RNA–Protein interactions for RNA: ENST00000476461.1

PSMD2-213, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 3

Gene PSMD2, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-213ENST00000476461 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
PSMD2-213ENST00000476461 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
PSMD2-213ENST00000476461 ROCK1Q13464 1354 aa29.68■■■□□ 2.34
PSMD2-213ENST00000476461 ESF1Q9H501 851 aaKnown RBP29.68■■■□□ 2.34
PSMD2-213ENST00000476461 CNTLNQ9NXG0 1405 aa29.68■■■□□ 2.34
PSMD2-213ENST00000476461 MROH1Q8NDA8 1641 aa29.67■■■□□ 2.34
PSMD2-213ENST00000476461 MROH2AA6NES4 1674 aa29.66■■■□□ 2.34
PSMD2-213ENST00000476461 C3P01024 1663 aa29.66■■■□□ 2.34
PSMD2-213ENST00000476461 PLPPR3Q6T4P5 718 aa29.66■■■□□ 2.34
PSMD2-213ENST00000476461 PPP6R1Q9UPN7 881 aa29.65■■■□□ 2.34
PSMD2-213ENST00000476461 CEBPAP49715 358 aaPredicted RBP29.64■■■□□ 2.34
PSMD2-213ENST00000476461 KDM5DQ9BY66 1539 aa29.62■■■□□ 2.33
PSMD2-213ENST00000476461 DEPDC5O75140 1603 aa29.61■■■□□ 2.33
PSMD2-213ENST00000476461 ANKRD50Q9ULJ7 1429 aa29.61■■■□□ 2.33
PSMD2-213ENST00000476461 FAM135AQ9P2D6 1515 aa29.61■■■□□ 2.33
PSMD2-213ENST00000476461 ZMYM3Q14202 1370 aa29.59■■■□□ 2.33
PSMD2-213ENST00000476461 PRDM15P57071 1507 aaPredicted RBP29.59■■■□□ 2.33
PSMD2-213ENST00000476461 LMTK3Q96Q04 1460 aa29.58■■■□□ 2.33
PSMD2-213ENST00000476461 WASHC2CQ9Y4E1 1318 aa29.56■■■□□ 2.32
PSMD2-213ENST00000476461 ABCC3O15438 1527 aa29.55■■■□□ 2.32
PSMD2-213ENST00000476461 ZC3H13Q5T200 1668 aaKnown RBP29.55■■■□□ 2.32
PSMD2-213ENST00000476461 CEP152O94986 1710 aa29.54■■■□□ 2.32
PSMD2-213ENST00000476461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.5■■■□□ 2.316e-8■■□□□ 12.6
PSMD2-213ENST00000476461 VWDEQ8N2E2 1590 aa29.48■■■□□ 2.31
PSMD2-213ENST00000476461 HSPA2P54652 639 aa29.48■■■□□ 2.31
PSMD2-213ENST00000476461 GCC2Q8IWJ2 1684 aa29.47■■■□□ 2.31
PSMD2-213ENST00000476461 NAIPQ13075 1403 aa29.47■■■□□ 2.31
PSMD2-213ENST00000476461 CAMSAP1Q5T5Y3 1602 aa29.47■■■□□ 2.31
PSMD2-213ENST00000476461 UNC13BO14795 1591 aa29.47■■■□□ 2.31
PSMD2-213ENST00000476461 NPATQ14207 1427 aa29.46■■■□□ 2.31
PSMD2-213ENST00000476461 PREX1Q8TCU6 1659 aa29.46■■■□□ 2.31
PSMD2-213ENST00000476461 PZPP20742 1482 aa29.45■■■□□ 2.31
PSMD2-213ENST00000476461 KANK1Q14678 1352 aa29.44■■■□□ 2.3
PSMD2-213ENST00000476461 SETD1BQ9UPS6 1966 aaKnown RBP29.44■■■□□ 2.3
PSMD2-213ENST00000476461 HFM1A2PYH4 1435 aa29.43■■■□□ 2.3
PSMD2-213ENST00000476461 LMTK2Q8IWU2 1503 aa29.41■■■□□ 2.3
PSMD2-213ENST00000476461 FBXO31Q5XUX0 539 aaPredicted RBP29.4■■■□□ 2.3
PSMD2-213ENST00000476461 UHRF1BP1Q6BDS2 1440 aa29.37■■■□□ 2.29
PSMD2-213ENST00000476461 ARHGAP31Q2M1Z3 1444 aa29.36■■■□□ 2.29
PSMD2-213ENST00000476461 MYO3AQ8NEV4 1616 aa29.34■■■□□ 2.29
PSMD2-213ENST00000476461 EFCAB6Q5THR3 1501 aa29.34■■■□□ 2.29
PSMD2-213ENST00000476461 IQGAP3Q86VI3 1631 aa29.34■■■□□ 2.29
PSMD2-213ENST00000476461 CFAP65Q6ZU64 1925 aaKnown RBP29.33■■■□□ 2.29
PSMD2-213ENST00000476461 SPATA31D1Q6ZQQ2 1576 aa29.32■■■□□ 2.28
PSMD2-213ENST00000476461 TET3O43151 1660 aa29.31■■■□□ 2.28
PSMD2-213ENST00000476461 ERVK-7P63135 1459 aa29.31■■■□□ 2.28
PSMD2-213ENST00000476461 TNRQ92752 1358 aa29.31■■■□□ 2.28
PSMD2-213ENST00000476461 NUP155O75694 1391 aa29.3■■■□□ 2.28
PSMD2-213ENST00000476461 ZNF142P52746 1687 aaPredicted RBP29.28■■■□□ 2.28
PSMD2-213ENST00000476461 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.27
PSMD2-213ENST00000476461 CERKQ8TCT0 537 aa29.24■■■□□ 2.27
PSMD2-213ENST00000476461 E9PCH4 1651 aa29.23■■■□□ 2.27
PSMD2-213ENST00000476461 A2ML1A8K2U0 1454 aa29.21■■■□□ 2.27
PSMD2-213ENST00000476461 RPRD2Q5VT52 1461 aaKnown RBP29.21■■■□□ 2.27
PSMD2-213ENST00000476461 NLRP1Q9C000 1473 aa29.2■■■□□ 2.26
PSMD2-213ENST00000476461 SETD5Q9C0A6 1442 aa29.2■■■□□ 2.26
PSMD2-213ENST00000476461 NOS1P29475 1434 aa29.18■■■□□ 2.26
PSMD2-213ENST00000476461 SYNMO15061 1565 aa29.18■■■□□ 2.26
PSMD2-213ENST00000476461 TRIM52Q96A61 297 aa29.16■■■□□ 2.26
PSMD2-213ENST00000476461 STRCQ7RTU9 1775 aa29.12■■■□□ 2.25
PSMD2-213ENST00000476461 UGGT1Q9NYU2 1555 aa29.11■■■□□ 2.25
PSMD2-213ENST00000476461 RAB3GAP2Q9H2M9 1393 aa29.11■■■□□ 2.25
PSMD2-213ENST00000476461 PIK3C2BO00750 1634 aa29.09■■■□□ 2.25
PSMD2-213ENST00000476461 UBR1Q8IWV7 1749 aa29.08■■■□□ 2.25
PSMD2-213ENST00000476461 PLA2R1Q13018 1463 aa29.05■■■□□ 2.24
PSMD2-213ENST00000476461 IDI1Q13907 227 aa29.05■■■□□ 2.24
PSMD2-213ENST00000476461 SPHKAPQ2M3C7 1700 aa29.04■■■□□ 2.24
PSMD2-213ENST00000476461 SLC4A1APQ9BWU0 796 aaKnown RBP29.04■■■□□ 2.24
PSMD2-213ENST00000476461 PKD2Q13563 968 aa29.02■■■□□ 2.24
PSMD2-213ENST00000476461 ILDR2Q71H61 639 aa29.02■■■□□ 2.24
PSMD2-213ENST00000476461 THEMISQ8N1K5 641 aaPredicted RBP29.02■■■□□ 2.24
PSMD2-213ENST00000476461 SLC52A1Q9NWF4 448 aa29.01■■■□□ 2.23
PSMD2-213ENST00000476461 PTPRTO14522 1441 aa29.01■■■□□ 2.23
PSMD2-213ENST00000476461 KDM5AP29375 1690 aaKnown RBP29■■■□□ 2.23
PSMD2-213ENST00000476461 DISP3Q9P2K9 1392 aa29■■■□□ 2.23
PSMD2-213ENST00000476461 NCKAP5LQ9HCH0 1330 aa28.98■■■□□ 2.23
PSMD2-213ENST00000476461 ACIN1Q9UKV3 1341 aaKnown RBP28.98■■■□□ 2.23
PSMD2-213ENST00000476461 MPHOSPH9Q99550 1183 aa28.98■■■□□ 2.23
PSMD2-213ENST00000476461 ADGRB3O60242 1522 aa28.98■■■□□ 2.23
PSMD2-213ENST00000476461 POLR1AO95602 1720 aaPredicted RBP28.96■■■□□ 2.23
PSMD2-213ENST00000476461 TRPM2O94759 1503 aa28.94■■■□□ 2.22
PSMD2-213ENST00000476461 HRCP23327 699 aa28.94■■■□□ 2.22
PSMD2-213ENST00000476461 MYO5BQ9ULV0 1848 aa28.94■■■□□ 2.22
PSMD2-213ENST00000476461 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
PSMD2-213ENST00000476461 TRIM26Q12899 539 aaPredicted RBP28.93■■■□□ 2.22
PSMD2-213ENST00000476461 FOXD1Q16676 465 aa28.93■■■□□ 2.22
PSMD2-213ENST00000476461 STAG3Q9UJ98 1225 aa28.93■■■□□ 2.22
PSMD2-213ENST00000476461 NEURL4Q96JN8 1562 aa28.92■■■□□ 2.22
PSMD2-213ENST00000476461 ARHGAP23Q9P227 1491 aa28.92■■■□□ 2.22
PSMD2-213ENST00000476461 SLIT1O75093 1534 aa28.92■■■□□ 2.22
PSMD2-213ENST00000476461 CLTCL1P53675 1640 aa28.91■■■□□ 2.22
PSMD2-213ENST00000476461 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
PSMD2-213ENST00000476461 DMRT2Q9Y5R5 561 aa28.89■■■□□ 2.22
PSMD2-213ENST00000476461 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
PSMD2-213ENST00000476461 CHGAP10645 457 aaKnown RBP28.84■■■□□ 2.21
PSMD2-213ENST00000476461 LTKP29376 864 aa28.84■■■□□ 2.21
PSMD2-213ENST00000476461 MED14O60244 1454 aa28.84■■■□□ 2.21
PSMD2-213ENST00000476461 SCAF11Q99590 1463 aaKnown RBP28.84■■■□□ 2.21
PSMD2-213ENST00000476461 SOCS7O14512 581 aa28.81■■■□□ 2.2
PSMD2-213ENST00000476461 TXNDC2Q86VQ3 553 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms