RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
NUDCD3-207ENST00000478769 ADAMTSL3P82987 1691 aa20.36■□□□□ 0.85
NUDCD3-207ENST00000478769 MLECQ14165 292 aa20.36■□□□□ 0.85
NUDCD3-207ENST00000478769 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
NUDCD3-207ENST00000478769 GGT6Q6P531 493 aa20.33■□□□□ 0.85
NUDCD3-207ENST00000478769 FER1L4A9Z1Z3 1794 aa20.33■□□□□ 0.84
NUDCD3-207ENST00000478769 VWDEQ8N2E2 1590 aa20.33■□□□□ 0.84
NUDCD3-207ENST00000478769 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.84
NUDCD3-207ENST00000478769 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
NUDCD3-207ENST00000478769 ABCC3O15438 1527 aa20.31■□□□□ 0.84
NUDCD3-207ENST00000478769 FAM135AQ9P2D6 1515 aa20.31■□□□□ 0.84
NUDCD3-207ENST00000478769 CEP152O94986 1710 aa20.3■□□□□ 0.84
NUDCD3-207ENST00000478769 ZC3H13Q5T200 1668 aaKnown RBP20.29■□□□□ 0.84
NUDCD3-207ENST00000478769 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
NUDCD3-207ENST00000478769 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
NUDCD3-207ENST00000478769 RIMS1Q86UR5 1692 aaKnown RBP20.28■□□□□ 0.84
NUDCD3-207ENST00000478769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.844e-9■□□□□ 9.3
NUDCD3-207ENST00000478769 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.84
NUDCD3-207ENST00000478769 LMTK2Q8IWU2 1503 aa20.26■□□□□ 0.83
NUDCD3-207ENST00000478769 KANK1Q14678 1352 aa20.25■□□□□ 0.83
NUDCD3-207ENST00000478769 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
NUDCD3-207ENST00000478769 MROH2AA6NES4 1674 aa20.25■□□□□ 0.83
NUDCD3-207ENST00000478769 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
NUDCD3-207ENST00000478769 NUP155O75694 1391 aa20.24■□□□□ 0.83
NUDCD3-207ENST00000478769 KDM4FA0A1W2PPD8 638 aa20.24■□□□□ 0.83
NUDCD3-207ENST00000478769 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
NUDCD3-207ENST00000478769 PZPP20742 1482 aa20.23■□□□□ 0.83
NUDCD3-207ENST00000478769 WASHC2CQ9Y4E1 1318 aa20.23■□□□□ 0.83
NUDCD3-207ENST00000478769 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
NUDCD3-207ENST00000478769 TET3O43151 1660 aa20.22■□□□□ 0.83
NUDCD3-207ENST00000478769 C3P01024 1663 aa20.19■□□□□ 0.82
NUDCD3-207ENST00000478769 PTPRMP28827 1452 aa20.19■□□□□ 0.82
NUDCD3-207ENST00000478769 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
NUDCD3-207ENST00000478769 ESF1Q9H501 851 aaKnown RBP20.19■□□□□ 0.82
NUDCD3-207ENST00000478769 HRCP23327 699 aa20.18■□□□□ 0.82
NUDCD3-207ENST00000478769 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
NUDCD3-207ENST00000478769 NPATQ14207 1427 aa20.16■□□□□ 0.82
NUDCD3-207ENST00000478769 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
NUDCD3-207ENST00000478769 E9PCH4 1651 aa20.16■□□□□ 0.82
NUDCD3-207ENST00000478769 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
NUDCD3-207ENST00000478769 CEBPAP49715 358 aaPredicted RBP20.12■□□□□ 0.81
NUDCD3-207ENST00000478769 RPRD2Q5VT52 1461 aaKnown RBP20.11■□□□□ 0.81
NUDCD3-207ENST00000478769 PREX1Q8TCU6 1659 aa20.11■□□□□ 0.81
NUDCD3-207ENST00000478769 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
NUDCD3-207ENST00000478769 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
NUDCD3-207ENST00000478769 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
NUDCD3-207ENST00000478769 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
NUDCD3-207ENST00000478769 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
NUDCD3-207ENST00000478769 PKD2Q13563 968 aa20.07■□□□□ 0.8
NUDCD3-207ENST00000478769 FBXO31Q5XUX0 539 aaPredicted RBP20.07■□□□□ 0.8
NUDCD3-207ENST00000478769 SYNMO15061 1565 aa20.07■□□□□ 0.8
NUDCD3-207ENST00000478769 NOS1P29475 1434 aa20.06■□□□□ 0.8
NUDCD3-207ENST00000478769 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
NUDCD3-207ENST00000478769 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
NUDCD3-207ENST00000478769 FOXD1Q16676 465 aa20.04■□□□□ 0.8
NUDCD3-207ENST00000478769 PTPRTO14522 1441 aa20.03■□□□□ 0.8
NUDCD3-207ENST00000478769 DHX57Q6P158 1386 aaKnown RBP20.03■□□□□ 0.8
NUDCD3-207ENST00000478769 TNRQ92752 1358 aa20.03■□□□□ 0.8
NUDCD3-207ENST00000478769 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
NUDCD3-207ENST00000478769 TRPM2O94759 1503 aa20.02■□□□□ 0.8
NUDCD3-207ENST00000478769 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.8
NUDCD3-207ENST00000478769 UGGT1Q9NYU2 1555 aa20.01■□□□□ 0.79
NUDCD3-207ENST00000478769 PIK3C2BO00750 1634 aa19.99■□□□□ 0.79
NUDCD3-207ENST00000478769 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
NUDCD3-207ENST00000478769 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
NUDCD3-207ENST00000478769 NLRP1Q9C000 1473 aa19.96■□□□□ 0.79
NUDCD3-207ENST00000478769 CEP170BQ9Y4F5 1589 aaPredicted RBP19.95■□□□□ 0.78
NUDCD3-207ENST00000478769 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
NUDCD3-207ENST00000478769 UHRF1BP1Q6BDS2 1440 aa19.93■□□□□ 0.78
NUDCD3-207ENST00000478769 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
NUDCD3-207ENST00000478769 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
NUDCD3-207ENST00000478769 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
NUDCD3-207ENST00000478769 LMTK3Q96Q04 1460 aa19.91■□□□□ 0.78
NUDCD3-207ENST00000478769 CCDC144AA2RUR9 1427 aa19.9■□□□□ 0.78
NUDCD3-207ENST00000478769 IDI1Q13907 227 aa19.89■□□□□ 0.77
NUDCD3-207ENST00000478769 UBR1Q8IWV7 1749 aa19.89■□□□□ 0.77
NUDCD3-207ENST00000478769 SLC52A1Q9NWF4 448 aa19.89■□□□□ 0.77
NUDCD3-207ENST00000478769 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
NUDCD3-207ENST00000478769 KDM5AP29375 1690 aaKnown RBP19.87■□□□□ 0.77
NUDCD3-207ENST00000478769 MYO5BQ9ULV0 1848 aa19.85■□□□□ 0.77
NUDCD3-207ENST00000478769 KIF1BO60333 1816 aa19.84■□□□□ 0.77
NUDCD3-207ENST00000478769 AEBP2Q6ZN18 517 aaPredicted RBP19.82■□□□□ 0.76
NUDCD3-207ENST00000478769 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
NUDCD3-207ENST00000478769 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
NUDCD3-207ENST00000478769 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
NUDCD3-207ENST00000478769 ARHGAP23Q9P227 1491 aa19.79■□□□□ 0.76
NUDCD3-207ENST00000478769 SLIT1O75093 1534 aa19.78■□□□□ 0.76
NUDCD3-207ENST00000478769 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
NUDCD3-207ENST00000478769 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
NUDCD3-207ENST00000478769 HSPA2P54652 639 aa19.77■□□□□ 0.76
NUDCD3-207ENST00000478769 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
NUDCD3-207ENST00000478769 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
NUDCD3-207ENST00000478769 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
NUDCD3-207ENST00000478769 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
NUDCD3-207ENST00000478769 THEMISQ8N1K5 641 aaPredicted RBP19.75■□□□□ 0.75
NUDCD3-207ENST00000478769 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
NUDCD3-207ENST00000478769 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
NUDCD3-207ENST00000478769 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
NUDCD3-207ENST00000478769 POLR1AO95602 1720 aaPredicted RBP19.72■□□□□ 0.75
NUDCD3-207ENST00000478769 PPLO60437 1756 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms