RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 HRCP23327 699 aa27.81■■■□□ 2.04
RUNX3-204ENST00000479341 RNF17Q9BXT8 1623 aaKnown RBP27.78■■■□□ 2.04
RUNX3-204ENST00000479341 GGT6Q6P531 493 aa27.77■■■□□ 2.04
RUNX3-204ENST00000479341 DEPDC5O75140 1603 aa27.75■■■□□ 2.03
RUNX3-204ENST00000479341 MROH1Q8NDA8 1641 aa27.75■■■□□ 2.03
RUNX3-204ENST00000479341 UNC13BO14795 1591 aa27.74■■■□□ 2.03
RUNX3-204ENST00000479341 MLECQ14165 292 aa27.74■■■□□ 2.03
RUNX3-204ENST00000479341 ACIN1Q9UKV3 1341 aaKnown RBP27.73■■■□□ 2.03
RUNX3-204ENST00000479341 PPP6R1Q9UPN7 881 aa27.73■■■□□ 2.03
RUNX3-204ENST00000479341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.72■■■□□ 2.03
RUNX3-204ENST00000479341 PRDM15P57071 1507 aaPredicted RBP27.71■■■□□ 2.03
RUNX3-204ENST00000479341 NUP155O75694 1391 aa27.69■■■□□ 2.02
RUNX3-204ENST00000479341 VWDEQ8N2E2 1590 aa27.69■■■□□ 2.02
RUNX3-204ENST00000479341 TRIM52Q96A61 297 aa27.68■■■□□ 2.02
RUNX3-204ENST00000479341 KANK1Q14678 1352 aa27.67■■■□□ 2.02
RUNX3-204ENST00000479341 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
RUNX3-204ENST00000479341 FAM135AQ9P2D6 1515 aa27.64■■■□□ 2.02
RUNX3-204ENST00000479341 WASHC2CQ9Y4E1 1318 aa27.64■■■□□ 2.01
RUNX3-204ENST00000479341 ABCC3O15438 1527 aa27.62■■■□□ 2.01
RUNX3-204ENST00000479341 IQGAP3Q86VI3 1631 aa27.62■■■□□ 2.01
RUNX3-204ENST00000479341 ADAMTSL3P82987 1691 aa27.62■■■□□ 2.01
RUNX3-204ENST00000479341 PZPP20742 1482 aa27.61■■■□□ 2.01
RUNX3-204ENST00000479341 LMTK2Q8IWU2 1503 aa27.61■■■□□ 2.01
RUNX3-204ENST00000479341 CNTLNQ9NXG0 1405 aa27.58■■■□□ 2
RUNX3-204ENST00000479341 ZC3H13Q5T200 1668 aaKnown RBP27.57■■■□□ 2
RUNX3-204ENST00000479341 MPHOSPH9Q99550 1183 aa27.57■■■□□ 2
RUNX3-204ENST00000479341 ESF1Q9H501 851 aaKnown RBP27.57■■■□□ 2
RUNX3-204ENST00000479341 CEP152O94986 1710 aa27.55■■■□□ 2
RUNX3-204ENST00000479341 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
RUNX3-204ENST00000479341 SLC4A1APQ9BWU0 796 aaKnown RBP27.55■■■□□ 2
RUNX3-204ENST00000479341 CLTCQ00610 1675 aaKnown RBP27.55■■■□□ 2
RUNX3-204ENST00000479341 FER1L4A9Z1Z3 1794 aa27.54■■■□□ 2
RUNX3-204ENST00000479341 MADDQ8WXG6 1647 aa27.54■■■□□ 2
RUNX3-204ENST00000479341 TET3O43151 1660 aa27.52■■■□□ 2
RUNX3-204ENST00000479341 ZMYM3Q14202 1370 aa27.51■■□□□ 1.99
RUNX3-204ENST00000479341 ARHGAP31Q2M1Z3 1444 aa27.5■■□□□ 1.99
RUNX3-204ENST00000479341 CAMSAP1Q5T5Y3 1602 aa27.5■■□□□ 1.99
RUNX3-204ENST00000479341 MROH2AA6NES4 1674 aa27.49■■□□□ 1.99
RUNX3-204ENST00000479341 PKD2Q13563 968 aa27.49■■□□□ 1.99
RUNX3-204ENST00000479341 EFCAB6Q5THR3 1501 aa27.49■■□□□ 1.99
RUNX3-204ENST00000479341 RIMS1Q86UR5 1692 aaKnown RBP27.47■■□□□ 1.99
RUNX3-204ENST00000479341 NPATQ14207 1427 aa27.47■■□□□ 1.99
RUNX3-204ENST00000479341 DHX57Q6P158 1386 aaKnown RBP27.46■■□□□ 1.99
RUNX3-204ENST00000479341 E9PCH4 1651 aa27.44■■□□□ 1.98
RUNX3-204ENST00000479341 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
RUNX3-204ENST00000479341 CEBPAP49715 358 aaPredicted RBP27.42■■□□□ 1.98
RUNX3-204ENST00000479341 FOXD1Q16676 465 aa27.41■■□□□ 1.98
RUNX3-204ENST00000479341 PTPRMP28827 1452 aa27.4■■□□□ 1.98
RUNX3-204ENST00000479341 FBXO31Q5XUX0 539 aaPredicted RBP27.4■■□□□ 1.98
RUNX3-204ENST00000479341 C3P01024 1663 aa27.4■■□□□ 1.98
RUNX3-204ENST00000479341 PTPRTO14522 1441 aa27.36■■□□□ 1.97
RUNX3-204ENST00000479341 NOS1P29475 1434 aa27.36■■□□□ 1.97
RUNX3-204ENST00000479341 ERVK-7P63135 1459 aa27.36■■□□□ 1.97
RUNX3-204ENST00000479341 PLA2R1Q13018 1463 aa27.34■■□□□ 1.97
RUNX3-204ENST00000479341 SPATA31D1Q6ZQQ2 1576 aa27.34■■□□□ 1.97
RUNX3-204ENST00000479341 CFAP65Q6ZU64 1925 aaKnown RBP27.33■■□□□ 1.97
RUNX3-204ENST00000479341 PREX1Q8TCU6 1659 aa27.33■■□□□ 1.97
RUNX3-204ENST00000479341 ANKRD30BQ9BXX2 1392 aa27.33■■□□□ 1.97
RUNX3-204ENST00000479341 PLPPR3Q6T4P5 718 aa27.32■■□□□ 1.96
RUNX3-204ENST00000479341 SPHKAPQ2M3C7 1700 aa27.28■■□□□ 1.96
RUNX3-204ENST00000479341 TNRQ92752 1358 aa27.28■■□□□ 1.96
RUNX3-204ENST00000479341 SYNMO15061 1565 aa27.27■■□□□ 1.96
RUNX3-204ENST00000479341 TRPM2O94759 1503 aa27.26■■□□□ 1.96
RUNX3-204ENST00000479341 CCER1Q8TC90 406 aaPredicted RBP27.23■■□□□ 1.95
RUNX3-204ENST00000479341 SLC52A1Q9NWF4 448 aa27.23■■□□□ 1.95
RUNX3-204ENST00000479341 SETD1BQ9UPS6 1966 aaKnown RBP27.21■■□□□ 1.95
RUNX3-204ENST00000479341 IDI1Q13907 227 aa27.21■■□□□ 1.95
RUNX3-204ENST00000479341 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
RUNX3-204ENST00000479341 UGGT1Q9NYU2 1555 aa27.19■■□□□ 1.94
RUNX3-204ENST00000479341 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
RUNX3-204ENST00000479341 CCDC144AA2RUR9 1427 aa27.18■■□□□ 1.94
RUNX3-204ENST00000479341 CLTCL1P53675 1640 aa27.18■■□□□ 1.94
RUNX3-204ENST00000479341 NLRP1Q9C000 1473 aa27.17■■□□□ 1.94
RUNX3-204ENST00000479341 SIN3AQ96ST3 1273 aa27.14■■□□□ 1.94
RUNX3-204ENST00000479341 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
RUNX3-204ENST00000479341 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
RUNX3-204ENST00000479341 A2ML1A8K2U0 1454 aa27.1■■□□□ 1.93
RUNX3-204ENST00000479341 UHRF1BP1Q6BDS2 1440 aa27.08■■□□□ 1.93
RUNX3-204ENST00000479341 FBXO41Q8TF61 875 aa27.08■■□□□ 1.93
RUNX3-204ENST00000479341 SPATA31E1Q6ZUB1 1445 aa27.07■■□□□ 1.92
RUNX3-204ENST00000479341 CEP170BQ9Y4F5 1589 aaPredicted RBP27.06■■□□□ 1.92
RUNX3-204ENST00000479341 TMEM131LA2VDJ0 1609 aa27.06■■□□□ 1.92
RUNX3-204ENST00000479341 CHGAP10645 457 aaKnown RBP27.06■■□□□ 1.92
RUNX3-204ENST00000479341 HSPA2P54652 639 aa27.06■■□□□ 1.92
RUNX3-204ENST00000479341 NEUROD1Q13562 356 aa27.06■■□□□ 1.92
RUNX3-204ENST00000479341 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
RUNX3-204ENST00000479341 KIF1BO60333 1816 aa27.04■■□□□ 1.92
RUNX3-204ENST00000479341 STAG3Q9UJ98 1225 aa27.04■■□□□ 1.92
RUNX3-204ENST00000479341 NEURL4Q96JN8 1562 aa27.04■■□□□ 1.92
RUNX3-204ENST00000479341 ZNF142P52746 1687 aaPredicted RBP27.04■■□□□ 1.92
RUNX3-204ENST00000479341 KDM5AP29375 1690 aaKnown RBP27.03■■□□□ 1.92
RUNX3-204ENST00000479341 UBR1Q8IWV7 1749 aa27.02■■□□□ 1.92
RUNX3-204ENST00000479341 THEMISQ8N1K5 641 aaPredicted RBP27■■□□□ 1.91
RUNX3-204ENST00000479341 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
RUNX3-204ENST00000479341 MYO5BQ9ULV0 1848 aa26.97■■□□□ 1.91
RUNX3-204ENST00000479341 RPGRIP1LQ68CZ1 1315 aa26.95■■□□□ 1.91
RUNX3-204ENST00000479341 ZNF326Q5BKZ1 582 aaKnown RBP26.95■■□□□ 1.9
RUNX3-204ENST00000479341 TMEM2Q9UHN6 1383 aa26.95■■□□□ 1.9
RUNX3-204ENST00000479341 ARHGAP23Q9P227 1491 aa26.93■■□□□ 1.9
RUNX3-204ENST00000479341 SLIT1O75093 1534 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms