RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
RC3H2-208ENST00000478216 RTEL1-TNFRSF6BF6WH68 1400 aa22.87■■□□□ 1.25
RC3H2-208ENST00000478216 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
RC3H2-208ENST00000478216 MBD5Q9P267 1494 aa22.86■■□□□ 1.25
RC3H2-208ENST00000478216 CPS1P31327 1500 aa22.86■■□□□ 1.25
RC3H2-208ENST00000478216 TOM1O60784 492 aa22.85■■□□□ 1.25
RC3H2-208ENST00000478216 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
RC3H2-208ENST00000478216 CCDC141Q6ZP82 1450 aa22.84■■□□□ 1.25
RC3H2-208ENST00000478216 WASHC2CQ9Y4E1 1318 aa22.83■■□□□ 1.25
RC3H2-208ENST00000478216 HSPA1LP34931 641 aa22.83■■□□□ 1.25
RC3H2-208ENST00000478216 PZPP20742 1482 aa22.83■■□□□ 1.25
RC3H2-208ENST00000478216 NEURL4Q96JN8 1562 aa22.83■■□□□ 1.25
RC3H2-208ENST00000478216 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
RC3H2-208ENST00000478216 SHANK2Q9UPX8 1470 aa22.82■■□□□ 1.24
RC3H2-208ENST00000478216 MED1Q15648 1581 aaPredicted RBP22.81■■□□□ 1.24
RC3H2-208ENST00000478216 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
RC3H2-208ENST00000478216 FAM135AQ9P2D6 1515 aa22.81■■□□□ 1.24
RC3H2-208ENST00000478216 CAMSAP2Q08AD1 1489 aa22.8■■□□□ 1.24
RC3H2-208ENST00000478216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.8■■□□□ 1.24
RC3H2-208ENST00000478216 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
RC3H2-208ENST00000478216 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
RC3H2-208ENST00000478216 UGGT1Q9NYU2 1555 aa22.76■■□□□ 1.23
RC3H2-208ENST00000478216 NCOA2Q15596 1464 aa22.76■■□□□ 1.23
RC3H2-208ENST00000478216 NLRP1Q9C000 1473 aa22.76■■□□□ 1.23
RC3H2-208ENST00000478216 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
RC3H2-208ENST00000478216 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
RC3H2-208ENST00000478216 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
RC3H2-208ENST00000478216 RSPH4AQ5TD94 716 aa22.73■■□□□ 1.23
RC3H2-208ENST00000478216 VWDEQ8N2E2 1590 aa22.72■■□□□ 1.23
RC3H2-208ENST00000478216 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
RC3H2-208ENST00000478216 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
RC3H2-208ENST00000478216 DEPDC5O75140 1603 aa22.7■■□□□ 1.22
RC3H2-208ENST00000478216 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
RC3H2-208ENST00000478216 ARHGEF5Q12774 1597 aa22.68■■□□□ 1.22
RC3H2-208ENST00000478216 MED14O60244 1454 aa22.66■■□□□ 1.22
RC3H2-208ENST00000478216 ZC3H13Q5T200 1668 aaKnown RBP22.65■■□□□ 1.22
RC3H2-208ENST00000478216 ABCC3O15438 1527 aa22.63■■□□□ 1.21
RC3H2-208ENST00000478216 RNF17Q9BXT8 1623 aaKnown RBP22.63■■□□□ 1.21
RC3H2-208ENST00000478216 SYNMO15061 1565 aa22.62■■□□□ 1.21
RC3H2-208ENST00000478216 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
RC3H2-208ENST00000478216 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
RC3H2-208ENST00000478216 EIF2AK4Q9P2K8 1649 aaKnown RBP22.59■■□□□ 1.21
RC3H2-208ENST00000478216 ALKQ9UM73 1620 aa22.59■■□□□ 1.21
RC3H2-208ENST00000478216 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
RC3H2-208ENST00000478216 STRCP1A6NGW2 1772 aa22.57■■□□□ 1.2
RC3H2-208ENST00000478216 CEP152O94986 1710 aa22.57■■□□□ 1.2
RC3H2-208ENST00000478216 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
RC3H2-208ENST00000478216 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
RC3H2-208ENST00000478216 UBR1Q8IWV7 1749 aa22.53■■□□□ 1.2
RC3H2-208ENST00000478216 MROH1Q8NDA8 1641 aa22.51■■□□□ 1.19
RC3H2-208ENST00000478216 CFAP65Q6ZU64 1925 aaKnown RBP22.49■■□□□ 1.19
RC3H2-208ENST00000478216 DUOX2Q9NRD8 1548 aa22.49■■□□□ 1.19
RC3H2-208ENST00000478216 TXNDC2Q86VQ3 553 aa22.49■■□□□ 1.19
RC3H2-208ENST00000478216 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
RC3H2-208ENST00000478216 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
RC3H2-208ENST00000478216 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
RC3H2-208ENST00000478216 MYOM3Q5VTT5 1437 aa22.46■■□□□ 1.19
RC3H2-208ENST00000478216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.18
RC3H2-208ENST00000478216 SLIT1O75093 1534 aa22.44■■□□□ 1.18
RC3H2-208ENST00000478216 KIF15Q9NS87 1388 aa22.44■■□□□ 1.18
RC3H2-208ENST00000478216 LTKP29376 864 aa22.43■■□□□ 1.18
RC3H2-208ENST00000478216 PRDM15P57071 1507 aaPredicted RBP22.42■■□□□ 1.18
RC3H2-208ENST00000478216 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
RC3H2-208ENST00000478216 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
RC3H2-208ENST00000478216 KANK1Q14678 1352 aa22.4■■□□□ 1.18
RC3H2-208ENST00000478216 PIK3C2BO00750 1634 aa22.4■■□□□ 1.18
RC3H2-208ENST00000478216 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
RC3H2-208ENST00000478216 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
RC3H2-208ENST00000478216 ARHGAP31Q2M1Z3 1444 aa22.39■■□□□ 1.17
RC3H2-208ENST00000478216 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
RC3H2-208ENST00000478216 XIRP1Q702N8 1843 aaKnown RBP22.37■■□□□ 1.17
RC3H2-208ENST00000478216 TMEM2Q9UHN6 1383 aa22.37■■□□□ 1.17
RC3H2-208ENST00000478216 MAP3K1Q13233 1512 aa22.35■■□□□ 1.17
RC3H2-208ENST00000478216 EFCAB6Q5THR3 1501 aa22.35■■□□□ 1.17
RC3H2-208ENST00000478216 BCANQ96GW7 911 aa22.34■■□□□ 1.17
RC3H2-208ENST00000478216 TMEM94Q12767 1356 aa22.34■■□□□ 1.17
RC3H2-208ENST00000478216 PTPN23Q9H3S7 1636 aa22.33■■□□□ 1.17
RC3H2-208ENST00000478216 ABCC5O15440 1437 aa22.32■■□□□ 1.16
RC3H2-208ENST00000478216 APLP2Q06481 763 aa22.32■■□□□ 1.16
RC3H2-208ENST00000478216 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
RC3H2-208ENST00000478216 FAM135BQ49AJ0 1406 aa22.31■■□□□ 1.16
RC3H2-208ENST00000478216 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
RC3H2-208ENST00000478216 SLC26A8Q96RN1 970 aa22.3■■□□□ 1.16
RC3H2-208ENST00000478216 DAPK1P53355 1430 aa22.3■■□□□ 1.16
RC3H2-208ENST00000478216 ROBO1Q9Y6N7 1651 aa22.3■■□□□ 1.16
RC3H2-208ENST00000478216 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
RC3H2-208ENST00000478216 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
RC3H2-208ENST00000478216 KCNA6P17658 529 aa22.28■■□□□ 1.16
RC3H2-208ENST00000478216 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
RC3H2-208ENST00000478216 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
RC3H2-208ENST00000478216 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
RC3H2-208ENST00000478216 IDI1Q13907 227 aa22.26■■□□□ 1.15
RC3H2-208ENST00000478216 ADGRB3O60242 1522 aa22.25■■□□□ 1.15
RC3H2-208ENST00000478216 MSH6P52701 1360 aa22.25■■□□□ 1.15
RC3H2-208ENST00000478216 NKTRP30414 1462 aaKnown RBP22.23■■□□□ 1.15
RC3H2-208ENST00000478216 LMTK2Q8IWU2 1503 aa22.23■■□□□ 1.15
RC3H2-208ENST00000478216 POTEAQ6S8J7 498 aa22.23■■□□□ 1.15
RC3H2-208ENST00000478216 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
RC3H2-208ENST00000478216 PPP1R15AO75807 674 aaPredicted RBP22.21■■□□□ 1.15
RC3H2-208ENST00000478216 TET3O43151 1660 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms