RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PPP1R15BQ5SWA1 713 aa9.79□□□□□ -0.84
COPA-203ENST00000481040 GPIHBP1Q8IV16 184 aa9.79□□□□□ -0.84
COPA-203ENST00000481040 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
COPA-203ENST00000481040 RNF166Q96A37 237 aaPredicted RBP9.79□□□□□ -0.84
COPA-203ENST00000481040 RBM26Q5T8P6 1007 aaKnown RBP9.78□□□□□ -0.84
COPA-203ENST00000481040 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
COPA-203ENST00000481040 RSPH6AQ9H0K4 717 aa9.78□□□□□ -0.84
COPA-203ENST00000481040 KDM4CQ9H3R0 1056 aa9.78□□□□□ -0.84
COPA-203ENST00000481040 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
COPA-203ENST00000481040 PBX2P40425 430 aa9.75□□□□□ -0.85
COPA-203ENST00000481040 MLLT3P42568 568 aaPredicted RBP9.75□□□□□ -0.85
COPA-203ENST00000481040 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
COPA-203ENST00000481040 TRIM66O15016 1216 aa9.73□□□□□ -0.85
COPA-203ENST00000481040 PSEN2P49810 448 aa9.73□□□□□ -0.85
COPA-203ENST00000481040 PDE4DQ08499 809 aa9.73□□□□□ -0.85
COPA-203ENST00000481040 ARHGAP33O14559 1287 aa9.71□□□□□ -0.86
COPA-203ENST00000481040 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
COPA-203ENST00000481040 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
COPA-203ENST00000481040 TBC1D12O60347 775 aa9.69□□□□□ -0.86
COPA-203ENST00000481040 ADGRD1Q6QNK2 874 aa9.68□□□□□ -0.86
COPA-203ENST00000481040 PTGER2P43116 358 aa9.67□□□□□ -0.86
COPA-203ENST00000481040 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
COPA-203ENST00000481040 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
COPA-203ENST00000481040 HRO43593 1189 aa9.65□□□□□ -0.86
COPA-203ENST00000481040 ZNF454Q8N9F8 522 aa9.65□□□□□ -0.86
COPA-203ENST00000481040 FOSBP53539 338 aa9.64□□□□□ -0.87
COPA-203ENST00000481040 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
COPA-203ENST00000481040 ANO8Q9HCE9 1232 aaPredicted RBP9.64□□□□□ -0.87
COPA-203ENST00000481040 EVI5O60447 810 aa9.63□□□□□ -0.87
COPA-203ENST00000481040 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
COPA-203ENST00000481040 ARID3AQ99856 593 aa9.63□□□□□ -0.87
COPA-203ENST00000481040 FAM117AQ9C073 453 aa9.63□□□□□ -0.87
COPA-203ENST00000481040 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
COPA-203ENST00000481040 DPYSL4O14531 572 aa9.61□□□□□ -0.87
COPA-203ENST00000481040 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
COPA-203ENST00000481040 TK2O00142 265 aa9.6□□□□□ -0.87
COPA-203ENST00000481040 GPR37O15354 613 aa9.6□□□□□ -0.87
COPA-203ENST00000481040 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
COPA-203ENST00000481040 PDIA6Q15084 440 aa9.59□□□□□ -0.87
COPA-203ENST00000481040 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
COPA-203ENST00000481040 HRCP23327 699 aa9.58□□□□□ -0.88
COPA-203ENST00000481040 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
COPA-203ENST00000481040 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
COPA-203ENST00000481040 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
COPA-203ENST00000481040 PLEKHG3A1L390 1219 aa9.57□□□□□ -0.88
COPA-203ENST00000481040 VPS9D1Q9Y2B5 631 aa9.57□□□□□ -0.88
COPA-203ENST00000481040 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
COPA-203ENST00000481040 FLIIQ13045 1269 aa9.55□□□□□ -0.88
COPA-203ENST00000481040 PCDHGA10Q9Y5H3 936 aa9.55□□□□□ -0.88
COPA-203ENST00000481040 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
COPA-203ENST00000481040 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
COPA-203ENST00000481040 APBB1O00213 710 aa9.53□□□□□ -0.88
COPA-203ENST00000481040 MAP2K5Q13163 448 aa9.53□□□□□ -0.88
COPA-203ENST00000481040 AMHR2Q16671 573 aa9.53□□□□□ -0.88
COPA-203ENST00000481040 CCDC102AQ96A19 550 aa9.53□□□□□ -0.88
COPA-203ENST00000481040 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
COPA-203ENST00000481040 IRF6O14896 467 aa9.51□□□□□ -0.89
COPA-203ENST00000481040 PTPREP23469 700 aa9.51□□□□□ -0.89
COPA-203ENST00000481040 PARP9Q8IXQ6 854 aa9.51□□□□□ -0.89
COPA-203ENST00000481040 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
COPA-203ENST00000481040 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
COPA-203ENST00000481040 KCTD12Q96CX2 325 aaKnown RBP9.5□□□□□ -0.89
COPA-203ENST00000481040 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
COPA-203ENST00000481040 COL9A1P20849 921 aa9.49□□□□□ -0.89
COPA-203ENST00000481040 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
COPA-203ENST00000481040 GRXCR2A6NFK2 248 aa9.47□□□□□ -0.89
COPA-203ENST00000481040 ONECUT3O60422 494 aaPredicted RBP9.47□□□□□ -0.89
COPA-203ENST00000481040 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
COPA-203ENST00000481040 HCSTQ9UBK5 93 aa9.47□□□□□ -0.89
COPA-203ENST00000481040 GNPATO15228 680 aa9.46□□□□□ -0.9
COPA-203ENST00000481040 PROX2Q3B8N5 592 aa9.46□□□□□ -0.9
COPA-203ENST00000481040 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
COPA-203ENST00000481040 PHF14O94880 888 aa9.45□□□□□ -0.9
COPA-203ENST00000481040 A6NJR5 290 aa9.44□□□□□ -0.9
COPA-203ENST00000481040 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
COPA-203ENST00000481040 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
COPA-203ENST00000481040 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
COPA-203ENST00000481040 HIC1Q14526 733 aa9.43□□□□□ -0.9
COPA-203ENST00000481040 TRAK2O60296 914 aa9.42□□□□□ -0.9
COPA-203ENST00000481040 OSBPP22059 807 aa9.42□□□□□ -0.9
COPA-203ENST00000481040 FECHP22830 423 aa9.42□□□□□ -0.9
COPA-203ENST00000481040 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
COPA-203ENST00000481040 DDX12PQ92771 950 aa9.42□□□□□ -0.9
COPA-203ENST00000481040 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
COPA-203ENST00000481040 FCHSD2O94868 740 aa9.41□□□□□ -0.9
COPA-203ENST00000481040 CLUAP1Q96AJ1 413 aa9.41□□□□□ -0.9
COPA-203ENST00000481040 PCMTD1Q96MG8 357 aaPredicted RBP9.41□□□□□ -0.9
COPA-203ENST00000481040 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
COPA-203ENST00000481040 PTPN5P54829 565 aa9.4□□□□□ -0.9
COPA-203ENST00000481040 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
COPA-203ENST00000481040 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
COPA-203ENST00000481040 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
COPA-203ENST00000481040 C6orf132Q5T0Z8 1188 aa9.39□□□□□ -0.91
COPA-203ENST00000481040 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
COPA-203ENST00000481040 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
COPA-203ENST00000481040 STAC3Q96MF2 364 aa9.39□□□□□ -0.91
COPA-203ENST00000481040 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
COPA-203ENST00000481040 MS4A1P11836 297 aa9.37□□□□□ -0.91
COPA-203ENST00000481040 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
COPA-203ENST00000481040 EPAS1Q99814 870 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms