RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
ABCF3-215ENST00000481116 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
ABCF3-215ENST00000481116 STRCQ7RTU9 1775 aa19.94■□□□□ 0.78
ABCF3-215ENST00000481116 RRP7BPQ9NSQ0 103 aa19.94■□□□□ 0.78
ABCF3-215ENST00000481116 KDM5DQ9BY66 1539 aa19.93■□□□□ 0.78
ABCF3-215ENST00000481116 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
ABCF3-215ENST00000481116 CEP152O94986 1710 aa19.93■□□□□ 0.78
ABCF3-215ENST00000481116 PTPRKQ15262 1439 aa19.93■□□□□ 0.78
ABCF3-215ENST00000481116 CFAP65Q6ZU64 1925 aaKnown RBP19.92■□□□□ 0.78
ABCF3-215ENST00000481116 KIF15Q9NS87 1388 aa19.92■□□□□ 0.78
ABCF3-215ENST00000481116 NPATQ14207 1427 aa19.92■□□□□ 0.78
ABCF3-215ENST00000481116 MYO3AQ8NEV4 1616 aa19.91■□□□□ 0.78
ABCF3-215ENST00000481116 WASHC2CQ9Y4E1 1318 aa19.91■□□□□ 0.78
ABCF3-215ENST00000481116 MROH1Q8NDA8 1641 aa19.91■□□□□ 0.78
ABCF3-215ENST00000481116 FBXO31Q5XUX0 539 aaPredicted RBP19.88■□□□□ 0.77
ABCF3-215ENST00000481116 FAM135AQ9P2D6 1515 aa19.87■□□□□ 0.77
ABCF3-215ENST00000481116 ZNF142P52746 1687 aaPredicted RBP19.87■□□□□ 0.77
ABCF3-215ENST00000481116 ZC3H13Q5T200 1668 aaKnown RBP19.87■□□□□ 0.77
ABCF3-215ENST00000481116 ABCC3O15438 1527 aa19.86■□□□□ 0.77
ABCF3-215ENST00000481116 ANKRD30AQ9BXX3 1397 aa19.85■□□□□ 0.77
ABCF3-215ENST00000481116 PZPP20742 1482 aa19.84■□□□□ 0.77
ABCF3-215ENST00000481116 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
ABCF3-215ENST00000481116 ERBINQ96RT1 1412 aa19.84■□□□□ 0.77
ABCF3-215ENST00000481116 CAMSAP1Q5T5Y3 1602 aa19.84■□□□□ 0.77
ABCF3-215ENST00000481116 CEP170BQ9Y4F5 1589 aaPredicted RBP19.83■□□□□ 0.77
ABCF3-215ENST00000481116 DEPDC5O75140 1603 aa19.83■□□□□ 0.76
ABCF3-215ENST00000481116 ADGRL2O95490 1459 aa19.82■□□□□ 0.76
ABCF3-215ENST00000481116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.76
ABCF3-215ENST00000481116 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
ABCF3-215ENST00000481116 TNRQ92752 1358 aa19.8■□□□□ 0.76
ABCF3-215ENST00000481116 ITGAEP38570 1179 aa19.78■□□□□ 0.76
ABCF3-215ENST00000481116 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
ABCF3-215ENST00000481116 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
ABCF3-215ENST00000481116 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
ABCF3-215ENST00000481116 SPATA31D1Q6ZQQ2 1576 aa19.74■□□□□ 0.75
ABCF3-215ENST00000481116 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
ABCF3-215ENST00000481116 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
ABCF3-215ENST00000481116 ANKRD50Q9ULJ7 1429 aa19.73■□□□□ 0.75
ABCF3-215ENST00000481116 VWDEQ8N2E2 1590 aa19.72■□□□□ 0.75
ABCF3-215ENST00000481116 KANK1Q14678 1352 aa19.71■□□□□ 0.75
ABCF3-215ENST00000481116 PTPRTO14522 1441 aa19.71■□□□□ 0.75
ABCF3-215ENST00000481116 POLR1AO95602 1720 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-215ENST00000481116 PLA2R1Q13018 1463 aa19.7■□□□□ 0.74
ABCF3-215ENST00000481116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
ABCF3-215ENST00000481116 UGGT1Q9NYU2 1555 aa19.69■□□□□ 0.74
ABCF3-215ENST00000481116 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
ABCF3-215ENST00000481116 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
ABCF3-215ENST00000481116 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
ABCF3-215ENST00000481116 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
ABCF3-215ENST00000481116 ROCK1Q13464 1354 aa19.67■□□□□ 0.74
ABCF3-215ENST00000481116 UBR1Q8IWV7 1749 aa19.66■□□□□ 0.74
ABCF3-215ENST00000481116 UNC13BO14795 1591 aa19.66■□□□□ 0.74
ABCF3-215ENST00000481116 PKD2Q13563 968 aa19.64■□□□□ 0.73
ABCF3-215ENST00000481116 CERKQ8TCT0 537 aa19.64■□□□□ 0.73
ABCF3-215ENST00000481116 EFCAB6Q5THR3 1501 aa19.64■□□□□ 0.73
ABCF3-215ENST00000481116 NEURL4Q96JN8 1562 aa19.64■□□□□ 0.73
ABCF3-215ENST00000481116 TET3O43151 1660 aa19.62■□□□□ 0.73
ABCF3-215ENST00000481116 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
ABCF3-215ENST00000481116 PIK3C2BO00750 1634 aa19.62■□□□□ 0.73
ABCF3-215ENST00000481116 THEMISQ8N1K5 641 aaPredicted RBP19.62■□□□□ 0.73
ABCF3-215ENST00000481116 SYNMO15061 1565 aa19.61■□□□□ 0.73
ABCF3-215ENST00000481116 FBXO41Q8TF61 875 aa19.6■□□□□ 0.73
ABCF3-215ENST00000481116 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
ABCF3-215ENST00000481116 E9PCH4 1651 aa19.59■□□□□ 0.73
ABCF3-215ENST00000481116 IQGAP3Q86VI3 1631 aa19.58■□□□□ 0.73
ABCF3-215ENST00000481116 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
ABCF3-215ENST00000481116 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
ABCF3-215ENST00000481116 MYO5BQ9ULV0 1848 aa19.57■□□□□ 0.72
ABCF3-215ENST00000481116 NOS1P29475 1434 aa19.56■□□□□ 0.72
ABCF3-215ENST00000481116 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
ABCF3-215ENST00000481116 IDI1Q13907 227 aa19.54■□□□□ 0.72
ABCF3-215ENST00000481116 NUP155O75694 1391 aa19.53■□□□□ 0.72
ABCF3-215ENST00000481116 NPHP4O75161 1426 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-215ENST00000481116 MED14O60244 1454 aa19.52■□□□□ 0.72
ABCF3-215ENST00000481116 RPRD2Q5VT52 1461 aaKnown RBP19.52■□□□□ 0.72
ABCF3-215ENST00000481116 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.71
ABCF3-215ENST00000481116 NAIPQ13075 1403 aa19.51■□□□□ 0.71
ABCF3-215ENST00000481116 STAG3Q9UJ98 1225 aa19.51■□□□□ 0.71
ABCF3-215ENST00000481116 LTKP29376 864 aa19.5■□□□□ 0.71
ABCF3-215ENST00000481116 SLIT1O75093 1534 aa19.5■□□□□ 0.71
ABCF3-215ENST00000481116 ARHGAP23Q9P227 1491 aa19.49■□□□□ 0.71
ABCF3-215ENST00000481116 ADGRB3O60242 1522 aa19.48■□□□□ 0.71
ABCF3-215ENST00000481116 STRCP1A6NGW2 1772 aa19.47■□□□□ 0.71
ABCF3-215ENST00000481116 TXNDC2Q86VQ3 553 aa19.47■□□□□ 0.71
ABCF3-215ENST00000481116 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
ABCF3-215ENST00000481116 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
ABCF3-215ENST00000481116 TMEM2Q9UHN6 1383 aa19.45■□□□□ 0.7
ABCF3-215ENST00000481116 SPHKAPQ2M3C7 1700 aa19.45■□□□□ 0.7
ABCF3-215ENST00000481116 TMEM131LA2VDJ0 1609 aa19.44■□□□□ 0.7
ABCF3-215ENST00000481116 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
ABCF3-215ENST00000481116 EID1Q9Y6B2 187 aa19.43■□□□□ 0.7
ABCF3-215ENST00000481116 CHGAP10645 457 aaKnown RBP19.41■□□□□ 0.7
ABCF3-215ENST00000481116 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-215ENST00000481116 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
ABCF3-215ENST00000481116 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
ABCF3-215ENST00000481116 CPS1P31327 1500 aa19.38■□□□□ 0.69
ABCF3-215ENST00000481116 ZFYVE9O95405 1425 aa19.35■□□□□ 0.69
ABCF3-215ENST00000481116 RIMS2Q9UQ26 1411 aa19.35■□□□□ 0.69
ABCF3-215ENST00000481116 CLTCL1P53675 1640 aa19.34■□□□□ 0.69
ABCF3-215ENST00000481116 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms