RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 ADGBQ8N7X0 1667 aa23.52■■□□□ 1.36
TRIM11-203ENST00000475775 A2ML1A8K2U0 1454 aa23.51■■□□□ 1.35
TRIM11-203ENST00000475775 MBD5Q9P267 1494 aa23.51■■□□□ 1.35
TRIM11-203ENST00000475775 CPS1P31327 1500 aa23.51■■□□□ 1.35
TRIM11-203ENST00000475775 PHF23Q9BUL5 403 aaPredicted RBP23.5■■□□□ 1.35
TRIM11-203ENST00000475775 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
TRIM11-203ENST00000475775 SHANK2Q9UPX8 1470 aa23.49■■□□□ 1.35
TRIM11-203ENST00000475775 ZNF644Q9H582 1327 aaPredicted RBP23.48■■□□□ 1.35
TRIM11-203ENST00000475775 CCDC141Q6ZP82 1450 aa23.47■■□□□ 1.35
TRIM11-203ENST00000475775 NEURL4Q96JN8 1562 aa23.47■■□□□ 1.35
TRIM11-203ENST00000475775 RSPH4AQ5TD94 716 aa23.46■■□□□ 1.35
TRIM11-203ENST00000475775 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
TRIM11-203ENST00000475775 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.34
TRIM11-203ENST00000475775 DHX29Q7Z478 1369 aaKnown RBP23.42■■□□□ 1.34
TRIM11-203ENST00000475775 FBXO31Q5XUX0 539 aaPredicted RBP23.41■■□□□ 1.34
TRIM11-203ENST00000475775 ALKQ9UM73 1620 aa23.4■■□□□ 1.34
TRIM11-203ENST00000475775 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
TRIM11-203ENST00000475775 FAM135AQ9P2D6 1515 aa23.39■■□□□ 1.34
TRIM11-203ENST00000475775 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.34
TRIM11-203ENST00000475775 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.33
TRIM11-203ENST00000475775 TNRQ92752 1358 aa23.38■■□□□ 1.33
TRIM11-203ENST00000475775 ARHGEF5Q12774 1597 aa23.37■■□□□ 1.33
TRIM11-203ENST00000475775 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TRIM11-203ENST00000475775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.36■■□□□ 1.33
TRIM11-203ENST00000475775 MAP3K1Q13233 1512 aa23.35■■□□□ 1.33
TRIM11-203ENST00000475775 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
TRIM11-203ENST00000475775 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
TRIM11-203ENST00000475775 STRCP1A6NGW2 1772 aa23.35■■□□□ 1.33
TRIM11-203ENST00000475775 KDM5DQ9BY66 1539 aa23.34■■□□□ 1.33
TRIM11-203ENST00000475775 THEMISQ8N1K5 641 aaPredicted RBP23.34■■□□□ 1.33
TRIM11-203ENST00000475775 KIF3BO15066 747 aa23.32■■□□□ 1.32
TRIM11-203ENST00000475775 DEPDC5O75140 1603 aa23.32■■□□□ 1.32
TRIM11-203ENST00000475775 PZPP20742 1482 aa23.31■■□□□ 1.32
TRIM11-203ENST00000475775 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
TRIM11-203ENST00000475775 NPHP4O75161 1426 aaPredicted RBP23.31■■□□□ 1.32
TRIM11-203ENST00000475775 MED14O60244 1454 aa23.3■■□□□ 1.32
TRIM11-203ENST00000475775 IQGAP1P46940 1657 aa23.3■■□□□ 1.32
TRIM11-203ENST00000475775 UGGT1Q9NYU2 1555 aa23.29■■□□□ 1.32
TRIM11-203ENST00000475775 MIA2Q96PC5 1412 aa23.28■■□□□ 1.32
TRIM11-203ENST00000475775 WASHC2CQ9Y4E1 1318 aa23.28■■□□□ 1.32
TRIM11-203ENST00000475775 CFAP65Q6ZU64 1925 aaKnown RBP23.27■■□□□ 1.32
TRIM11-203ENST00000475775 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
TRIM11-203ENST00000475775 MYOM3Q5VTT5 1437 aa23.25■■□□□ 1.31
TRIM11-203ENST00000475775 NLRP1Q9C000 1473 aa23.25■■□□□ 1.31
TRIM11-203ENST00000475775 LRRC7Q96NW7 1537 aa23.25■■□□□ 1.31
TRIM11-203ENST00000475775 RGS17Q9UGC6 210 aaPredicted RBP23.25■■□□□ 1.31
TRIM11-203ENST00000475775 RNF17Q9BXT8 1623 aaKnown RBP23.24■■□□□ 1.31
TRIM11-203ENST00000475775 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
TRIM11-203ENST00000475775 SYNMO15061 1565 aa23.2■■□□□ 1.3
TRIM11-203ENST00000475775 APLP2Q06481 763 aa23.2■■□□□ 1.3
TRIM11-203ENST00000475775 KANK4Q5T7N3 995 aaPredicted RBP23.2■■□□□ 1.3
TRIM11-203ENST00000475775 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
TRIM11-203ENST00000475775 XIRP1Q702N8 1843 aaKnown RBP23.17■■□□□ 1.3
TRIM11-203ENST00000475775 ABCC3O15438 1527 aa23.13■■□□□ 1.29
TRIM11-203ENST00000475775 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
TRIM11-203ENST00000475775 UBR1Q8IWV7 1749 aa23.11■■□□□ 1.29
TRIM11-203ENST00000475775 ERBINQ96RT1 1412 aa23.08■■□□□ 1.29
TRIM11-203ENST00000475775 POTEAQ6S8J7 498 aa23.08■■□□□ 1.29
TRIM11-203ENST00000475775 PTPN23Q9H3S7 1636 aa23.08■■□□□ 1.28
TRIM11-203ENST00000475775 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
TRIM11-203ENST00000475775 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
TRIM11-203ENST00000475775 MROH1Q8NDA8 1641 aa23.06■■□□□ 1.28
TRIM11-203ENST00000475775 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
TRIM11-203ENST00000475775 PRDM15P57071 1507 aaPredicted RBP23.04■■□□□ 1.28
TRIM11-203ENST00000475775 ABCC5O15440 1437 aa23.04■■□□□ 1.28
TRIM11-203ENST00000475775 CEP152O94986 1710 aa23.04■■□□□ 1.28
TRIM11-203ENST00000475775 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
TRIM11-203ENST00000475775 DAPK1P53355 1430 aa23.03■■□□□ 1.28
TRIM11-203ENST00000475775 FGD6Q6ZV73 1430 aa23.03■■□□□ 1.28
TRIM11-203ENST00000475775 LTKP29376 864 aa23.02■■□□□ 1.28
TRIM11-203ENST00000475775 TXNDC2Q86VQ3 553 aa23.02■■□□□ 1.28
TRIM11-203ENST00000475775 FAM135BQ49AJ0 1406 aa23■■□□□ 1.27
TRIM11-203ENST00000475775 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
TRIM11-203ENST00000475775 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
TRIM11-203ENST00000475775 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
TRIM11-203ENST00000475775 KANK1Q14678 1352 aa22.98■■□□□ 1.27
TRIM11-203ENST00000475775 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
TRIM11-203ENST00000475775 SLIT1O75093 1534 aa22.97■■□□□ 1.27
TRIM11-203ENST00000475775 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
TRIM11-203ENST00000475775 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
TRIM11-203ENST00000475775 EID1Q9Y6B2 187 aa22.94■■□□□ 1.26
TRIM11-203ENST00000475775 TMEM94Q12767 1356 aa22.9■■□□□ 1.26
TRIM11-203ENST00000475775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRIM11-203ENST00000475775 LMTK2Q8IWU2 1503 aa22.89■■□□□ 1.26
TRIM11-203ENST00000475775 PIK3C2BO00750 1634 aa22.89■■□□□ 1.25
TRIM11-203ENST00000475775 ADGRL2O95490 1459 aa22.87■■□□□ 1.25
TRIM11-203ENST00000475775 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
TRIM11-203ENST00000475775 CHIC2Q9UKJ5 165 aa22.87■■□□□ 1.25
TRIM11-203ENST00000475775 PHLPP1O60346 1717 aa22.87■■□□□ 1.25
TRIM11-203ENST00000475775 PROSER2Q86WR7 435 aaPredicted RBP22.86■■□□□ 1.25
TRIM11-203ENST00000475775 KCNA6P17658 529 aa22.85■■□□□ 1.25
TRIM11-203ENST00000475775 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
TRIM11-203ENST00000475775 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
TRIM11-203ENST00000475775 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
TRIM11-203ENST00000475775 SLC26A8Q96RN1 970 aa22.82■■□□□ 1.24
TRIM11-203ENST00000475775 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
TRIM11-203ENST00000475775 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
TRIM11-203ENST00000475775 TET3O43151 1660 aa22.8■■□□□ 1.24
TRIM11-203ENST00000475775 JCADQ9P266 1359 aa22.78■■□□□ 1.24
TRIM11-203ENST00000475775 ANKRD50Q9ULJ7 1429 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms