RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 ARXQ96QS3 562 aa15.16■□□□□ 0.02
PDCD4-206ENST00000481353 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
PDCD4-206ENST00000481353 PSEN2P49810 448 aa15.15■□□□□ 0.02
PDCD4-206ENST00000481353 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
PDCD4-206ENST00000481353 PDIA6Q15084 440 aa15.15■□□□□ 0.02
PDCD4-206ENST00000481353 DMRTA1Q5VZB9 504 aa15.13■□□□□ 0.01
PDCD4-206ENST00000481353 FOSBP53539 338 aa15.12■□□□□ 0.01
PDCD4-206ENST00000481353 ZNF454Q8N9F8 522 aa15.12■□□□□ 0.01
PDCD4-206ENST00000481353 LSM11P83369 360 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDCD4-206ENST00000481353 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
PDCD4-206ENST00000481353 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
PDCD4-206ENST00000481353 PPP4R3BQ5MIZ7 849 aa15.07■□□□□ 0
PDCD4-206ENST00000481353 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
PDCD4-206ENST00000481353 ADAM33Q9BZ11 813 aa15.05■□□□□ -0
PDCD4-206ENST00000481353 PCDHGA10Q9Y5H3 936 aa15.05■□□□□ -0
PDCD4-206ENST00000481353 ARHGAP33O14559 1287 aa15.04■□□□□ -0
PDCD4-206ENST00000481353 JPH4Q96JJ6 628 aa15.04■□□□□ -0
PDCD4-206ENST00000481353 KCNK17Q96T54 332 aa15.04■□□□□ -0
PDCD4-206ENST00000481353 PSDA5PKW4 1024 aaPredicted RBP15.03■□□□□ -0
PDCD4-206ENST00000481353 PBX2P40425 430 aa15.03■□□□□ -0
PDCD4-206ENST00000481353 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
PDCD4-206ENST00000481353 TRIM66O15016 1216 aa15□□□□□ -0.01
PDCD4-206ENST00000481353 GPR37O15354 613 aa14.99□□□□□ -0.01
PDCD4-206ENST00000481353 DDX12PQ92771 950 aa14.99□□□□□ -0.01
PDCD4-206ENST00000481353 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
PDCD4-206ENST00000481353 KDM4CQ9H3R0 1056 aa14.98□□□□□ -0.01
PDCD4-206ENST00000481353 BCL2L12Q9HB09 334 aa14.98□□□□□ -0.01
PDCD4-206ENST00000481353 PDE4DQ08499 809 aa14.96□□□□□ -0.01
PDCD4-206ENST00000481353 ZDHHC16Q969W1 377 aa14.96□□□□□ -0.01
PDCD4-206ENST00000481353 ADGRD1Q6QNK2 874 aa14.95□□□□□ -0.02
PDCD4-206ENST00000481353 COL9A1P20849 921 aa14.93□□□□□ -0.02
PDCD4-206ENST00000481353 HRO43593 1189 aa14.91□□□□□ -0.02
PDCD4-206ENST00000481353 IL27Q8NEV9 243 aa14.91□□□□□ -0.02
PDCD4-206ENST00000481353 MYT1LQ9UL68 1186 aa14.91□□□□□ -0.02
PDCD4-206ENST00000481353 PHF14O94880 888 aa14.9□□□□□ -0.02
PDCD4-206ENST00000481353 PTGER2P43116 358 aa14.89□□□□□ -0.03
PDCD4-206ENST00000481353 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
PDCD4-206ENST00000481353 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
PDCD4-206ENST00000481353 TYW1BQ6NUM6 668 aa14.87□□□□□ -0.03
PDCD4-206ENST00000481353 HOMEZQ8IX15 550 aa14.87□□□□□ -0.03
PDCD4-206ENST00000481353 RNF166Q96A37 237 aaPredicted RBP14.87□□□□□ -0.03
PDCD4-206ENST00000481353 VPS9D1Q9Y2B5 631 aa14.87□□□□□ -0.03
PDCD4-206ENST00000481353 PTPREP23469 700 aa14.86□□□□□ -0.03
PDCD4-206ENST00000481353 MAP2K5Q13163 448 aa14.86□□□□□ -0.03
PDCD4-206ENST00000481353 ZBED2Q9BTP6 218 aa14.86□□□□□ -0.03
PDCD4-206ENST00000481353 GRXCR2A6NFK2 248 aa14.85□□□□□ -0.03
PDCD4-206ENST00000481353 OSBPP22059 807 aa14.84□□□□□ -0.03
PDCD4-206ENST00000481353 TSR1Q2NL82 804 aaKnown RBP14.84□□□□□ -0.03
PDCD4-206ENST00000481353 PROX2Q3B8N5 592 aa14.84□□□□□ -0.03
PDCD4-206ENST00000481353 TK2O00142 265 aa14.83□□□□□ -0.04
PDCD4-206ENST00000481353 NUTM2FA1L443 756 aa14.82□□□□□ -0.04
PDCD4-206ENST00000481353 IRF6O14896 467 aa14.8□□□□□ -0.04
PDCD4-206ENST00000481353 AMHR2Q16671 573 aa14.8□□□□□ -0.04
PDCD4-206ENST00000481353 C6orf132Q5T0Z8 1188 aa14.8□□□□□ -0.04
PDCD4-206ENST00000481353 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
PDCD4-206ENST00000481353 GNPATO15228 680 aa14.79□□□□□ -0.04
PDCD4-206ENST00000481353 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
PDCD4-206ENST00000481353 HIC1Q14526 733 aa14.78□□□□□ -0.04
PDCD4-206ENST00000481353 FBXW7Q969H0 707 aa14.78□□□□□ -0.04
PDCD4-206ENST00000481353 EPAS1Q99814 870 aa14.78□□□□□ -0.04
PDCD4-206ENST00000481353 PPP1R3GB7ZBB8 358 aa14.77□□□□□ -0.05
PDCD4-206ENST00000481353 EN1Q05925 392 aaPredicted RBP14.77□□□□□ -0.05
PDCD4-206ENST00000481353 FAM117AQ9C073 453 aa14.77□□□□□ -0.05
PDCD4-206ENST00000481353 BHMG1C9JSJ3 638 aaPredicted RBP14.76□□□□□ -0.05
PDCD4-206ENST00000481353 FCHSD2O94868 740 aa14.76□□□□□ -0.05
PDCD4-206ENST00000481353 CDHR5Q9HBB8 845 aa14.76□□□□□ -0.05
PDCD4-206ENST00000481353 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
PDCD4-206ENST00000481353 SLC4A5Q9BY07 1137 aa14.75□□□□□ -0.05
PDCD4-206ENST00000481353 MAP3K7O43318 606 aa14.72□□□□□ -0.05
PDCD4-206ENST00000481353 PARP9Q8IXQ6 854 aa14.72□□□□□ -0.05
PDCD4-206ENST00000481353 KCNH8Q96L42 1107 aa14.72□□□□□ -0.05
PDCD4-206ENST00000481353 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
PDCD4-206ENST00000481353 ZMYND15Q9H091 742 aa14.7□□□□□ -0.06
PDCD4-206ENST00000481353 C3orf80F5H4A9 247 aa14.69□□□□□ -0.06
PDCD4-206ENST00000481353 FECHP22830 423 aa14.68□□□□□ -0.06
PDCD4-206ENST00000481353 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
PDCD4-206ENST00000481353 PTGDRQ13258 359 aa14.67□□□□□ -0.06
PDCD4-206ENST00000481353 KCTD12Q96CX2 325 aaKnown RBP14.67□□□□□ -0.06
PDCD4-206ENST00000481353 KIAA1468Q9P260 1216 aa14.65□□□□□ -0.06
PDCD4-206ENST00000481353 TSKSQ9UJT2 592 aa14.65□□□□□ -0.06
PDCD4-206ENST00000481353 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
PDCD4-206ENST00000481353 SEPT9Q9UHD8 586 aaPredicted RBP14.63□□□□□ -0.07
PDCD4-206ENST00000481353 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
PDCD4-206ENST00000481353 NPDC1Q9NQX5 325 aaPredicted RBP14.62□□□□□ -0.07
PDCD4-206ENST00000481353 TRIM6-TRIM34B2RNG4 842 aa14.61□□□□□ -0.07
PDCD4-206ENST00000481353 RABGEF1Q9UJ41 708 aa14.6□□□□□ -0.07
PDCD4-206ENST00000481353 TTLL12Q14166 644 aaPredicted RBP14.59□□□□□ -0.07
PDCD4-206ENST00000481353 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
PDCD4-206ENST00000481353 SMAPO00193 183 aa14.56□□□□□ -0.08
PDCD4-206ENST00000481353 CDCA7LQ96GN5 454 aa14.56□□□□□ -0.08
PDCD4-206ENST00000481353 GIGYF2Q6Y7W6 1299 aaKnown RBP14.54□□□□□ -0.08
PDCD4-206ENST00000481353 STAC3Q96MF2 364 aa14.54□□□□□ -0.08
PDCD4-206ENST00000481353 PRSS12P56730 875 aa14.53□□□□□ -0.08
PDCD4-206ENST00000481353 PTPN5P54829 565 aa14.52□□□□□ -0.09
PDCD4-206ENST00000481353 FLIIQ13045 1269 aa14.52□□□□□ -0.09
PDCD4-206ENST00000481353 THSD4Q6ZMP0 1018 aa14.52□□□□□ -0.09
PDCD4-206ENST00000481353 WNT2BQ93097 391 aa14.52□□□□□ -0.09
PDCD4-206ENST00000481353 NBPF3Q9H094 633 aa14.52□□□□□ -0.09
PDCD4-206ENST00000481353 MS4A1P11836 297 aa14.5□□□□□ -0.09
PDCD4-206ENST00000481353 BCAMP50895 628 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms