RNA–Protein interactions for RNA: ENST00000479153.1

SUMO3-206, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 1,736 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-206ENST00000479153 RAB3GAP2Q9H2M9 1393 aa19.61■□□□□ 0.73
SUMO3-206ENST00000479153 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
SUMO3-206ENST00000479153 DEPDC5O75140 1603 aa19.58■□□□□ 0.73
SUMO3-206ENST00000479153 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.73
SUMO3-206ENST00000479153 UNC13BO14795 1591 aa19.57■□□□□ 0.72
SUMO3-206ENST00000479153 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
SUMO3-206ENST00000479153 CEP152O94986 1710 aa19.55■□□□□ 0.72
SUMO3-206ENST00000479153 FER1L4A9Z1Z3 1794 aa19.55■□□□□ 0.72
SUMO3-206ENST00000479153 PRDM15P57071 1507 aaPredicted RBP19.54■□□□□ 0.72
SUMO3-206ENST00000479153 CLTCQ00610 1675 aaKnown RBP19.53■□□□□ 0.72
SUMO3-206ENST00000479153 MADDQ8WXG6 1647 aa19.53■□□□□ 0.72
SUMO3-206ENST00000479153 NUP155O75694 1391 aa19.52■□□□□ 0.72
SUMO3-206ENST00000479153 ADAMTSL3P82987 1691 aa19.52■□□□□ 0.71
SUMO3-206ENST00000479153 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
SUMO3-206ENST00000479153 KANK1Q14678 1352 aa19.51■□□□□ 0.71
SUMO3-206ENST00000479153 RIMS1Q86UR5 1692 aaKnown RBP19.5■□□□□ 0.71
SUMO3-206ENST00000479153 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
SUMO3-206ENST00000479153 CFAP65Q6ZU64 1925 aaKnown RBP19.49■□□□□ 0.71
SUMO3-206ENST00000479153 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
SUMO3-206ENST00000479153 ABCC3O15438 1527 aa19.48■□□□□ 0.71
SUMO3-206ENST00000479153 KDM5DQ9BY66 1539 aa19.48■□□□□ 0.71
SUMO3-206ENST00000479153 VWDEQ8N2E2 1590 aa19.48■□□□□ 0.71
SUMO3-206ENST00000479153 ZC3H13Q5T200 1668 aaKnown RBP19.47■□□□□ 0.71
SUMO3-206ENST00000479153 FAM135AQ9P2D6 1515 aa19.47■□□□□ 0.71
SUMO3-206ENST00000479153 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
SUMO3-206ENST00000479153 CAMSAP1Q5T5Y3 1602 aa19.46■□□□□ 0.71
SUMO3-206ENST00000479153 HRCP23327 699 aa19.45■□□□□ 0.7
SUMO3-206ENST00000479153 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
SUMO3-206ENST00000479153 PZPP20742 1482 aa19.45■□□□□ 0.7
SUMO3-206ENST00000479153 KDM4FA0A1W2PPD8 638 aa19.44■□□□□ 0.7
SUMO3-206ENST00000479153 TET3O43151 1660 aa19.43■□□□□ 0.7
SUMO3-206ENST00000479153 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
SUMO3-206ENST00000479153 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
SUMO3-206ENST00000479153 LMTK2Q8IWU2 1503 aa19.42■□□□□ 0.7
SUMO3-206ENST00000479153 C3P01024 1663 aa19.42■□□□□ 0.7
SUMO3-206ENST00000479153 E9PCH4 1651 aa19.41■□□□□ 0.7
SUMO3-206ENST00000479153 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
SUMO3-206ENST00000479153 CEBPAP49715 358 aaPredicted RBP19.41■□□□□ 0.7
SUMO3-206ENST00000479153 MPHOSPH9Q99550 1183 aa19.41■□□□□ 0.7
SUMO3-206ENST00000479153 ZMYM3Q14202 1370 aa19.4■□□□□ 0.7
SUMO3-206ENST00000479153 EFCAB6Q5THR3 1501 aa19.4■□□□□ 0.7
SUMO3-206ENST00000479153 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
SUMO3-206ENST00000479153 PKD2Q13563 968 aa19.38■□□□□ 0.69
SUMO3-206ENST00000479153 FOXD1Q16676 465 aa19.38■□□□□ 0.69
SUMO3-206ENST00000479153 NPATQ14207 1427 aa19.37■□□□□ 0.69
SUMO3-206ENST00000479153 PTPRMP28827 1452 aa19.37■□□□□ 0.69
SUMO3-206ENST00000479153 FBXO31Q5XUX0 539 aaPredicted RBP19.35■□□□□ 0.69
SUMO3-206ENST00000479153 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
SUMO3-206ENST00000479153 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.69
SUMO3-206ENST00000479153 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
SUMO3-206ENST00000479153 SPHKAPQ2M3C7 1700 aa19.31■□□□□ 0.68
SUMO3-206ENST00000479153 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
SUMO3-206ENST00000479153 ERVK-7P63135 1459 aa19.3■□□□□ 0.68
SUMO3-206ENST00000479153 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.68
SUMO3-206ENST00000479153 SYNMO15061 1565 aa19.27■□□□□ 0.67
SUMO3-206ENST00000479153 SETD1BQ9UPS6 1966 aaKnown RBP19.25■□□□□ 0.67
SUMO3-206ENST00000479153 NOS1P29475 1434 aa19.25■□□□□ 0.67
SUMO3-206ENST00000479153 UGGT1Q9NYU2 1555 aa19.25■□□□□ 0.67
SUMO3-206ENST00000479153 PLA2R1Q13018 1463 aa19.24■□□□□ 0.67
SUMO3-206ENST00000479153 TNRQ92752 1358 aa19.24■□□□□ 0.67
SUMO3-206ENST00000479153 PTPRTO14522 1441 aa19.23■□□□□ 0.67
SUMO3-206ENST00000479153 TRPM2O94759 1503 aa19.22■□□□□ 0.67
SUMO3-206ENST00000479153 CLTCL1P53675 1640 aa19.21■□□□□ 0.67
SUMO3-206ENST00000479153 MYO3AQ8NEV4 1616 aa19.21■□□□□ 0.67
SUMO3-206ENST00000479153 ANKRD30BQ9BXX2 1392 aa19.2■□□□□ 0.66
SUMO3-206ENST00000479153 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
SUMO3-206ENST00000479153 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
SUMO3-206ENST00000479153 IDI1Q13907 227 aa19.18■□□□□ 0.66
SUMO3-206ENST00000479153 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
SUMO3-206ENST00000479153 KIF1BO60333 1816 aa19.17■□□□□ 0.66
SUMO3-206ENST00000479153 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
SUMO3-206ENST00000479153 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
SUMO3-206ENST00000479153 SIN3AQ96ST3 1273 aa19.16■□□□□ 0.66
SUMO3-206ENST00000479153 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
SUMO3-206ENST00000479153 NLRP1Q9C000 1473 aa19.14■□□□□ 0.65
SUMO3-206ENST00000479153 CEP170BQ9Y4F5 1589 aaPredicted RBP19.14■□□□□ 0.65
SUMO3-206ENST00000479153 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
SUMO3-206ENST00000479153 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
SUMO3-206ENST00000479153 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
SUMO3-206ENST00000479153 UBR1Q8IWV7 1749 aa19.13■□□□□ 0.65
SUMO3-206ENST00000479153 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
SUMO3-206ENST00000479153 A2ML1A8K2U0 1454 aa19.11■□□□□ 0.65
SUMO3-206ENST00000479153 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
SUMO3-206ENST00000479153 ADGRB3O60242 1522 aa19.1■□□□□ 0.65
SUMO3-206ENST00000479153 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
SUMO3-206ENST00000479153 RGL3Q3MIN7 710 aa19.08■□□□□ 0.64
SUMO3-206ENST00000479153 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
SUMO3-206ENST00000479153 ZNF326Q5BKZ1 582 aaKnown RBP19.06■□□□□ 0.64
SUMO3-206ENST00000479153 KDM5AP29375 1690 aaKnown RBP19.06■□□□□ 0.64
SUMO3-206ENST00000479153 HSPA2P54652 639 aa19.05■□□□□ 0.64
SUMO3-206ENST00000479153 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
SUMO3-206ENST00000479153 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
SUMO3-206ENST00000479153 THEMISQ8N1K5 641 aaPredicted RBP19.03■□□□□ 0.64
SUMO3-206ENST00000479153 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.63
SUMO3-206ENST00000479153 PPLO60437 1756 aa19■□□□□ 0.63
SUMO3-206ENST00000479153 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
SUMO3-206ENST00000479153 NEURL4Q96JN8 1562 aa18.99■□□□□ 0.63
SUMO3-206ENST00000479153 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
SUMO3-206ENST00000479153 IFT172Q9UG01 1749 aa18.98■□□□□ 0.63
SUMO3-206ENST00000479153 NEXMIFQ5QGS0 1516 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms