RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-208ENST00000480209 ATP10AO60312 1499 aa13.47□□□□□ -0.25
NUDCD3-208ENST00000480209 CEP152O94986 1710 aa13.47□□□□□ -0.25
NUDCD3-208ENST00000480209 KDM5DQ9BY66 1539 aa13.46□□□□□ -0.25
NUDCD3-208ENST00000480209 IQGAP3Q86VI3 1631 aa13.46□□□□□ -0.26
NUDCD3-208ENST00000480209 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
NUDCD3-208ENST00000480209 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
NUDCD3-208ENST00000480209 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
NUDCD3-208ENST00000480209 AGLP35573 1532 aa13.44□□□□□ -0.26
NUDCD3-208ENST00000480209 PZPP20742 1482 aa13.43□□□□□ -0.26
NUDCD3-208ENST00000480209 FAM135AQ9P2D6 1515 aa13.41□□□□□ -0.26
NUDCD3-208ENST00000480209 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-208ENST00000480209 E9PCH4 1651 aa13.39□□□□□ -0.27
NUDCD3-208ENST00000480209 TET3O43151 1660 aa13.39□□□□□ -0.27
NUDCD3-208ENST00000480209 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
NUDCD3-208ENST00000480209 CLTCQ00610 1675 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-208ENST00000480209 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-208ENST00000480209 ABCC3O15438 1527 aa13.38□□□□□ -0.27
NUDCD3-208ENST00000480209 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
NUDCD3-208ENST00000480209 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
NUDCD3-208ENST00000480209 KIF3BO15066 747 aa13.36□□□□□ -0.27
NUDCD3-208ENST00000480209 LMTK2Q8IWU2 1503 aa13.35□□□□□ -0.27
NUDCD3-208ENST00000480209 HRCP23327 699 aa13.35□□□□□ -0.27
NUDCD3-208ENST00000480209 NUP155O75694 1391 aa13.34□□□□□ -0.27
NUDCD3-208ENST00000480209 MADDQ8WXG6 1647 aa13.33□□□□□ -0.28
NUDCD3-208ENST00000480209 MROH2AA6NES4 1674 aa13.33□□□□□ -0.28
NUDCD3-208ENST00000480209 SPHKAPQ2M3C7 1700 aa13.33□□□□□ -0.28
NUDCD3-208ENST00000480209 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-208ENST00000480209 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
NUDCD3-208ENST00000480209 FOXD1Q16676 465 aa13.32□□□□□ -0.28
NUDCD3-208ENST00000480209 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
NUDCD3-208ENST00000480209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■■□□□ 13.5
NUDCD3-208ENST00000480209 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-208ENST00000480209 GGT6Q6P531 493 aa13.3□□□□□ -0.28
NUDCD3-208ENST00000480209 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
NUDCD3-208ENST00000480209 C3P01024 1663 aa13.29□□□□□ -0.28
NUDCD3-208ENST00000480209 MLECQ14165 292 aa13.28□□□□□ -0.28
NUDCD3-208ENST00000480209 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
NUDCD3-208ENST00000480209 KANK1Q14678 1352 aa13.28□□□□□ -0.28
NUDCD3-208ENST00000480209 NPATQ14207 1427 aa13.28□□□□□ -0.28
NUDCD3-208ENST00000480209 SYNMO15061 1565 aa13.26□□□□□ -0.29
NUDCD3-208ENST00000480209 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
NUDCD3-208ENST00000480209 ARID4BQ4LE39 1312 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-208ENST00000480209 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-208ENST00000480209 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
NUDCD3-208ENST00000480209 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
NUDCD3-208ENST00000480209 TRPM2O94759 1503 aa13.24□□□□□ -0.29
NUDCD3-208ENST00000480209 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-208ENST00000480209 PKD2Q13563 968 aa13.24□□□□□ -0.29
NUDCD3-208ENST00000480209 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
NUDCD3-208ENST00000480209 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-208ENST00000480209 ARHGAP31Q2M1Z3 1444 aa13.23□□□□□ -0.29
NUDCD3-208ENST00000480209 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
NUDCD3-208ENST00000480209 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
NUDCD3-208ENST00000480209 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-208ENST00000480209 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
NUDCD3-208ENST00000480209 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
NUDCD3-208ENST00000480209 PTPRTO14522 1441 aa13.22□□□□□ -0.29
NUDCD3-208ENST00000480209 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
NUDCD3-208ENST00000480209 CNTLNQ9NXG0 1405 aa13.21□□□□□ -0.3
NUDCD3-208ENST00000480209 NOS1P29475 1434 aa13.2□□□□□ -0.3
NUDCD3-208ENST00000480209 KIF1BO60333 1816 aa13.19□□□□□ -0.3
NUDCD3-208ENST00000480209 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
NUDCD3-208ENST00000480209 ZMYM3Q14202 1370 aa13.18□□□□□ -0.3
NUDCD3-208ENST00000480209 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
NUDCD3-208ENST00000480209 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
NUDCD3-208ENST00000480209 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
NUDCD3-208ENST00000480209 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
NUDCD3-208ENST00000480209 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-208ENST00000480209 PTPRMP28827 1452 aa13.15□□□□□ -0.3
NUDCD3-208ENST00000480209 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
NUDCD3-208ENST00000480209 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
NUDCD3-208ENST00000480209 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
NUDCD3-208ENST00000480209 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-208ENST00000480209 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
NUDCD3-208ENST00000480209 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
NUDCD3-208ENST00000480209 CEBPAP49715 358 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-208ENST00000480209 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-208ENST00000480209 PPLO60437 1756 aa13.11□□□□□ -0.31
NUDCD3-208ENST00000480209 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
NUDCD3-208ENST00000480209 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-208ENST00000480209 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
NUDCD3-208ENST00000480209 TNRQ92752 1358 aa13.09□□□□□ -0.31
NUDCD3-208ENST00000480209 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
NUDCD3-208ENST00000480209 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-208ENST00000480209 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
NUDCD3-208ENST00000480209 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
NUDCD3-208ENST00000480209 SETD1BQ9UPS6 1966 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-208ENST00000480209 ADRA2BP18089 450 aa13.05□□□□□ -0.32
NUDCD3-208ENST00000480209 A2ML1A8K2U0 1454 aa13.04□□□□□ -0.32
NUDCD3-208ENST00000480209 IDI1Q13907 227 aa13.04□□□□□ -0.32
NUDCD3-208ENST00000480209 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
NUDCD3-208ENST00000480209 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
NUDCD3-208ENST00000480209 MYOM2P54296 1465 aa13.01□□□□□ -0.33
NUDCD3-208ENST00000480209 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
NUDCD3-208ENST00000480209 ZFYVE9O95405 1425 aa13□□□□□ -0.33
NUDCD3-208ENST00000480209 SLC52A1Q9NWF4 448 aa13□□□□□ -0.33
NUDCD3-208ENST00000480209 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-208ENST00000480209 POLR1AO95602 1720 aaPredicted RBP12.99□□□□□ -0.33
NUDCD3-208ENST00000480209 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms