RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
PRKD3-209ENST00000477132 KIF3BO15066 747 aa19.04■□□□□ 0.64
PRKD3-209ENST00000477132 MROH1Q8NDA8 1641 aa19.03■□□□□ 0.64
PRKD3-209ENST00000477132 ESF1Q9H501 851 aaKnown RBP19.03■□□□□ 0.64
PRKD3-209ENST00000477132 DUOX2Q9NRD8 1548 aa19.03■□□□□ 0.64
PRKD3-209ENST00000477132 SETD1BQ9UPS6 1966 aaKnown RBP19.02■□□□□ 0.64
PRKD3-209ENST00000477132 ZMYM3Q14202 1370 aa19.02■□□□□ 0.64
PRKD3-209ENST00000477132 KDM5DQ9BY66 1539 aa19.01■□□□□ 0.63
PRKD3-209ENST00000477132 HSPA2P54652 639 aa19■□□□□ 0.63
PRKD3-209ENST00000477132 KIF15Q9NS87 1388 aa19■□□□□ 0.63
PRKD3-209ENST00000477132 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
PRKD3-209ENST00000477132 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
PRKD3-209ENST00000477132 CEP152O94986 1710 aa18.98■□□□□ 0.63
PRKD3-209ENST00000477132 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
PRKD3-209ENST00000477132 MYO3AQ8NEV4 1616 aa18.97■□□□□ 0.63
PRKD3-209ENST00000477132 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
PRKD3-209ENST00000477132 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
PRKD3-209ENST00000477132 ZC3H13Q5T200 1668 aaKnown RBP18.97■□□□□ 0.63
PRKD3-209ENST00000477132 NPATQ14207 1427 aa18.97■□□□□ 0.63
PRKD3-209ENST00000477132 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
PRKD3-209ENST00000477132 NCOA1Q15788 1441 aa18.96■□□□□ 0.63
PRKD3-209ENST00000477132 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
PRKD3-209ENST00000477132 ERBINQ96RT1 1412 aa18.96■□□□□ 0.63
PRKD3-209ENST00000477132 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
PRKD3-209ENST00000477132 ABCC3O15438 1527 aa18.95■□□□□ 0.62
PRKD3-209ENST00000477132 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
PRKD3-209ENST00000477132 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
PRKD3-209ENST00000477132 ZNF142P52746 1687 aaPredicted RBP18.93■□□□□ 0.62
PRKD3-209ENST00000477132 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
PRKD3-209ENST00000477132 PZPP20742 1482 aa18.92■□□□□ 0.62
PRKD3-209ENST00000477132 CAMSAP1Q5T5Y3 1602 aa18.92■□□□□ 0.62
PRKD3-209ENST00000477132 WASHC2CQ9Y4E1 1318 aa18.91■□□□□ 0.62
PRKD3-209ENST00000477132 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.61
PRKD3-209ENST00000477132 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
PRKD3-209ENST00000477132 FBXO31Q5XUX0 539 aaPredicted RBP18.87■□□□□ 0.61
PRKD3-209ENST00000477132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.87■□□□□ 0.61
PRKD3-209ENST00000477132 VWDEQ8N2E2 1590 aa18.86■□□□□ 0.61
PRKD3-209ENST00000477132 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
PRKD3-209ENST00000477132 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
PRKD3-209ENST00000477132 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.61
PRKD3-209ENST00000477132 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
PRKD3-209ENST00000477132 TNRQ92752 1358 aa18.82■□□□□ 0.6
PRKD3-209ENST00000477132 ITGAEP38570 1179 aa18.82■□□□□ 0.6
PRKD3-209ENST00000477132 ERVK-7P63135 1459 aa18.82■□□□□ 0.6
PRKD3-209ENST00000477132 UNC13BO14795 1591 aa18.81■□□□□ 0.6
PRKD3-209ENST00000477132 LMTK2Q8IWU2 1503 aa18.81■□□□□ 0.6
PRKD3-209ENST00000477132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
PRKD3-209ENST00000477132 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
PRKD3-209ENST00000477132 ARHGAP31Q2M1Z3 1444 aa18.78■□□□□ 0.6
PRKD3-209ENST00000477132 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
PRKD3-209ENST00000477132 KANK1Q14678 1352 aa18.76■□□□□ 0.59
PRKD3-209ENST00000477132 PLA2R1Q13018 1463 aa18.76■□□□□ 0.59
PRKD3-209ENST00000477132 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
PRKD3-209ENST00000477132 TET3O43151 1660 aa18.74■□□□□ 0.59
PRKD3-209ENST00000477132 GCC2Q8IWJ2 1684 aa18.74■□□□□ 0.59
PRKD3-209ENST00000477132 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
PRKD3-209ENST00000477132 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
PRKD3-209ENST00000477132 SYNMO15061 1565 aa18.72■□□□□ 0.59
PRKD3-209ENST00000477132 UGGT1Q9NYU2 1555 aa18.72■□□□□ 0.59
PRKD3-209ENST00000477132 IQGAP3Q86VI3 1631 aa18.72■□□□□ 0.59
PRKD3-209ENST00000477132 PTPRTO14522 1441 aa18.71■□□□□ 0.59
PRKD3-209ENST00000477132 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.59
PRKD3-209ENST00000477132 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
PRKD3-209ENST00000477132 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
PRKD3-209ENST00000477132 E9PCH4 1651 aa18.69■□□□□ 0.58
PRKD3-209ENST00000477132 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
PRKD3-209ENST00000477132 NAIPQ13075 1403 aa18.68■□□□□ 0.58
PRKD3-209ENST00000477132 NOS1P29475 1434 aa18.67■□□□□ 0.58
PRKD3-209ENST00000477132 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
PRKD3-209ENST00000477132 RPRD2Q5VT52 1461 aaKnown RBP18.65■□□□□ 0.58
PRKD3-209ENST00000477132 PKD2Q13563 968 aa18.63■□□□□ 0.57
PRKD3-209ENST00000477132 HFM1A2PYH4 1435 aa18.63■□□□□ 0.57
PRKD3-209ENST00000477132 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
PRKD3-209ENST00000477132 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
PRKD3-209ENST00000477132 NUP155O75694 1391 aa18.62■□□□□ 0.57
PRKD3-209ENST00000477132 MYO5BQ9ULV0 1848 aa18.62■□□□□ 0.57
PRKD3-209ENST00000477132 THEMISQ8N1K5 641 aaPredicted RBP18.61■□□□□ 0.57
PRKD3-209ENST00000477132 IQGAP1P46940 1657 aa18.6■□□□□ 0.57
PRKD3-209ENST00000477132 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PRKD3-209ENST00000477132 SLIT1O75093 1534 aa18.59■□□□□ 0.57
PRKD3-209ENST00000477132 ARHGAP23Q9P227 1491 aa18.59■□□□□ 0.57
PRKD3-209ENST00000477132 MED14O60244 1454 aa18.58■□□□□ 0.57
PRKD3-209ENST00000477132 IDI1Q13907 227 aa18.58■□□□□ 0.56
PRKD3-209ENST00000477132 ILDR1Q86SU0 546 aaPredicted RBP18.58■□□□□ 0.56
PRKD3-209ENST00000477132 SPHKAPQ2M3C7 1700 aa18.57■□□□□ 0.56
PRKD3-209ENST00000477132 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
PRKD3-209ENST00000477132 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
PRKD3-209ENST00000477132 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
PRKD3-209ENST00000477132 SCAF11Q99590 1463 aaKnown RBP18.55■□□□□ 0.56
PRKD3-209ENST00000477132 CERKQ8TCT0 537 aa18.55■□□□□ 0.56
PRKD3-209ENST00000477132 TMEM131LA2VDJ0 1609 aa18.55■□□□□ 0.56
PRKD3-209ENST00000477132 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
PRKD3-209ENST00000477132 LTKP29376 864 aa18.52■□□□□ 0.56
PRKD3-209ENST00000477132 STRCP1A6NGW2 1772 aa18.51■□□□□ 0.55
PRKD3-209ENST00000477132 SLC52A1Q9NWF4 448 aa18.51■□□□□ 0.55
PRKD3-209ENST00000477132 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
PRKD3-209ENST00000477132 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
PRKD3-209ENST00000477132 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
PRKD3-209ENST00000477132 TXNDC2Q86VQ3 553 aa18.47■□□□□ 0.55
PRKD3-209ENST00000477132 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms