RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
SPTAN1-207ENST00000476825 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
SPTAN1-207ENST00000476825 CEP152O94986 1710 aa13.89□□□□□ -0.19
SPTAN1-207ENST00000476825 DHX29Q7Z478 1369 aaKnown RBP13.88□□□□□ -0.19
SPTAN1-207ENST00000476825 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
SPTAN1-207ENST00000476825 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
SPTAN1-207ENST00000476825 NAIPQ13075 1403 aa13.88□□□□□ -0.19
SPTAN1-207ENST00000476825 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
SPTAN1-207ENST00000476825 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
SPTAN1-207ENST00000476825 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
SPTAN1-207ENST00000476825 CHIC2Q9UKJ5 165 aa13.86□□□□□ -0.19
SPTAN1-207ENST00000476825 VWDEQ8N2E2 1590 aa13.86□□□□□ -0.19
SPTAN1-207ENST00000476825 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
SPTAN1-207ENST00000476825 ANKRD50Q9ULJ7 1429 aa13.84□□□□□ -0.19
SPTAN1-207ENST00000476825 IQGAP3Q86VI3 1631 aa13.84□□□□□ -0.19
SPTAN1-207ENST00000476825 ITGAEP38570 1179 aa13.84□□□□□ -0.19
SPTAN1-207ENST00000476825 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
SPTAN1-207ENST00000476825 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
SPTAN1-207ENST00000476825 KDM5DQ9BY66 1539 aa13.83□□□□□ -0.2
SPTAN1-207ENST00000476825 C3P01024 1663 aa13.82□□□□□ -0.2
SPTAN1-207ENST00000476825 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
SPTAN1-207ENST00000476825 TET3O43151 1660 aa13.81□□□□□ -0.2
SPTAN1-207ENST00000476825 ABCC3O15438 1527 aa13.8□□□□□ -0.2
SPTAN1-207ENST00000476825 LMTK2Q8IWU2 1503 aa13.79□□□□□ -0.2
SPTAN1-207ENST00000476825 E9PCH4 1651 aa13.77□□□□□ -0.21
SPTAN1-207ENST00000476825 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
SPTAN1-207ENST00000476825 EFCAB6Q5THR3 1501 aa13.76□□□□□ -0.21
SPTAN1-207ENST00000476825 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
SPTAN1-207ENST00000476825 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
SPTAN1-207ENST00000476825 KIF3BO15066 747 aa13.74□□□□□ -0.21
SPTAN1-207ENST00000476825 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-207ENST00000476825 PZPP20742 1482 aa13.73□□□□□ -0.21
SPTAN1-207ENST00000476825 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
SPTAN1-207ENST00000476825 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-207ENST00000476825 RAB3GAP2Q9H2M9 1393 aa13.72□□□□□ -0.21
SPTAN1-207ENST00000476825 SPHKAPQ2M3C7 1700 aa13.72□□□□□ -0.21
SPTAN1-207ENST00000476825 PTPRMP28827 1452 aa13.71□□□□□ -0.21
SPTAN1-207ENST00000476825 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
SPTAN1-207ENST00000476825 SPATA31D1Q6ZQQ2 1576 aa13.7□□□□□ -0.22
SPTAN1-207ENST00000476825 MLECQ14165 292 aa13.69□□□□□ -0.22
SPTAN1-207ENST00000476825 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
SPTAN1-207ENST00000476825 ARHGAP31Q2M1Z3 1444 aa13.68□□□□□ -0.22
SPTAN1-207ENST00000476825 GGT6Q6P531 493 aa13.68□□□□□ -0.22
SPTAN1-207ENST00000476825 ZNF142P52746 1687 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-207ENST00000476825 SYNMO15061 1565 aa13.67□□□□□ -0.22
SPTAN1-207ENST00000476825 PIK3C2BO00750 1634 aa13.67□□□□□ -0.22
SPTAN1-207ENST00000476825 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
SPTAN1-207ENST00000476825 NPATQ14207 1427 aa13.66□□□□□ -0.22
SPTAN1-207ENST00000476825 KANK1Q14678 1352 aa13.66□□□□□ -0.22
SPTAN1-207ENST00000476825 NUP155O75694 1391 aa13.65□□□□□ -0.22
SPTAN1-207ENST00000476825 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
SPTAN1-207ENST00000476825 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
SPTAN1-207ENST00000476825 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-207ENST00000476825 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
SPTAN1-207ENST00000476825 HRCP23327 699 aa13.63□□□□□ -0.23
SPTAN1-207ENST00000476825 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
SPTAN1-207ENST00000476825 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-207ENST00000476825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.232e-8■■□□□ 13.1
SPTAN1-207ENST00000476825 TRPM2O94759 1503 aa13.62□□□□□ -0.23
SPTAN1-207ENST00000476825 NOS1P29475 1434 aa13.62□□□□□ -0.23
SPTAN1-207ENST00000476825 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
SPTAN1-207ENST00000476825 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
SPTAN1-207ENST00000476825 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
SPTAN1-207ENST00000476825 UGGT1Q9NYU2 1555 aa13.59□□□□□ -0.23
SPTAN1-207ENST00000476825 KIF1BO60333 1816 aa13.59□□□□□ -0.23
SPTAN1-207ENST00000476825 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.23
SPTAN1-207ENST00000476825 PTPRTO14522 1441 aa13.58□□□□□ -0.24
SPTAN1-207ENST00000476825 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
SPTAN1-207ENST00000476825 PLA2R1Q13018 1463 aa13.57□□□□□ -0.24
SPTAN1-207ENST00000476825 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
SPTAN1-207ENST00000476825 TRIM52Q96A61 297 aa13.56□□□□□ -0.24
SPTAN1-207ENST00000476825 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
SPTAN1-207ENST00000476825 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
SPTAN1-207ENST00000476825 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
SPTAN1-207ENST00000476825 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
SPTAN1-207ENST00000476825 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
SPTAN1-207ENST00000476825 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
SPTAN1-207ENST00000476825 DHX57Q6P158 1386 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-207ENST00000476825 TNRQ92752 1358 aa13.54□□□□□ -0.24
SPTAN1-207ENST00000476825 LMTK3Q96Q04 1460 aa13.54□□□□□ -0.24
SPTAN1-207ENST00000476825 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-207ENST00000476825 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-207ENST00000476825 A2ML1A8K2U0 1454 aa13.53□□□□□ -0.24
SPTAN1-207ENST00000476825 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
SPTAN1-207ENST00000476825 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.25
SPTAN1-207ENST00000476825 PKD2Q13563 968 aa13.51□□□□□ -0.25
SPTAN1-207ENST00000476825 PPLO60437 1756 aa13.5□□□□□ -0.25
SPTAN1-207ENST00000476825 UHRF1BP1Q6BDS2 1440 aa13.49□□□□□ -0.25
SPTAN1-207ENST00000476825 STRCQ7RTU9 1775 aa13.49□□□□□ -0.25
SPTAN1-207ENST00000476825 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
SPTAN1-207ENST00000476825 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-207ENST00000476825 SLIT1O75093 1534 aa13.46□□□□□ -0.25
SPTAN1-207ENST00000476825 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.25
SPTAN1-207ENST00000476825 NEXMIFQ5QGS0 1516 aa13.45□□□□□ -0.26
SPTAN1-207ENST00000476825 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
SPTAN1-207ENST00000476825 SPATA31E1Q6ZUB1 1445 aa13.44□□□□□ -0.26
SPTAN1-207ENST00000476825 SLC52A1Q9NWF4 448 aa13.43□□□□□ -0.26
SPTAN1-207ENST00000476825 IDI1Q13907 227 aa13.42□□□□□ -0.26
SPTAN1-207ENST00000476825 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
SPTAN1-207ENST00000476825 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms