RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 KIF15Q9NS87 1388 aa31.05■■■□□ 2.56
VPS36-204ENST00000480923 DUOX2Q9NRD8 1548 aa31.03■■■□□ 2.56
VPS36-204ENST00000480923 WASHC2CQ9Y4E1 1318 aa31.02■■■□□ 2.56
VPS36-204ENST00000480923 NPATQ14207 1427 aa31.02■■■□□ 2.56
VPS36-204ENST00000480923 KDM5DQ9BY66 1539 aa31■■■□□ 2.55
VPS36-204ENST00000480923 ANKRD30AQ9BXX3 1397 aa31■■■□□ 2.55
VPS36-204ENST00000480923 FAM135AQ9P2D6 1515 aa30.98■■■□□ 2.55
VPS36-204ENST00000480923 EIF2AK4Q9P2K8 1649 aaKnown RBP30.98■■■□□ 2.55
VPS36-204ENST00000480923 SETD1BQ9UPS6 1966 aaKnown RBP30.97■■■□□ 2.55
VPS36-204ENST00000480923 PTPRKQ15262 1439 aa30.97■■■□□ 2.55
VPS36-204ENST00000480923 RNF17Q9BXT8 1623 aaKnown RBP30.95■■■□□ 2.55
VPS36-204ENST00000480923 ERBINQ96RT1 1412 aa30.95■■■□□ 2.54
VPS36-204ENST00000480923 NCOA1Q15788 1441 aa30.92■■■□□ 2.54
VPS36-204ENST00000480923 ADGRL2O95490 1459 aa30.89■■■□□ 2.54
VPS36-204ENST00000480923 PZPP20742 1482 aa30.88■■■□□ 2.53
VPS36-204ENST00000480923 FBXO31Q5XUX0 539 aaPredicted RBP30.87■■■□□ 2.53
VPS36-204ENST00000480923 ABCC3O15438 1527 aa30.87■■■□□ 2.53
VPS36-204ENST00000480923 MROH1Q8NDA8 1641 aa30.87■■■□□ 2.53
VPS36-204ENST00000480923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.85■■■□□ 2.53
VPS36-204ENST00000480923 ZC3H13Q5T200 1668 aaKnown RBP30.83■■■□□ 2.53
VPS36-204ENST00000480923 MYO3AQ8NEV4 1616 aa30.83■■■□□ 2.53
VPS36-204ENST00000480923 TNRQ92752 1358 aa30.82■■■□□ 2.52
VPS36-204ENST00000480923 ITGAEP38570 1179 aa30.82■■■□□ 2.52
VPS36-204ENST00000480923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.8■■■□□ 2.52
VPS36-204ENST00000480923 PRDM15P57071 1507 aaPredicted RBP30.8■■■□□ 2.52
VPS36-204ENST00000480923 KANK1Q14678 1352 aa30.79■■■□□ 2.52
VPS36-204ENST00000480923 CEP170BQ9Y4F5 1589 aaPredicted RBP30.77■■■□□ 2.52
VPS36-204ENST00000480923 ANKRD50Q9ULJ7 1429 aa30.76■■■□□ 2.51
VPS36-204ENST00000480923 CEP152O94986 1710 aa30.76■■■□□ 2.51
VPS36-204ENST00000480923 DMRT2Q9Y5R5 561 aa30.75■■■□□ 2.51
VPS36-204ENST00000480923 DEPDC5O75140 1603 aa30.75■■■□□ 2.51
VPS36-204ENST00000480923 ZNF142P52746 1687 aaPredicted RBP30.74■■■□□ 2.51
VPS36-204ENST00000480923 CAMSAP1Q5T5Y3 1602 aa30.74■■■□□ 2.51
VPS36-204ENST00000480923 ROCK1Q13464 1354 aa30.74■■■□□ 2.51
VPS36-204ENST00000480923 A2ML1A8K2U0 1454 aa30.74■■■□□ 2.51
VPS36-204ENST00000480923 STRCQ7RTU9 1775 aa30.72■■■□□ 2.51
VPS36-204ENST00000480923 RRBP1Q9P2E9 1410 aaKnown RBP30.72■■■□□ 2.51
VPS36-204ENST00000480923 ERVK-7P63135 1459 aa30.7■■■□□ 2.5
VPS36-204ENST00000480923 SPATA31D1Q6ZQQ2 1576 aa30.67■■■□□ 2.5
VPS36-204ENST00000480923 ARHGAP31Q2M1Z3 1444 aa30.67■■■□□ 2.5
VPS36-204ENST00000480923 NLRP1Q9C000 1473 aa30.67■■■□□ 2.5
VPS36-204ENST00000480923 NCKAP5LQ9HCH0 1330 aa30.66■■■□□ 2.5
VPS36-204ENST00000480923 PLA2R1Q13018 1463 aa30.64■■■□□ 2.5
VPS36-204ENST00000480923 VWDEQ8N2E2 1590 aa30.64■■■□□ 2.5
VPS36-204ENST00000480923 PTPRTO14522 1441 aa30.64■■■□□ 2.49
VPS36-204ENST00000480923 LMTK2Q8IWU2 1503 aa30.63■■■□□ 2.49
VPS36-204ENST00000480923 PKD2Q13563 968 aa30.61■■■□□ 2.49
VPS36-204ENST00000480923 UGGT1Q9NYU2 1555 aa30.58■■■□□ 2.49
VPS36-204ENST00000480923 THEMISQ8N1K5 641 aaPredicted RBP30.58■■■□□ 2.49
VPS36-204ENST00000480923 EFCAB6Q5THR3 1501 aa30.54■■■□□ 2.48
VPS36-204ENST00000480923 UNC13BO14795 1591 aa30.54■■■□□ 2.48
VPS36-204ENST00000480923 CFAP65Q6ZU64 1925 aaKnown RBP30.53■■■□□ 2.48
VPS36-204ENST00000480923 ILDR1Q86SU0 546 aaPredicted RBP30.53■■■□□ 2.48
VPS36-204ENST00000480923 ANKLE2Q86XL3 938 aa30.5■■■□□ 2.47
VPS36-204ENST00000480923 CERKQ8TCT0 537 aa30.48■■■□□ 2.47
VPS36-204ENST00000480923 NUP155O75694 1391 aa30.47■■■□□ 2.47
VPS36-204ENST00000480923 TET3O43151 1660 aa30.46■■■□□ 2.47
VPS36-204ENST00000480923 NOS1P29475 1434 aa30.45■■■□□ 2.46
VPS36-204ENST00000480923 RPRD2Q5VT52 1461 aaKnown RBP30.44■■■□□ 2.46
VPS36-204ENST00000480923 STAG3Q9UJ98 1225 aa30.44■■■□□ 2.46
VPS36-204ENST00000480923 NAIPQ13075 1403 aa30.42■■■□□ 2.46
VPS36-204ENST00000480923 FBXO41Q8TF61 875 aa30.42■■■□□ 2.46
VPS36-204ENST00000480923 SYNMO15061 1565 aa30.41■■■□□ 2.46
VPS36-204ENST00000480923 IDI1Q13907 227 aa30.41■■■□□ 2.46
VPS36-204ENST00000480923 POLR1AO95602 1720 aaPredicted RBP30.41■■■□□ 2.46
VPS36-204ENST00000480923 IQGAP3Q86VI3 1631 aa30.4■■■□□ 2.46
VPS36-204ENST00000480923 UBR1Q8IWV7 1749 aa30.4■■■□□ 2.46
VPS36-204ENST00000480923 NEURL4Q96JN8 1562 aa30.4■■■□□ 2.46
VPS36-204ENST00000480923 PIK3C2BO00750 1634 aa30.39■■■□□ 2.46
VPS36-204ENST00000480923 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.45
VPS36-204ENST00000480923 SLC52A1Q9NWF4 448 aa30.38■■■□□ 2.45
VPS36-204ENST00000480923 ZNF335Q9H4Z2 1342 aaPredicted RBP30.37■■■□□ 2.45
VPS36-204ENST00000480923 HFM1A2PYH4 1435 aa30.37■■■□□ 2.45
VPS36-204ENST00000480923 NPHP4O75161 1426 aaPredicted RBP30.37■■■□□ 2.45
VPS36-204ENST00000480923 LTBP4Q8N2S1 1624 aa30.34■■■□□ 2.45
VPS36-204ENST00000480923 MED14O60244 1454 aa30.33■■■□□ 2.45
VPS36-204ENST00000480923 TXNDC2Q86VQ3 553 aa30.32■■■□□ 2.44
VPS36-204ENST00000480923 E9PCH4 1651 aa30.32■■■□□ 2.44
VPS36-204ENST00000480923 SLIT1O75093 1534 aa30.32■■■□□ 2.44
VPS36-204ENST00000480923 ARHGAP23Q9P227 1491 aa30.31■■■□□ 2.44
VPS36-204ENST00000480923 EID1Q9Y6B2 187 aa30.31■■■□□ 2.44
VPS36-204ENST00000480923 SCAF11Q99590 1463 aaKnown RBP30.31■■■□□ 2.44
VPS36-204ENST00000480923 TMEM2Q9UHN6 1383 aa30.3■■■□□ 2.44
VPS36-204ENST00000480923 LTKP29376 864 aa30.29■■■□□ 2.44
VPS36-204ENST00000480923 ADGRB3O60242 1522 aa30.28■■■□□ 2.44
VPS36-204ENST00000480923 TRIM52Q96A61 297 aa30.28■■■□□ 2.44
VPS36-204ENST00000480923 KDM5AP29375 1690 aaKnown RBP30.27■■■□□ 2.44
VPS36-204ENST00000480923 IQGAP1P46940 1657 aa30.26■■■□□ 2.43
VPS36-204ENST00000480923 CHGAP10645 457 aaKnown RBP30.24■■■□□ 2.43
VPS36-204ENST00000480923 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
VPS36-204ENST00000480923 CPS1P31327 1500 aa30.14■■■□□ 2.42
VPS36-204ENST00000480923 SLC4A1APQ9BWU0 796 aaKnown RBP30.14■■■□□ 2.42
VPS36-204ENST00000480923 TMEM131LA2VDJ0 1609 aa30.14■■■□□ 2.41
VPS36-204ENST00000480923 HDGFP51858 240 aaKnown RBP30.12■■■□□ 2.41
VPS36-204ENST00000480923 RIMS2Q9UQ26 1411 aa30.12■■■□□ 2.41
VPS36-204ENST00000480923 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
VPS36-204ENST00000480923 BCANQ96GW7 911 aa30.11■■■□□ 2.41
VPS36-204ENST00000480923 SPHKAPQ2M3C7 1700 aa30.1■■■□□ 2.41
VPS36-204ENST00000480923 ZFYVE9O95405 1425 aa30.1■■■□□ 2.41
VPS36-204ENST00000480923 MYO5BQ9ULV0 1848 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms