RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 CEBPAP49715 358 aaPredicted RBP19.04■□□□□ 0.64
HPS1-212ENST00000480020 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
HPS1-212ENST00000480020 RNF17Q9BXT8 1623 aaKnown RBP19.03■□□□□ 0.64
HPS1-212ENST00000480020 ROCK1Q13464 1354 aa19.02■□□□□ 0.64
HPS1-212ENST00000480020 ZMYM3Q14202 1370 aa19.01■□□□□ 0.63
HPS1-212ENST00000480020 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
HPS1-212ENST00000480020 ITGAEP38570 1179 aa19■□□□□ 0.63
HPS1-212ENST00000480020 MROH2AA6NES4 1674 aa19■□□□□ 0.63
HPS1-212ENST00000480020 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
HPS1-212ENST00000480020 C3P01024 1663 aa18.99■□□□□ 0.63
HPS1-212ENST00000480020 CLTCQ00610 1675 aaKnown RBP18.99■□□□□ 0.63
HPS1-212ENST00000480020 KDM5DQ9BY66 1539 aa18.99■□□□□ 0.63
HPS1-212ENST00000480020 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
HPS1-212ENST00000480020 ANKRD50Q9ULJ7 1429 aa18.96■□□□□ 0.63
HPS1-212ENST00000480020 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
HPS1-212ENST00000480020 LMTK3Q96Q04 1460 aa18.95■□□□□ 0.62
HPS1-212ENST00000480020 ABCC3O15438 1527 aa18.95■□□□□ 0.62
HPS1-212ENST00000480020 NPATQ14207 1427 aa18.94■□□□□ 0.62
HPS1-212ENST00000480020 DEPDC5O75140 1603 aa18.94■□□□□ 0.62
HPS1-212ENST00000480020 PZPP20742 1482 aa18.9■□□□□ 0.62
HPS1-212ENST00000480020 ZC3H13Q5T200 1668 aaKnown RBP18.9■□□□□ 0.62
HPS1-212ENST00000480020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
HPS1-212ENST00000480020 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
HPS1-212ENST00000480020 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
HPS1-212ENST00000480020 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
HPS1-212ENST00000480020 KANK1Q14678 1352 aa18.87■□□□□ 0.61
HPS1-212ENST00000480020 FBXO31Q5XUX0 539 aaPredicted RBP18.87■□□□□ 0.61
HPS1-212ENST00000480020 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
HPS1-212ENST00000480020 CEP152O94986 1710 aa18.86■□□□□ 0.61
HPS1-212ENST00000480020 LMTK2Q8IWU2 1503 aa18.86■□□□□ 0.61
HPS1-212ENST00000480020 NAIPQ13075 1403 aa18.85■□□□□ 0.61
HPS1-212ENST00000480020 CAMSAP1Q5T5Y3 1602 aa18.85■□□□□ 0.61
HPS1-212ENST00000480020 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
HPS1-212ENST00000480020 HSPA2P54652 639 aa18.84■□□□□ 0.61
HPS1-212ENST00000480020 UNC13BO14795 1591 aa18.84■□□□□ 0.61
HPS1-212ENST00000480020 HFM1A2PYH4 1435 aa18.83■□□□□ 0.61
HPS1-212ENST00000480020 TNRQ92752 1358 aa18.82■□□□□ 0.6
HPS1-212ENST00000480020 ERVK-7P63135 1459 aa18.81■□□□□ 0.6
HPS1-212ENST00000480020 MYO3AQ8NEV4 1616 aa18.81■□□□□ 0.6
HPS1-212ENST00000480020 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
HPS1-212ENST00000480020 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
HPS1-212ENST00000480020 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
HPS1-212ENST00000480020 NUP155O75694 1391 aa18.77■□□□□ 0.6
HPS1-212ENST00000480020 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.59
HPS1-212ENST00000480020 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
HPS1-212ENST00000480020 ZNF142P52746 1687 aaPredicted RBP18.76■□□□□ 0.59
HPS1-212ENST00000480020 IQGAP3Q86VI3 1631 aa18.75■□□□□ 0.59
HPS1-212ENST00000480020 NLRP1Q9C000 1473 aa18.75■□□□□ 0.59
HPS1-212ENST00000480020 TET3O43151 1660 aa18.74■□□□□ 0.59
HPS1-212ENST00000480020 RPRD2Q5VT52 1461 aaKnown RBP18.72■□□□□ 0.59
HPS1-212ENST00000480020 NOS1P29475 1434 aa18.72■□□□□ 0.59
HPS1-212ENST00000480020 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
HPS1-212ENST00000480020 SYNMO15061 1565 aa18.68■□□□□ 0.58
HPS1-212ENST00000480020 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
HPS1-212ENST00000480020 E9PCH4 1651 aa18.67■□□□□ 0.58
HPS1-212ENST00000480020 STRCQ7RTU9 1775 aa18.67■□□□□ 0.58
HPS1-212ENST00000480020 UGGT1Q9NYU2 1555 aa18.67■□□□□ 0.58
HPS1-212ENST00000480020 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
HPS1-212ENST00000480020 IDI1Q13907 227 aa18.64■□□□□ 0.57
HPS1-212ENST00000480020 THEMISQ8N1K5 641 aaPredicted RBP18.64■□□□□ 0.57
HPS1-212ENST00000480020 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
HPS1-212ENST00000480020 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
HPS1-212ENST00000480020 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
HPS1-212ENST00000480020 PIK3C2BO00750 1634 aa18.61■□□□□ 0.57
HPS1-212ENST00000480020 PKD2Q13563 968 aa18.61■□□□□ 0.57
HPS1-212ENST00000480020 UBR1Q8IWV7 1749 aa18.6■□□□□ 0.57
HPS1-212ENST00000480020 PTPRTO14522 1441 aa18.6■□□□□ 0.57
HPS1-212ENST00000480020 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
HPS1-212ENST00000480020 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
HPS1-212ENST00000480020 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
HPS1-212ENST00000480020 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
HPS1-212ENST00000480020 ARHGAP23Q9P227 1491 aa18.57■□□□□ 0.56
HPS1-212ENST00000480020 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
HPS1-212ENST00000480020 SLIT1O75093 1534 aa18.56■□□□□ 0.56
HPS1-212ENST00000480020 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
HPS1-212ENST00000480020 KDM5AP29375 1690 aaKnown RBP18.56■□□□□ 0.56
HPS1-212ENST00000480020 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
HPS1-212ENST00000480020 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
HPS1-212ENST00000480020 TMEM2Q9UHN6 1383 aa18.55■□□□□ 0.56
HPS1-212ENST00000480020 SPHKAPQ2M3C7 1700 aa18.54■□□□□ 0.56
HPS1-212ENST00000480020 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
HPS1-212ENST00000480020 TRPM2O94759 1503 aa18.53■□□□□ 0.56
HPS1-212ENST00000480020 MED14O60244 1454 aa18.52■□□□□ 0.56
HPS1-212ENST00000480020 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.56
HPS1-212ENST00000480020 HRCP23327 699 aa18.52■□□□□ 0.56
HPS1-212ENST00000480020 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.55
HPS1-212ENST00000480020 LTKP29376 864 aa18.51■□□□□ 0.55
HPS1-212ENST00000480020 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
HPS1-212ENST00000480020 NPHP4O75161 1426 aaPredicted RBP18.5■□□□□ 0.55
HPS1-212ENST00000480020 FOXD1Q16676 465 aa18.5■□□□□ 0.55
HPS1-212ENST00000480020 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
HPS1-212ENST00000480020 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
HPS1-212ENST00000480020 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
HPS1-212ENST00000480020 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
HPS1-212ENST00000480020 ZFYVE9O95405 1425 aa18.48■□□□□ 0.55
HPS1-212ENST00000480020 RIMS2Q9UQ26 1411 aa18.46■□□□□ 0.55
HPS1-212ENST00000480020 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
HPS1-212ENST00000480020 MYO5BQ9ULV0 1848 aa18.45■□□□□ 0.54
HPS1-212ENST00000480020 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
HPS1-212ENST00000480020 LTBP4Q8N2S1 1624 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms