RNA–Protein interactions for RNA: ENST00000475548.5

SMTN-216, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-216ENST00000475548 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
SMTN-216ENST00000475548 HFM1A2PYH4 1435 aa26.73■■□□□ 1.87
SMTN-216ENST00000475548 NAIPQ13075 1403 aa26.73■■□□□ 1.87
SMTN-216ENST00000475548 RIMS1Q86UR5 1692 aaKnown RBP26.72■■□□□ 1.87
SMTN-216ENST00000475548 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
SMTN-216ENST00000475548 GCC2Q8IWJ2 1684 aa26.7■■□□□ 1.87
SMTN-216ENST00000475548 FAM135AQ9P2D6 1515 aa26.7■■□□□ 1.86
SMTN-216ENST00000475548 WASHC2CQ9Y4E1 1318 aa26.69■■□□□ 1.86
SMTN-216ENST00000475548 DEPDC5O75140 1603 aa26.69■■□□□ 1.86
SMTN-216ENST00000475548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.68■■□□□ 1.86
SMTN-216ENST00000475548 MROH1Q8NDA8 1641 aa26.68■■□□□ 1.86
SMTN-216ENST00000475548 PTPRMP28827 1452 aa26.68■■□□□ 1.86
SMTN-216ENST00000475548 KANK1Q14678 1352 aa26.67■■□□□ 1.86
SMTN-216ENST00000475548 CLTCQ00610 1675 aaKnown RBP26.66■■□□□ 1.86
SMTN-216ENST00000475548 PRDM15P57071 1507 aaPredicted RBP26.66■■□□□ 1.86
SMTN-216ENST00000475548 KDM5DQ9BY66 1539 aa26.66■■□□□ 1.86
SMTN-216ENST00000475548 MROH2AA6NES4 1674 aa26.64■■□□□ 1.86
SMTN-216ENST00000475548 TRIM26Q12899 539 aaPredicted RBP26.63■■□□□ 1.85
SMTN-216ENST00000475548 ZC3H13Q5T200 1668 aaKnown RBP26.63■■□□□ 1.85
SMTN-216ENST00000475548 ZMYM3Q14202 1370 aa26.62■■□□□ 1.85
SMTN-216ENST00000475548 UNC13BO14795 1591 aa26.61■■□□□ 1.85
SMTN-216ENST00000475548 ABCC3O15438 1527 aa26.6■■□□□ 1.85
SMTN-216ENST00000475548 VWDEQ8N2E2 1590 aa26.58■■□□□ 1.85
SMTN-216ENST00000475548 SETD5Q9C0A6 1442 aa26.58■■□□□ 1.85
SMTN-216ENST00000475548 PLPPR3Q6T4P5 718 aa26.58■■□□□ 1.85
SMTN-216ENST00000475548 CEP152O94986 1710 aa26.58■■□□□ 1.85
SMTN-216ENST00000475548 C3P01024 1663 aa26.57■■□□□ 1.84
SMTN-216ENST00000475548 CEBPAP49715 358 aaPredicted RBP26.57■■□□□ 1.84
SMTN-216ENST00000475548 NUP155O75694 1391 aa26.56■■□□□ 1.84
SMTN-216ENST00000475548 ACIN1Q9UKV3 1341 aaKnown RBP26.55■■□□□ 1.84
SMTN-216ENST00000475548 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
SMTN-216ENST00000475548 CAMSAP1Q5T5Y3 1602 aa26.52■■□□□ 1.84
SMTN-216ENST00000475548 TRIM52Q96A61 297 aa26.51■■□□□ 1.83
SMTN-216ENST00000475548 IQGAP3Q86VI3 1631 aa26.5■■□□□ 1.83
SMTN-216ENST00000475548 PZPP20742 1482 aa26.49■■□□□ 1.83
SMTN-216ENST00000475548 ARHGAP31Q2M1Z3 1444 aa26.48■■□□□ 1.83
SMTN-216ENST00000475548 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
SMTN-216ENST00000475548 NPATQ14207 1427 aa26.48■■□□□ 1.83
SMTN-216ENST00000475548 SETD1BQ9UPS6 1966 aaKnown RBP26.47■■□□□ 1.83
SMTN-216ENST00000475548 TET3O43151 1660 aa26.47■■□□□ 1.83
SMTN-216ENST00000475548 HRCP23327 699 aa26.46■■□□□ 1.83
SMTN-216ENST00000475548 EFCAB6Q5THR3 1501 aa26.44■■□□□ 1.82
SMTN-216ENST00000475548 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
SMTN-216ENST00000475548 CFAP65Q6ZU64 1925 aaKnown RBP26.42■■□□□ 1.82
SMTN-216ENST00000475548 RPRD2Q5VT52 1461 aaKnown RBP26.41■■□□□ 1.82
SMTN-216ENST00000475548 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
SMTN-216ENST00000475548 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
SMTN-216ENST00000475548 SPATA31D1Q6ZQQ2 1576 aa26.37■■□□□ 1.81
SMTN-216ENST00000475548 ERVK-7P63135 1459 aa26.37■■□□□ 1.81
SMTN-216ENST00000475548 TNRQ92752 1358 aa26.37■■□□□ 1.81
SMTN-216ENST00000475548 E9PCH4 1651 aa26.37■■□□□ 1.81
SMTN-216ENST00000475548 UHRF1BP1Q6BDS2 1440 aa26.34■■□□□ 1.81
SMTN-216ENST00000475548 MPHOSPH9Q99550 1183 aa26.34■■□□□ 1.81
SMTN-216ENST00000475548 PKD2Q13563 968 aa26.32■■□□□ 1.8
SMTN-216ENST00000475548 NOS1P29475 1434 aa26.31■■□□□ 1.8
SMTN-216ENST00000475548 MYO3AQ8NEV4 1616 aa26.29■■□□□ 1.8
SMTN-216ENST00000475548 ILDR1Q86SU0 546 aaPredicted RBP26.29■■□□□ 1.8
SMTN-216ENST00000475548 NLRP1Q9C000 1473 aa26.29■■□□□ 1.8
SMTN-216ENST00000475548 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
SMTN-216ENST00000475548 LMTK3Q96Q04 1460 aa26.27■■□□□ 1.8
SMTN-216ENST00000475548 SLC52A1Q9NWF4 448 aa26.25■■□□□ 1.79
SMTN-216ENST00000475548 SYNMO15061 1565 aa26.24■■□□□ 1.79
SMTN-216ENST00000475548 CEP170BQ9Y4F5 1589 aaPredicted RBP26.24■■□□□ 1.79
SMTN-216ENST00000475548 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
SMTN-216ENST00000475548 SPHKAPQ2M3C7 1700 aa26.23■■□□□ 1.79
SMTN-216ENST00000475548 ZNF142P52746 1687 aaPredicted RBP26.23■■□□□ 1.79
SMTN-216ENST00000475548 PTPRTO14522 1441 aa26.22■■□□□ 1.79
SMTN-216ENST00000475548 IDI1Q13907 227 aa26.21■■□□□ 1.79
SMTN-216ENST00000475548 FOXD1Q16676 465 aa26.2■■□□□ 1.78
SMTN-216ENST00000475548 UGGT1Q9NYU2 1555 aa26.17■■□□□ 1.78
SMTN-216ENST00000475548 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
SMTN-216ENST00000475548 TRPM2O94759 1503 aa26.16■■□□□ 1.78
SMTN-216ENST00000475548 HSPA2P54652 639 aa26.16■■□□□ 1.78
SMTN-216ENST00000475548 STAG3Q9UJ98 1225 aa26.16■■□□□ 1.78
SMTN-216ENST00000475548 PIK3C2BO00750 1634 aa26.16■■□□□ 1.78
SMTN-216ENST00000475548 PLA2R1Q13018 1463 aa26.15■■□□□ 1.78
SMTN-216ENST00000475548 UBR1Q8IWV7 1749 aa26.13■■□□□ 1.77
SMTN-216ENST00000475548 KDM5AP29375 1690 aaKnown RBP26.12■■□□□ 1.77
SMTN-216ENST00000475548 ADGRB3O60242 1522 aa26.09■■□□□ 1.77
SMTN-216ENST00000475548 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
SMTN-216ENST00000475548 CHGAP10645 457 aaKnown RBP26.08■■□□□ 1.77
SMTN-216ENST00000475548 CCDC144AA2RUR9 1427 aa26.06■■□□□ 1.76
SMTN-216ENST00000475548 TMEM131LA2VDJ0 1609 aa26.06■■□□□ 1.76
SMTN-216ENST00000475548 ANKRD30BQ9BXX2 1392 aa26.05■■□□□ 1.76
SMTN-216ENST00000475548 KIF1BO60333 1816 aa26.04■■□□□ 1.76
SMTN-216ENST00000475548 MYO5BQ9ULV0 1848 aa26.02■■□□□ 1.76
SMTN-216ENST00000475548 ANKLE2Q86XL3 938 aa26.02■■□□□ 1.76
SMTN-216ENST00000475548 DHX57Q6P158 1386 aaKnown RBP26.02■■□□□ 1.76
SMTN-216ENST00000475548 SLIT1O75093 1534 aa26.01■■□□□ 1.75
SMTN-216ENST00000475548 TMEM2Q9UHN6 1383 aa26.01■■□□□ 1.75
SMTN-216ENST00000475548 ARHGAP23Q9P227 1491 aa25.99■■□□□ 1.75
SMTN-216ENST00000475548 HDGFP51858 240 aaKnown RBP25.99■■□□□ 1.75
SMTN-216ENST00000475548 EID1Q9Y6B2 187 aa25.99■■□□□ 1.75
SMTN-216ENST00000475548 STRCQ7RTU9 1775 aa25.99■■□□□ 1.75
SMTN-216ENST00000475548 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
SMTN-216ENST00000475548 ZNF326Q5BKZ1 582 aaKnown RBP25.97■■□□□ 1.75
SMTN-216ENST00000475548 TXNDC2Q86VQ3 553 aa25.97■■□□□ 1.75
SMTN-216ENST00000475548 DMRT2Q9Y5R5 561 aa25.96■■□□□ 1.75
SMTN-216ENST00000475548 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.74
SMTN-216ENST00000475548 LTKP29376 864 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms