RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ITGAEP38570 1179 aa31.19■■■□□ 2.58
VARS-224ENST00000479051 FAM135AQ9P2D6 1515 aa31.17■■■□□ 2.58
VARS-224ENST00000479051 MROH2AA6NES4 1674 aa31.16■■■□□ 2.58
VARS-224ENST00000479051 RNF17Q9BXT8 1623 aaKnown RBP31.15■■■□□ 2.58
VARS-224ENST00000479051 PTPRKQ15262 1439 aa31.15■■■□□ 2.58
VARS-224ENST00000479051 CLTCQ00610 1675 aaKnown RBP31.14■■■□□ 2.58
VARS-224ENST00000479051 ROCK1Q13464 1354 aa31.14■■■□□ 2.58
VARS-224ENST00000479051 CEBPAP49715 358 aaPredicted RBP31.12■■■□□ 2.57
VARS-224ENST00000479051 C3P01024 1663 aa31.11■■■□□ 2.57
VARS-224ENST00000479051 KDM5DQ9BY66 1539 aa31.11■■■□□ 2.57
VARS-224ENST00000479051 WASHC2CQ9Y4E1 1318 aa31.11■■■□□ 2.57
VARS-224ENST00000479051 ZMYM3Q14202 1370 aa31.1■■■□□ 2.57
VARS-224ENST00000479051 ANKRD50Q9ULJ7 1429 aa31.07■■■□□ 2.57
VARS-224ENST00000479051 ZC3H13Q5T200 1668 aaKnown RBP31.03■■■□□ 2.56
VARS-224ENST00000479051 KANK1Q14678 1352 aa31.03■■■□□ 2.56
VARS-224ENST00000479051 PRDM15P57071 1507 aaPredicted RBP31.02■■■□□ 2.56
VARS-224ENST00000479051 MROH1Q8NDA8 1641 aa31.02■■■□□ 2.56
VARS-224ENST00000479051 NPATQ14207 1427 aa31■■■□□ 2.55
VARS-224ENST00000479051 DEPDC5O75140 1603 aa31■■■□□ 2.55
VARS-224ENST00000479051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31■■■□□ 2.556e-6■□□□□ 11
VARS-224ENST00000479051 ABCC3O15438 1527 aa30.99■■■□□ 2.55
VARS-224ENST00000479051 SETD1BQ9UPS6 1966 aaKnown RBP30.99■■■□□ 2.55
VARS-224ENST00000479051 PREX1Q8TCU6 1659 aa30.97■■■□□ 2.55
VARS-224ENST00000479051 UHRF1BP1Q6BDS2 1440 aa30.95■■■□□ 2.54
VARS-224ENST00000479051 PZPP20742 1482 aa30.95■■■□□ 2.54
VARS-224ENST00000479051 LMTK3Q96Q04 1460 aa30.94■■■□□ 2.54
VARS-224ENST00000479051 CEP152O94986 1710 aa30.93■■■□□ 2.54
VARS-224ENST00000479051 CAMSAP1Q5T5Y3 1602 aa30.89■■■□□ 2.54
VARS-224ENST00000479051 VWDEQ8N2E2 1590 aa30.87■■■□□ 2.53
VARS-224ENST00000479051 LMTK2Q8IWU2 1503 aa30.86■■■□□ 2.53
VARS-224ENST00000479051 UNC13BO14795 1591 aa30.85■■■□□ 2.53
VARS-224ENST00000479051 TNRQ92752 1358 aa30.84■■■□□ 2.53
VARS-224ENST00000479051 GCC2Q8IWJ2 1684 aa30.84■■■□□ 2.53
VARS-224ENST00000479051 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
VARS-224ENST00000479051 NAIPQ13075 1403 aa30.83■■■□□ 2.53
VARS-224ENST00000479051 ARHGAP31Q2M1Z3 1444 aa30.83■■■□□ 2.53
VARS-224ENST00000479051 FBXO31Q5XUX0 539 aaPredicted RBP30.83■■■□□ 2.53
VARS-224ENST00000479051 MYO3AQ8NEV4 1616 aa30.8■■■□□ 2.52
VARS-224ENST00000479051 HSPA2P54652 639 aa30.79■■■□□ 2.52
VARS-224ENST00000479051 ERVK-7P63135 1459 aa30.77■■■□□ 2.52
VARS-224ENST00000479051 NUP155O75694 1391 aa30.77■■■□□ 2.52
VARS-224ENST00000479051 SPATA31D1Q6ZQQ2 1576 aa30.76■■■□□ 2.52
VARS-224ENST00000479051 EFCAB6Q5THR3 1501 aa30.76■■■□□ 2.51
VARS-224ENST00000479051 CEP170BQ9Y4F5 1589 aaPredicted RBP30.74■■■□□ 2.51
VARS-224ENST00000479051 ZNF142P52746 1687 aaPredicted RBP30.74■■■□□ 2.51
VARS-224ENST00000479051 IQGAP3Q86VI3 1631 aa30.73■■■□□ 2.51
VARS-224ENST00000479051 NLRP1Q9C000 1473 aa30.73■■■□□ 2.51
VARS-224ENST00000479051 TET3O43151 1660 aa30.73■■■□□ 2.51
VARS-224ENST00000479051 A2ML1A8K2U0 1454 aa30.72■■■□□ 2.51
VARS-224ENST00000479051 CFAP65Q6ZU64 1925 aaKnown RBP30.71■■■□□ 2.51
VARS-224ENST00000479051 RPRD2Q5VT52 1461 aaKnown RBP30.7■■■□□ 2.51
VARS-224ENST00000479051 TRIM52Q96A61 297 aa30.64■■■□□ 2.5
VARS-224ENST00000479051 ACIN1Q9UKV3 1341 aaKnown RBP30.61■■■□□ 2.49
VARS-224ENST00000479051 NOS1P29475 1434 aa30.6■■■□□ 2.49
VARS-224ENST00000479051 UGGT1Q9NYU2 1555 aa30.6■■■□□ 2.49
VARS-224ENST00000479051 SETD5Q9C0A6 1442 aa30.59■■■□□ 2.49
VARS-224ENST00000479051 THEMISQ8N1K5 641 aaPredicted RBP30.59■■■□□ 2.49
VARS-224ENST00000479051 PLA2R1Q13018 1463 aa30.58■■■□□ 2.49
VARS-224ENST00000479051 E9PCH4 1651 aa30.58■■■□□ 2.49
VARS-224ENST00000479051 DMRT2Q9Y5R5 561 aa30.57■■■□□ 2.48
VARS-224ENST00000479051 SLC52A1Q9NWF4 448 aa30.55■■■□□ 2.48
VARS-224ENST00000479051 SYNMO15061 1565 aa30.54■■■□□ 2.48
VARS-224ENST00000479051 STAG3Q9UJ98 1225 aa30.53■■■□□ 2.48
VARS-224ENST00000479051 STRCQ7RTU9 1775 aa30.53■■■□□ 2.48
VARS-224ENST00000479051 PKD2Q13563 968 aa30.52■■■□□ 2.48
VARS-224ENST00000479051 SLC4A1APQ9BWU0 796 aaKnown RBP30.5■■■□□ 2.47
VARS-224ENST00000479051 IDI1Q13907 227 aa30.49■■■□□ 2.47
VARS-224ENST00000479051 PIK3C2BO00750 1634 aa30.48■■■□□ 2.47
VARS-224ENST00000479051 UBR1Q8IWV7 1749 aa30.48■■■□□ 2.47
VARS-224ENST00000479051 RAB3GAP2Q9H2M9 1393 aa30.46■■■□□ 2.47
VARS-224ENST00000479051 ANKLE2Q86XL3 938 aa30.46■■■□□ 2.47
VARS-224ENST00000479051 NCKAP5LQ9HCH0 1330 aa30.46■■■□□ 2.47
VARS-224ENST00000479051 PTPRTO14522 1441 aa30.45■■■□□ 2.46
VARS-224ENST00000479051 KDM5AP29375 1690 aaKnown RBP30.45■■■□□ 2.46
VARS-224ENST00000479051 SPHKAPQ2M3C7 1700 aa30.42■■■□□ 2.46
VARS-224ENST00000479051 ADGRB3O60242 1522 aa30.42■■■□□ 2.46
VARS-224ENST00000479051 POLR1AO95602 1720 aaPredicted RBP30.4■■■□□ 2.46
VARS-224ENST00000479051 HRCP23327 699 aa30.37■■■□□ 2.45
VARS-224ENST00000479051 MPHOSPH9Q99550 1183 aa30.37■■■□□ 2.45
VARS-224ENST00000479051 EID1Q9Y6B2 187 aa30.37■■■□□ 2.45
VARS-224ENST00000479051 SLIT1O75093 1534 aa30.37■■■□□ 2.45
VARS-224ENST00000479051 TMEM2Q9UHN6 1383 aa30.36■■■□□ 2.45
VARS-224ENST00000479051 ARHGAP23Q9P227 1491 aa30.36■■■□□ 2.45
VARS-224ENST00000479051 CHGAP10645 457 aaKnown RBP30.35■■■□□ 2.45
VARS-224ENST00000479051 TRPM2O94759 1503 aa30.35■■■□□ 2.45
VARS-224ENST00000479051 SCAF11Q99590 1463 aaKnown RBP30.32■■■□□ 2.44
VARS-224ENST00000479051 TXNDC2Q86VQ3 553 aa30.32■■■□□ 2.44
VARS-224ENST00000479051 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.44
VARS-224ENST00000479051 TMEM131LA2VDJ0 1609 aa30.31■■■□□ 2.44
VARS-224ENST00000479051 MED14O60244 1454 aa30.31■■■□□ 2.44
VARS-224ENST00000479051 NPHP4O75161 1426 aaPredicted RBP30.3■■■□□ 2.44
VARS-224ENST00000479051 HDGFP51858 240 aaKnown RBP30.29■■■□□ 2.44
VARS-224ENST00000479051 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
VARS-224ENST00000479051 LTKP29376 864 aa30.26■■■□□ 2.43
VARS-224ENST00000479051 MYO5BQ9ULV0 1848 aa30.25■■■□□ 2.43
VARS-224ENST00000479051 FOXD1Q16676 465 aa30.25■■■□□ 2.43
VARS-224ENST00000479051 IQGAP1P46940 1657 aa30.25■■■□□ 2.43
VARS-224ENST00000479051 CLTCL1P53675 1640 aa30.25■■■□□ 2.43
VARS-224ENST00000479051 RIMS2Q9UQ26 1411 aa30.22■■■□□ 2.43
VARS-224ENST00000479051 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms