCDC78-211ENST00000481804 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
CCDC78-211ENST00000481804 BCAR3O75815 825 aa18.55■□□□□ 0.56
CCDC78-211ENST00000481804 AMER1Q5JTC6 1135 aaPredicted RBP18.53■□□□□ 0.56
CCDC78-211ENST00000481804 ABCA8O94911 1581 aa18.53■□□□□ 0.56
CCDC78-211ENST00000481804 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
CCDC78-211ENST00000481804 EIF2AK4Q9P2K8 1649 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms