RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
SMARCAL1-211ENST00000479008 HRCP23327 699 aa20.28■□□□□ 0.84
SMARCAL1-211ENST00000479008 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
SMARCAL1-211ENST00000479008 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.83
SMARCAL1-211ENST00000479008 PRDM15P57071 1507 aaPredicted RBP20.26■□□□□ 0.83
SMARCAL1-211ENST00000479008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
SMARCAL1-211ENST00000479008 GGT6Q6P531 493 aa20.24■□□□□ 0.83
SMARCAL1-211ENST00000479008 CEP152O94986 1710 aa20.24■□□□□ 0.83
SMARCAL1-211ENST00000479008 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
SMARCAL1-211ENST00000479008 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
SMARCAL1-211ENST00000479008 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
SMARCAL1-211ENST00000479008 NUP155O75694 1391 aa20.22■□□□□ 0.83
SMARCAL1-211ENST00000479008 MLECQ14165 292 aa20.22■□□□□ 0.83
SMARCAL1-211ENST00000479008 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
SMARCAL1-211ENST00000479008 KANK1Q14678 1352 aa20.21■□□□□ 0.83
SMARCAL1-211ENST00000479008 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
SMARCAL1-211ENST00000479008 PZPP20742 1482 aa20.19■□□□□ 0.82
SMARCAL1-211ENST00000479008 FAM135AQ9P2D6 1515 aa20.19■□□□□ 0.82
SMARCAL1-211ENST00000479008 CLTCQ00610 1675 aaKnown RBP20.17■□□□□ 0.82
SMARCAL1-211ENST00000479008 ABCC3O15438 1527 aa20.17■□□□□ 0.82
SMARCAL1-211ENST00000479008 TET3O43151 1660 aa20.16■□□□□ 0.82
SMARCAL1-211ENST00000479008 FER1L4A9Z1Z3 1794 aa20.16■□□□□ 0.82
SMARCAL1-211ENST00000479008 CAMSAP1Q5T5Y3 1602 aa20.15■□□□□ 0.82
SMARCAL1-211ENST00000479008 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
SMARCAL1-211ENST00000479008 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
SMARCAL1-211ENST00000479008 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
SMARCAL1-211ENST00000479008 SLC4A1APQ9BWU0 796 aaKnown RBP20.14■□□□□ 0.81
SMARCAL1-211ENST00000479008 DHX57Q6P158 1386 aaKnown RBP20.13■□□□□ 0.81
SMARCAL1-211ENST00000479008 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
SMARCAL1-211ENST00000479008 E9PCH4 1651 aa20.12■□□□□ 0.81
SMARCAL1-211ENST00000479008 ADAMTSL3P82987 1691 aa20.11■□□□□ 0.81
SMARCAL1-211ENST00000479008 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
SMARCAL1-211ENST00000479008 EFCAB6Q5THR3 1501 aa20.11■□□□□ 0.81
SMARCAL1-211ENST00000479008 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
SMARCAL1-211ENST00000479008 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
SMARCAL1-211ENST00000479008 MROH2AA6NES4 1674 aa20.09■□□□□ 0.81
SMARCAL1-211ENST00000479008 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.81
SMARCAL1-211ENST00000479008 PKD2Q13563 968 aa20.08■□□□□ 0.81
SMARCAL1-211ENST00000479008 CNTLNQ9NXG0 1405 aa20.07■□□□□ 0.8
SMARCAL1-211ENST00000479008 FOXD1Q16676 465 aa20.05■□□□□ 0.8
SMARCAL1-211ENST00000479008 SPHKAPQ2M3C7 1700 aa20.04■□□□□ 0.8
SMARCAL1-211ENST00000479008 NPATQ14207 1427 aa20.03■□□□□ 0.8
SMARCAL1-211ENST00000479008 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
SMARCAL1-211ENST00000479008 C3P01024 1663 aa20.03■□□□□ 0.8
SMARCAL1-211ENST00000479008 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.8
SMARCAL1-211ENST00000479008 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.8
SMARCAL1-211ENST00000479008 PREX1Q8TCU6 1659 aa20.02■□□□□ 0.8
SMARCAL1-211ENST00000479008 ZMYM3Q14202 1370 aa20■□□□□ 0.79
SMARCAL1-211ENST00000479008 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.79
SMARCAL1-211ENST00000479008 ERVK-7P63135 1459 aa19.95■□□□□ 0.78
SMARCAL1-211ENST00000479008 TRPM2O94759 1503 aa19.95■□□□□ 0.78
SMARCAL1-211ENST00000479008 PTPRTO14522 1441 aa19.94■□□□□ 0.78
SMARCAL1-211ENST00000479008 PLA2R1Q13018 1463 aa19.94■□□□□ 0.78
SMARCAL1-211ENST00000479008 FBXO31Q5XUX0 539 aaPredicted RBP19.94■□□□□ 0.78
SMARCAL1-211ENST00000479008 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
SMARCAL1-211ENST00000479008 SYNMO15061 1565 aa19.94■□□□□ 0.78
SMARCAL1-211ENST00000479008 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
SMARCAL1-211ENST00000479008 NOS1P29475 1434 aa19.93■□□□□ 0.78
SMARCAL1-211ENST00000479008 CEBPAP49715 358 aaPredicted RBP19.93■□□□□ 0.78
SMARCAL1-211ENST00000479008 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
SMARCAL1-211ENST00000479008 PTPRMP28827 1452 aa19.92■□□□□ 0.78
SMARCAL1-211ENST00000479008 CLTCL1P53675 1640 aa19.91■□□□□ 0.78
SMARCAL1-211ENST00000479008 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
SMARCAL1-211ENST00000479008 KDM4FA0A1W2PPD8 638 aa19.9■□□□□ 0.78
SMARCAL1-211ENST00000479008 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
SMARCAL1-211ENST00000479008 PIK3C2BO00750 1634 aa19.89■□□□□ 0.77
SMARCAL1-211ENST00000479008 KIF1BO60333 1816 aa19.89■□□□□ 0.77
SMARCAL1-211ENST00000479008 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
SMARCAL1-211ENST00000479008 TNRQ92752 1358 aa19.87■□□□□ 0.77
SMARCAL1-211ENST00000479008 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
SMARCAL1-211ENST00000479008 SETD1BQ9UPS6 1966 aaKnown RBP19.84■□□□□ 0.77
SMARCAL1-211ENST00000479008 MYO3AQ8NEV4 1616 aa19.84■□□□□ 0.77
SMARCAL1-211ENST00000479008 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.77
SMARCAL1-211ENST00000479008 SLC52A1Q9NWF4 448 aa19.82■□□□□ 0.76
SMARCAL1-211ENST00000479008 IDI1Q13907 227 aa19.8■□□□□ 0.76
SMARCAL1-211ENST00000479008 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
SMARCAL1-211ENST00000479008 ADGRB3O60242 1522 aa19.78■□□□□ 0.76
SMARCAL1-211ENST00000479008 TMEM131LA2VDJ0 1609 aa19.78■□□□□ 0.76
SMARCAL1-211ENST00000479008 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
SMARCAL1-211ENST00000479008 UBR1Q8IWV7 1749 aa19.77■□□□□ 0.76
SMARCAL1-211ENST00000479008 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
SMARCAL1-211ENST00000479008 ZNF142P52746 1687 aaPredicted RBP19.76■□□□□ 0.75
SMARCAL1-211ENST00000479008 NEURL4Q96JN8 1562 aa19.76■□□□□ 0.75
SMARCAL1-211ENST00000479008 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
SMARCAL1-211ENST00000479008 CEP170BQ9Y4F5 1589 aaPredicted RBP19.75■□□□□ 0.75
SMARCAL1-211ENST00000479008 TONSLQ96HA7 1378 aa19.74■□□□□ 0.75
SMARCAL1-211ENST00000479008 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
SMARCAL1-211ENST00000479008 A2ML1A8K2U0 1454 aa19.73■□□□□ 0.75
SMARCAL1-211ENST00000479008 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
SMARCAL1-211ENST00000479008 IFT172Q9UG01 1749 aa19.72■□□□□ 0.75
SMARCAL1-211ENST00000479008 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
SMARCAL1-211ENST00000479008 PPLO60437 1756 aa19.7■□□□□ 0.74
SMARCAL1-211ENST00000479008 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
SMARCAL1-211ENST00000479008 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
SMARCAL1-211ENST00000479008 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
SMARCAL1-211ENST00000479008 TIMELESSQ9UNS1 1208 aa19.66■□□□□ 0.74
SMARCAL1-211ENST00000479008 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
SMARCAL1-211ENST00000479008 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
SMARCAL1-211ENST00000479008 ZEB1P37275 1124 aaPredicted RBP19.63■□□□□ 0.73
SMARCAL1-211ENST00000479008 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms