RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 NPATQ14207 1427 aa14.57□□□□□ -0.08
SEMA3C-208ENST00000475955 PTPRKQ15262 1439 aa14.57□□□□□ -0.08
SEMA3C-208ENST00000475955 RNF17Q9BXT8 1623 aaKnown RBP14.56□□□□□ -0.08
SEMA3C-208ENST00000475955 MYO3AQ8NEV4 1616 aa14.55□□□□□ -0.08
SEMA3C-208ENST00000475955 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
SEMA3C-208ENST00000475955 MROH1Q8NDA8 1641 aa14.55□□□□□ -0.08
SEMA3C-208ENST00000475955 ILDR1Q86SU0 546 aaPredicted RBP14.54□□□□□ -0.08
SEMA3C-208ENST00000475955 EIF2AK4Q9P2K8 1649 aaKnown RBP14.54□□□□□ -0.08
SEMA3C-208ENST00000475955 ZNF142P52746 1687 aaPredicted RBP14.54□□□□□ -0.08
SEMA3C-208ENST00000475955 CFAP65Q6ZU64 1925 aaKnown RBP14.53□□□□□ -0.08
SEMA3C-208ENST00000475955 KDM5DQ9BY66 1539 aa14.53□□□□□ -0.08
SEMA3C-208ENST00000475955 DAPK1P53355 1430 aa14.53□□□□□ -0.08
SEMA3C-208ENST00000475955 CEP152O94986 1710 aa14.52□□□□□ -0.08
SEMA3C-208ENST00000475955 SHANK2Q9UPX8 1470 aa14.52□□□□□ -0.08
SEMA3C-208ENST00000475955 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
SEMA3C-208ENST00000475955 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
SEMA3C-208ENST00000475955 FBXO31Q5XUX0 539 aaPredicted RBP14.5□□□□□ -0.09
SEMA3C-208ENST00000475955 CAMSAP1Q5T5Y3 1602 aa14.5□□□□□ -0.09
SEMA3C-208ENST00000475955 CEP170BQ9Y4F5 1589 aaPredicted RBP14.5□□□□□ -0.09
SEMA3C-208ENST00000475955 ABCC3O15438 1527 aa14.49□□□□□ -0.09
SEMA3C-208ENST00000475955 ZC3H13Q5T200 1668 aaKnown RBP14.49□□□□□ -0.09
SEMA3C-208ENST00000475955 PZPP20742 1482 aa14.48□□□□□ -0.09
SEMA3C-208ENST00000475955 NCOA1Q15788 1441 aa14.48□□□□□ -0.09
SEMA3C-208ENST00000475955 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
SEMA3C-208ENST00000475955 WASHC2CQ9Y4E1 1318 aa14.47□□□□□ -0.09
SEMA3C-208ENST00000475955 RRP7BPQ9NSQ0 103 aa14.47□□□□□ -0.09
SEMA3C-208ENST00000475955 DEPDC5O75140 1603 aa14.47□□□□□ -0.09
SEMA3C-208ENST00000475955 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
SEMA3C-208ENST00000475955 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
SEMA3C-208ENST00000475955 ERBINQ96RT1 1412 aa14.44□□□□□ -0.1
SEMA3C-208ENST00000475955 A2ML1A8K2U0 1454 aa14.44□□□□□ -0.1
SEMA3C-208ENST00000475955 ADGRL2O95490 1459 aa14.44□□□□□ -0.1
SEMA3C-208ENST00000475955 PTPRTO14522 1441 aa14.43□□□□□ -0.1
SEMA3C-208ENST00000475955 FAM50AQ14320 339 aaKnown RBP14.43□□□□□ -0.1
SEMA3C-208ENST00000475955 TNRQ92752 1358 aa14.43□□□□□ -0.1
SEMA3C-208ENST00000475955 NCKAP5LQ9HCH0 1330 aa14.42□□□□□ -0.1
SEMA3C-208ENST00000475955 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
SEMA3C-208ENST00000475955 SPATA31D1Q6ZQQ2 1576 aa14.42□□□□□ -0.1
SEMA3C-208ENST00000475955 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
SEMA3C-208ENST00000475955 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
SEMA3C-208ENST00000475955 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
SEMA3C-208ENST00000475955 POLR1AO95602 1720 aaPredicted RBP14.41□□□□□ -0.1
SEMA3C-208ENST00000475955 VWDEQ8N2E2 1590 aa14.4□□□□□ -0.1
SEMA3C-208ENST00000475955 ERVK-7P63135 1459 aa14.39□□□□□ -0.11
SEMA3C-208ENST00000475955 CERKQ8TCT0 537 aa14.39□□□□□ -0.11
SEMA3C-208ENST00000475955 FBXO41Q8TF61 875 aa14.39□□□□□ -0.11
SEMA3C-208ENST00000475955 LTBP4Q8N2S1 1624 aa14.39□□□□□ -0.11
SEMA3C-208ENST00000475955 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
SEMA3C-208ENST00000475955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
SEMA3C-208ENST00000475955 NLRP1Q9C000 1473 aa14.37□□□□□ -0.11
SEMA3C-208ENST00000475955 UBR1Q8IWV7 1749 aa14.36□□□□□ -0.11
SEMA3C-208ENST00000475955 ARHGAP31Q2M1Z3 1444 aa14.36□□□□□ -0.11
SEMA3C-208ENST00000475955 UGGT1Q9NYU2 1555 aa14.35□□□□□ -0.11
SEMA3C-208ENST00000475955 LMTK2Q8IWU2 1503 aa14.35□□□□□ -0.11
SEMA3C-208ENST00000475955 PKD2Q13563 968 aa14.34□□□□□ -0.11
SEMA3C-208ENST00000475955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.11
SEMA3C-208ENST00000475955 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.11
SEMA3C-208ENST00000475955 PIK3C2BO00750 1634 aa14.32□□□□□ -0.12
SEMA3C-208ENST00000475955 EFCAB6Q5THR3 1501 aa14.31□□□□□ -0.12
SEMA3C-208ENST00000475955 UNC13BO14795 1591 aa14.31□□□□□ -0.12
SEMA3C-208ENST00000475955 SYNMO15061 1565 aa14.31□□□□□ -0.12
SEMA3C-208ENST00000475955 ZNF335Q9H4Z2 1342 aaPredicted RBP14.31□□□□□ -0.12
SEMA3C-208ENST00000475955 THEMISQ8N1K5 641 aaPredicted RBP14.3□□□□□ -0.12
SEMA3C-208ENST00000475955 ROCK1Q13464 1354 aa14.3□□□□□ -0.12
SEMA3C-208ENST00000475955 KANK1Q14678 1352 aa14.3□□□□□ -0.12
SEMA3C-208ENST00000475955 TET3O43151 1660 aa14.3□□□□□ -0.12
SEMA3C-208ENST00000475955 ITGAEP38570 1179 aa14.29□□□□□ -0.12
SEMA3C-208ENST00000475955 GCC2Q8IWJ2 1684 aa14.29□□□□□ -0.12
SEMA3C-208ENST00000475955 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
SEMA3C-208ENST00000475955 MED14O60244 1454 aa14.28□□□□□ -0.12
SEMA3C-208ENST00000475955 IQGAP1P46940 1657 aa14.28□□□□□ -0.12
SEMA3C-208ENST00000475955 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
SEMA3C-208ENST00000475955 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.12
SEMA3C-208ENST00000475955 E9PCH4 1651 aa14.27□□□□□ -0.12
SEMA3C-208ENST00000475955 NOS1P29475 1434 aa14.27□□□□□ -0.12
SEMA3C-208ENST00000475955 ANKLE2Q86XL3 938 aa14.27□□□□□ -0.13
SEMA3C-208ENST00000475955 ARHGAP23Q9P227 1491 aa14.26□□□□□ -0.13
SEMA3C-208ENST00000475955 CCER1Q8TC90 406 aaPredicted RBP14.26□□□□□ -0.13
SEMA3C-208ENST00000475955 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
SEMA3C-208ENST00000475955 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
SEMA3C-208ENST00000475955 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
SEMA3C-208ENST00000475955 SLIT1O75093 1534 aa14.25□□□□□ -0.13
SEMA3C-208ENST00000475955 IDI1Q13907 227 aa14.24□□□□□ -0.13
SEMA3C-208ENST00000475955 LTKP29376 864 aa14.23□□□□□ -0.13
SEMA3C-208ENST00000475955 IQSEC2Q5JU85 1478 aa14.23□□□□□ -0.13
SEMA3C-208ENST00000475955 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
SEMA3C-208ENST00000475955 SCAF11Q99590 1463 aaKnown RBP14.21□□□□□ -0.13
SEMA3C-208ENST00000475955 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
SEMA3C-208ENST00000475955 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
SEMA3C-208ENST00000475955 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
SEMA3C-208ENST00000475955 TXNDC2Q86VQ3 553 aa14.18□□□□□ -0.14
SEMA3C-208ENST00000475955 NUP155O75694 1391 aa14.18□□□□□ -0.14
SEMA3C-208ENST00000475955 XIRP1Q702N8 1843 aaKnown RBP14.18□□□□□ -0.14
SEMA3C-208ENST00000475955 NAIPQ13075 1403 aa14.17□□□□□ -0.14
SEMA3C-208ENST00000475955 CPS1P31327 1500 aa14.17□□□□□ -0.14
SEMA3C-208ENST00000475955 SLC52A1Q9NWF4 448 aa14.16□□□□□ -0.14
SEMA3C-208ENST00000475955 SPHKAPQ2M3C7 1700 aa14.15□□□□□ -0.14
SEMA3C-208ENST00000475955 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
SEMA3C-208ENST00000475955 ALKQ9UM73 1620 aa14.15□□□□□ -0.14
SEMA3C-208ENST00000475955 LRRC7Q96NW7 1537 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms