RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
PTP4A2-204ENST00000475464 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
PTP4A2-204ENST00000475464 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
PTP4A2-204ENST00000475464 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
PTP4A2-204ENST00000475464 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.2
PTP4A2-204ENST00000475464 EHBP1L1Q8N3D4 1523 aa16.27■□□□□ 0.2
PTP4A2-204ENST00000475464 TOM1O60784 492 aa16.26■□□□□ 0.19
PTP4A2-204ENST00000475464 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
PTP4A2-204ENST00000475464 ADGBQ8N7X0 1667 aa16.26■□□□□ 0.19
PTP4A2-204ENST00000475464 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
PTP4A2-204ENST00000475464 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
PTP4A2-204ENST00000475464 HSPA1LP34931 641 aa16.23■□□□□ 0.19
PTP4A2-204ENST00000475464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.191e-9■■□□□ 12.2
PTP4A2-204ENST00000475464 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
PTP4A2-204ENST00000475464 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
PTP4A2-204ENST00000475464 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
PTP4A2-204ENST00000475464 PZPP20742 1482 aa16.21■□□□□ 0.19
PTP4A2-204ENST00000475464 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.19
PTP4A2-204ENST00000475464 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
PTP4A2-204ENST00000475464 SHANK2Q9UPX8 1470 aa16.2■□□□□ 0.18
PTP4A2-204ENST00000475464 CPS1P31327 1500 aa16.17■□□□□ 0.18
PTP4A2-204ENST00000475464 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
PTP4A2-204ENST00000475464 NLRP1Q9C000 1473 aa16.16■□□□□ 0.18
PTP4A2-204ENST00000475464 NPHP4O75161 1426 aaPredicted RBP16.16■□□□□ 0.18
PTP4A2-204ENST00000475464 UGGT1Q9NYU2 1555 aa16.14■□□□□ 0.17
PTP4A2-204ENST00000475464 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
PTP4A2-204ENST00000475464 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
PTP4A2-204ENST00000475464 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
PTP4A2-204ENST00000475464 ARHGEF5Q12774 1597 aa16.1■□□□□ 0.17
PTP4A2-204ENST00000475464 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
PTP4A2-204ENST00000475464 MED14O60244 1454 aa16.1■□□□□ 0.17
PTP4A2-204ENST00000475464 POLR1AO95602 1720 aaPredicted RBP16.09■□□□□ 0.17
PTP4A2-204ENST00000475464 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
PTP4A2-204ENST00000475464 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
PTP4A2-204ENST00000475464 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
PTP4A2-204ENST00000475464 TXNDC2Q86VQ3 553 aa16.07■□□□□ 0.16
PTP4A2-204ENST00000475464 ABCC3O15438 1527 aa16.07■□□□□ 0.16
PTP4A2-204ENST00000475464 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
PTP4A2-204ENST00000475464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTP4A2-204ENST00000475464 MED1Q15648 1581 aaPredicted RBP16.05■□□□□ 0.16
PTP4A2-204ENST00000475464 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
PTP4A2-204ENST00000475464 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
PTP4A2-204ENST00000475464 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
PTP4A2-204ENST00000475464 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
PTP4A2-204ENST00000475464 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
PTP4A2-204ENST00000475464 MYOM3Q5VTT5 1437 aa16.03■□□□□ 0.16
PTP4A2-204ENST00000475464 LTKP29376 864 aa16.03■□□□□ 0.16
PTP4A2-204ENST00000475464 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
PTP4A2-204ENST00000475464 APLP2Q06481 763 aa16.02■□□□□ 0.16
PTP4A2-204ENST00000475464 IQGAP1P46940 1657 aa16.02■□□□□ 0.15
PTP4A2-204ENST00000475464 RNF17Q9BXT8 1623 aaKnown RBP16.01■□□□□ 0.15
PTP4A2-204ENST00000475464 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
PTP4A2-204ENST00000475464 KIF15Q9NS87 1388 aa16■□□□□ 0.15
PTP4A2-204ENST00000475464 SCAF11Q99590 1463 aaKnown RBP16■□□□□ 0.15
PTP4A2-204ENST00000475464 DUOX2Q9NRD8 1548 aa15.99■□□□□ 0.15
PTP4A2-204ENST00000475464 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
PTP4A2-204ENST00000475464 KANK1Q14678 1352 aa15.98■□□□□ 0.15
PTP4A2-204ENST00000475464 EIF2AK4Q9P2K8 1649 aaKnown RBP15.97■□□□□ 0.15
PTP4A2-204ENST00000475464 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
PTP4A2-204ENST00000475464 ARHGAP31Q2M1Z3 1444 aa15.96■□□□□ 0.15
PTP4A2-204ENST00000475464 MAP3K1Q13233 1512 aa15.96■□□□□ 0.15
PTP4A2-204ENST00000475464 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
PTP4A2-204ENST00000475464 ABCC5O15440 1437 aa15.95■□□□□ 0.14
PTP4A2-204ENST00000475464 MROH1Q8NDA8 1641 aa15.95■□□□□ 0.14
PTP4A2-204ENST00000475464 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
PTP4A2-204ENST00000475464 CFAP65Q6ZU64 1925 aaKnown RBP15.94■□□□□ 0.14
PTP4A2-204ENST00000475464 IDI1Q13907 227 aa15.94■□□□□ 0.14
PTP4A2-204ENST00000475464 BCANQ96GW7 911 aa15.94■□□□□ 0.14
PTP4A2-204ENST00000475464 TMEM2Q9UHN6 1383 aa15.94■□□□□ 0.14
PTP4A2-204ENST00000475464 ARHGAP23Q9P227 1491 aa15.93■□□□□ 0.14
PTP4A2-204ENST00000475464 SLIT1O75093 1534 aa15.93■□□□□ 0.14
PTP4A2-204ENST00000475464 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
PTP4A2-204ENST00000475464 CEP152O94986 1710 aa15.92■□□□□ 0.14
PTP4A2-204ENST00000475464 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
PTP4A2-204ENST00000475464 PROSER2Q86WR7 435 aaPredicted RBP15.92■□□□□ 0.14
PTP4A2-204ENST00000475464 SLC26A8Q96RN1 970 aa15.92■□□□□ 0.14
PTP4A2-204ENST00000475464 SYNMO15061 1565 aa15.92■□□□□ 0.14
PTP4A2-204ENST00000475464 KCNA6P17658 529 aa15.91■□□□□ 0.14
PTP4A2-204ENST00000475464 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
PTP4A2-204ENST00000475464 RBM33Q96EV2 1170 aaKnown RBP15.9■□□□□ 0.14
PTP4A2-204ENST00000475464 DAPK1P53355 1430 aa15.9■□□□□ 0.14
PTP4A2-204ENST00000475464 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
PTP4A2-204ENST00000475464 TMEM94Q12767 1356 aa15.89■□□□□ 0.13
PTP4A2-204ENST00000475464 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
PTP4A2-204ENST00000475464 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
PTP4A2-204ENST00000475464 SLC52A1Q9NWF4 448 aa15.86■□□□□ 0.13
PTP4A2-204ENST00000475464 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
PTP4A2-204ENST00000475464 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
PTP4A2-204ENST00000475464 EFCAB6Q5THR3 1501 aa15.85■□□□□ 0.13
PTP4A2-204ENST00000475464 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
PTP4A2-204ENST00000475464 PIK3C2BO00750 1634 aa15.85■□□□□ 0.13
PTP4A2-204ENST00000475464 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
PTP4A2-204ENST00000475464 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
PTP4A2-204ENST00000475464 LMTK2Q8IWU2 1503 aa15.82■□□□□ 0.12
PTP4A2-204ENST00000475464 MSH6P52701 1360 aa15.81■□□□□ 0.12
PTP4A2-204ENST00000475464 POTEAQ6S8J7 498 aa15.81■□□□□ 0.12
PTP4A2-204ENST00000475464 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
PTP4A2-204ENST00000475464 NOS1P29475 1434 aa15.8■□□□□ 0.12
PTP4A2-204ENST00000475464 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
PTP4A2-204ENST00000475464 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms