RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 A2MP01023 1474 aa15.81■□□□□ 0.12
RPSA-206ENST00000477325 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
RPSA-206ENST00000477325 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
RPSA-206ENST00000477325 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
RPSA-206ENST00000477325 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
RPSA-206ENST00000477325 MED14O60244 1454 aa15.78■□□□□ 0.12
RPSA-206ENST00000477325 GGT6Q6P531 493 aa15.76■□□□□ 0.11
RPSA-206ENST00000477325 DEPDC5O75140 1603 aa15.76■□□□□ 0.11
RPSA-206ENST00000477325 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
RPSA-206ENST00000477325 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
RPSA-206ENST00000477325 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
RPSA-206ENST00000477325 HNRNPMP52272 730 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPSA-206ENST00000477325 KIAA1107Q9UPP5 1409 aa15.74■□□□□ 0.11
RPSA-206ENST00000477325 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
RPSA-206ENST00000477325 TNRQ92752 1358 aa15.73■□□□□ 0.11
RPSA-206ENST00000477325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.73■□□□□ 0.11
RPSA-206ENST00000477325 NPHP4O75161 1426 aaPredicted RBP15.72■□□□□ 0.11
RPSA-206ENST00000477325 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
RPSA-206ENST00000477325 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
RPSA-206ENST00000477325 SYNMO15061 1565 aa15.71■□□□□ 0.11
RPSA-206ENST00000477325 IQGAP1P46940 1657 aa15.71■□□□□ 0.11
RPSA-206ENST00000477325 POTEAQ6S8J7 498 aa15.71■□□□□ 0.11
RPSA-206ENST00000477325 PZPP20742 1482 aa15.71■□□□□ 0.1
RPSA-206ENST00000477325 ANKLE2Q86XL3 938 aa15.7■□□□□ 0.1
RPSA-206ENST00000477325 ZNF777Q9ULD5 760 aaPredicted RBP15.7■□□□□ 0.1
RPSA-206ENST00000477325 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
RPSA-206ENST00000477325 UGGT1Q9NYU2 1555 aa15.67■□□□□ 0.1
RPSA-206ENST00000477325 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
RPSA-206ENST00000477325 ZC3H13Q5T200 1668 aaKnown RBP15.67■□□□□ 0.1
RPSA-206ENST00000477325 XIRP1Q702N8 1843 aaKnown RBP15.66■□□□□ 0.1
RPSA-206ENST00000477325 NLRP1Q9C000 1473 aa15.66■□□□□ 0.1
RPSA-206ENST00000477325 SETD1AO15047 1707 aaKnown RBP15.66■□□□□ 0.1
RPSA-206ENST00000477325 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
RPSA-206ENST00000477325 THEMISQ8N1K5 641 aaPredicted RBP15.65■□□□□ 0.1
RPSA-206ENST00000477325 MIA2Q96PC5 1412 aa15.65■□□□□ 0.1
RPSA-206ENST00000477325 KDM5DQ9BY66 1539 aa15.64■□□□□ 0.09
RPSA-206ENST00000477325 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
RPSA-206ENST00000477325 DHX29Q7Z478 1369 aaKnown RBP15.63■□□□□ 0.09
RPSA-206ENST00000477325 MBD5Q9P267 1494 aa15.63■□□□□ 0.09
RPSA-206ENST00000477325 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
RPSA-206ENST00000477325 RTEL1-TNFRSF6BF6WH68 1400 aa15.61■□□□□ 0.09
RPSA-206ENST00000477325 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
RPSA-206ENST00000477325 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
RPSA-206ENST00000477325 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
RPSA-206ENST00000477325 CFDP1Q9UEE9 299 aaPredicted RBP15.59■□□□□ 0.09
RPSA-206ENST00000477325 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
RPSA-206ENST00000477325 KIF3BO15066 747 aa15.56■□□□□ 0.08
RPSA-206ENST00000477325 KCNA4P22459 653 aa15.56■□□□□ 0.08
RPSA-206ENST00000477325 CCNB3Q8WWL7 1395 aa15.55■□□□□ 0.08
RPSA-206ENST00000477325 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
RPSA-206ENST00000477325 UBR1Q8IWV7 1749 aa15.54■□□□□ 0.08
RPSA-206ENST00000477325 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
RPSA-206ENST00000477325 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
RPSA-206ENST00000477325 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.07
RPSA-206ENST00000477325 UPF1Q92900 1129 aaKnown RBP eCLIP15.51■□□□□ 0.07
RPSA-206ENST00000477325 NCOA2Q15596 1464 aa15.51■□□□□ 0.07
RPSA-206ENST00000477325 ARHGAP23Q9P227 1491 aa15.51■□□□□ 0.07
RPSA-206ENST00000477325 ERVK-7P63135 1459 aa15.5■□□□□ 0.07
RPSA-206ENST00000477325 SLIT1O75093 1534 aa15.49■□□□□ 0.07
RPSA-206ENST00000477325 LTKP29376 864 aa15.49■□□□□ 0.07
RPSA-206ENST00000477325 ABCC3O15438 1527 aa15.48■□□□□ 0.07
RPSA-206ENST00000477325 MAP3K1Q13233 1512 aa15.48■□□□□ 0.07
RPSA-206ENST00000477325 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
RPSA-206ENST00000477325 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
RPSA-206ENST00000477325 MROH1Q8NDA8 1641 aa15.44■□□□□ 0.06
RPSA-206ENST00000477325 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
RPSA-206ENST00000477325 CFAP65Q6ZU64 1925 aaKnown RBP15.42■□□□□ 0.06
RPSA-206ENST00000477325 PHLPP1O60346 1717 aa15.42■□□□□ 0.06
RPSA-206ENST00000477325 LRP6O75581 1613 aa15.42■□□□□ 0.06
RPSA-206ENST00000477325 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
RPSA-206ENST00000477325 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
RPSA-206ENST00000477325 JCADQ9P266 1359 aa15.41■□□□□ 0.06
RPSA-206ENST00000477325 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
RPSA-206ENST00000477325 COL16A1Q07092 1604 aaPredicted RBP15.4■□□□□ 0.06
RPSA-206ENST00000477325 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
RPSA-206ENST00000477325 CEP152O94986 1710 aa15.4■□□□□ 0.06
RPSA-206ENST00000477325 EHBP1L1Q8N3D4 1523 aa15.39■□□□□ 0.05
RPSA-206ENST00000477325 TET3O43151 1660 aa15.39■□□□□ 0.05
RPSA-206ENST00000477325 ARHGEF5Q12774 1597 aa15.39■□□□□ 0.05
RPSA-206ENST00000477325 PRDM15P57071 1507 aaPredicted RBP15.38■□□□□ 0.05
RPSA-206ENST00000477325 EIF2AK4Q9P2K8 1649 aaKnown RBP15.38■□□□□ 0.05
RPSA-206ENST00000477325 NWD1Q149M9 1564 aa15.37■□□□□ 0.05
RPSA-206ENST00000477325 KCNA6P17658 529 aa15.37■□□□□ 0.05
RPSA-206ENST00000477325 RBM33Q96EV2 1170 aaKnown RBP15.37■□□□□ 0.05
RPSA-206ENST00000477325 RSPH4AQ5TD94 716 aa15.36■□□□□ 0.05
RPSA-206ENST00000477325 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
RPSA-206ENST00000477325 PIK3C2BO00750 1634 aa15.35■□□□□ 0.05
RPSA-206ENST00000477325 EP400Q96L91 3159 aa15.35■□□□□ 0.05
RPSA-206ENST00000477325 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
RPSA-206ENST00000477325 NKTRP30414 1462 aaKnown RBP15.34■□□□□ 0.05
RPSA-206ENST00000477325 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
RPSA-206ENST00000477325 ARHGAP31Q2M1Z3 1444 aa15.34■□□□□ 0.05
RPSA-206ENST00000477325 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.05
RPSA-206ENST00000477325 KDM5AP29375 1690 aaKnown RBP15.33■□□□□ 0.04
RPSA-206ENST00000477325 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
RPSA-206ENST00000477325 FGD6Q6ZV73 1430 aa15.33■□□□□ 0.04
RPSA-206ENST00000477325 ZNF772Q68DY9 489 aaPredicted RBP15.32■□□□□ 0.04
RPSA-206ENST00000477325 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
RPSA-206ENST00000477325 EID1Q9Y6B2 187 aa15.32■□□□□ 0.04
RPSA-206ENST00000477325 SPATA31A6Q5VVP1 1343 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms