RNA–Protein interactions for RNA: ENST00000477188.1

MMACHC-202, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 3

Gene MMACHC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-202ENST00000477188 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
MMACHC-202ENST00000477188 TNRQ92752 1358 aa19.21■□□□□ 0.67
MMACHC-202ENST00000477188 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
MMACHC-202ENST00000477188 ALKQ9UM73 1620 aa19.21■□□□□ 0.67
MMACHC-202ENST00000477188 MBD5Q9P267 1494 aa19.21■□□□□ 0.67
MMACHC-202ENST00000477188 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
MMACHC-202ENST00000477188 FBXO31Q5XUX0 539 aaPredicted RBP19.2■□□□□ 0.66
MMACHC-202ENST00000477188 KDM5DQ9BY66 1539 aa19.2■□□□□ 0.66
MMACHC-202ENST00000477188 PZPP20742 1482 aa19.19■□□□□ 0.66
MMACHC-202ENST00000477188 TOM1O60784 492 aa19.17■□□□□ 0.66
MMACHC-202ENST00000477188 EHBP1L1Q8N3D4 1523 aa19.16■□□□□ 0.66
MMACHC-202ENST00000477188 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
MMACHC-202ENST00000477188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.66
MMACHC-202ENST00000477188 RTEL1-TNFRSF6BF6WH68 1400 aa19.16■□□□□ 0.66
MMACHC-202ENST00000477188 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.66
MMACHC-202ENST00000477188 FAM135AQ9P2D6 1515 aa19.14■□□□□ 0.65
MMACHC-202ENST00000477188 DEPDC5O75140 1603 aa19.14■□□□□ 0.65
MMACHC-202ENST00000477188 KIF3BO15066 747 aa19.13■□□□□ 0.65
MMACHC-202ENST00000477188 IQGAP1P46940 1657 aa19.13■□□□□ 0.65
MMACHC-202ENST00000477188 UGGT1Q9NYU2 1555 aa19.12■□□□□ 0.65
MMACHC-202ENST00000477188 NPHP4O75161 1426 aaPredicted RBP19.12■□□□□ 0.65
MMACHC-202ENST00000477188 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
MMACHC-202ENST00000477188 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
MMACHC-202ENST00000477188 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
MMACHC-202ENST00000477188 MED14O60244 1454 aa19.1■□□□□ 0.65
MMACHC-202ENST00000477188 NLRP1Q9C000 1473 aa19.1■□□□□ 0.65
MMACHC-202ENST00000477188 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
MMACHC-202ENST00000477188 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
MMACHC-202ENST00000477188 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
MMACHC-202ENST00000477188 MIA2Q96PC5 1412 aa19.08■□□□□ 0.65
MMACHC-202ENST00000477188 RNF17Q9BXT8 1623 aaKnown RBP19.08■□□□□ 0.65
MMACHC-202ENST00000477188 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.65
MMACHC-202ENST00000477188 SYNMO15061 1565 aa19.07■□□□□ 0.64
MMACHC-202ENST00000477188 THEMISQ8N1K5 641 aaPredicted RBP19.06■□□□□ 0.64
MMACHC-202ENST00000477188 LRRC7Q96NW7 1537 aa19.05■□□□□ 0.64
MMACHC-202ENST00000477188 ZC3H13Q5T200 1668 aaKnown RBP19.03■□□□□ 0.64
MMACHC-202ENST00000477188 NCOA2Q15596 1464 aa19.03■□□□□ 0.64
MMACHC-202ENST00000477188 ABCC3O15438 1527 aa19.02■□□□□ 0.64
MMACHC-202ENST00000477188 ARHGEF5Q12774 1597 aa19.01■□□□□ 0.63
MMACHC-202ENST00000477188 CEP152O94986 1710 aa19■□□□□ 0.63
MMACHC-202ENST00000477188 ERVK-7P63135 1459 aa18.99■□□□□ 0.63
MMACHC-202ENST00000477188 CFAP65Q6ZU64 1925 aaKnown RBP18.99■□□□□ 0.63
MMACHC-202ENST00000477188 UBR1Q8IWV7 1749 aa18.99■□□□□ 0.63
MMACHC-202ENST00000477188 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
MMACHC-202ENST00000477188 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
MMACHC-202ENST00000477188 EIF2AK4Q9P2K8 1649 aaKnown RBP18.95■□□□□ 0.62
MMACHC-202ENST00000477188 MAST1Q9Y2H9 1570 aa18.93■□□□□ 0.62
MMACHC-202ENST00000477188 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
MMACHC-202ENST00000477188 RGS17Q9UGC6 210 aaPredicted RBP18.93■□□□□ 0.62
MMACHC-202ENST00000477188 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
MMACHC-202ENST00000477188 TSPY4P0CV99 314 aa18.9■□□□□ 0.62
MMACHC-202ENST00000477188 TSPY10P0CW01 314 aa18.9■□□□□ 0.62
MMACHC-202ENST00000477188 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
MMACHC-202ENST00000477188 SLIT1O75093 1534 aa18.88■□□□□ 0.61
MMACHC-202ENST00000477188 LTKP29376 864 aa18.87■□□□□ 0.61
MMACHC-202ENST00000477188 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
MMACHC-202ENST00000477188 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
MMACHC-202ENST00000477188 TXNDC2Q86VQ3 553 aa18.83■□□□□ 0.6
MMACHC-202ENST00000477188 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.6
MMACHC-202ENST00000477188 ROBO1Q9Y6N7 1651 aa18.82■□□□□ 0.6
MMACHC-202ENST00000477188 DUOX2Q9NRD8 1548 aa18.82■□□□□ 0.6
MMACHC-202ENST00000477188 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
MMACHC-202ENST00000477188 POTEAQ6S8J7 498 aa18.81■□□□□ 0.6
MMACHC-202ENST00000477188 FAM135BQ49AJ0 1406 aa18.8■□□□□ 0.6
MMACHC-202ENST00000477188 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
MMACHC-202ENST00000477188 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
MMACHC-202ENST00000477188 CROCC2H7BZ55 1655 aa18.79■□□□□ 0.6
MMACHC-202ENST00000477188 ARHGAP31Q2M1Z3 1444 aa18.78■□□□□ 0.6
MMACHC-202ENST00000477188 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
MMACHC-202ENST00000477188 EID1Q9Y6B2 187 aa18.76■□□□□ 0.59
MMACHC-202ENST00000477188 MYOM3Q5VTT5 1437 aa18.75■□□□□ 0.59
MMACHC-202ENST00000477188 EFCAB6Q5THR3 1501 aa18.75■□□□□ 0.59
MMACHC-202ENST00000477188 RBM33Q96EV2 1170 aaKnown RBP18.75■□□□□ 0.59
MMACHC-202ENST00000477188 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
MMACHC-202ENST00000477188 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
MMACHC-202ENST00000477188 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
MMACHC-202ENST00000477188 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
MMACHC-202ENST00000477188 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
MMACHC-202ENST00000477188 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
MMACHC-202ENST00000477188 TET3O43151 1660 aa18.72■□□□□ 0.59
MMACHC-202ENST00000477188 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
MMACHC-202ENST00000477188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
MMACHC-202ENST00000477188 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
MMACHC-202ENST00000477188 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
MMACHC-202ENST00000477188 KCNA6P17658 529 aa18.69■□□□□ 0.58
MMACHC-202ENST00000477188 PROSER2Q86WR7 435 aaPredicted RBP18.69■□□□□ 0.58
MMACHC-202ENST00000477188 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
MMACHC-202ENST00000477188 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
MMACHC-202ENST00000477188 ADGRB3O60242 1522 aa18.69■□□□□ 0.58
MMACHC-202ENST00000477188 ABCC5O15440 1437 aa18.68■□□□□ 0.58
MMACHC-202ENST00000477188 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
MMACHC-202ENST00000477188 LMTK2Q8IWU2 1503 aa18.66■□□□□ 0.58
MMACHC-202ENST00000477188 IDI1Q13907 227 aa18.66■□□□□ 0.58
MMACHC-202ENST00000477188 KANK1Q14678 1352 aa18.65■□□□□ 0.58
MMACHC-202ENST00000477188 MYO5BQ9ULV0 1848 aa18.65■□□□□ 0.58
MMACHC-202ENST00000477188 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
MMACHC-202ENST00000477188 MSH6P52701 1360 aa18.64■□□□□ 0.57
MMACHC-202ENST00000477188 DAPK1P53355 1430 aa18.64■□□□□ 0.57
MMACHC-202ENST00000477188 JCADQ9P266 1359 aa18.62■□□□□ 0.57
MMACHC-202ENST00000477188 NOS1P29475 1434 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms