RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 NPHP4O75161 1426 aaPredicted RBP11.08□□□□□ -0.64
LSAMP-204ENST00000475403 SYNMO15061 1565 aa11.07□□□□□ -0.64
LSAMP-204ENST00000475403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
LSAMP-204ENST00000475403 ALKQ9UM73 1620 aa11.07□□□□□ -0.64
LSAMP-204ENST00000475403 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
LSAMP-204ENST00000475403 IQGAP1P46940 1657 aa11.07□□□□□ -0.64
LSAMP-204ENST00000475403 THEMISQ8N1K5 641 aaPredicted RBP11.06□□□□□ -0.64
LSAMP-204ENST00000475403 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
LSAMP-204ENST00000475403 CASKIN1Q8WXD9 1431 aa11.06□□□□□ -0.64
LSAMP-204ENST00000475403 UGGT1Q9NYU2 1555 aa11.06□□□□□ -0.64
LSAMP-204ENST00000475403 KIAA1107Q9UPP5 1409 aa11.05□□□□□ -0.64
LSAMP-204ENST00000475403 DEPDC5O75140 1603 aa11.05□□□□□ -0.64
LSAMP-204ENST00000475403 PZPP20742 1482 aa11.05□□□□□ -0.64
LSAMP-204ENST00000475403 KDM5DQ9BY66 1539 aa11.04□□□□□ -0.64
LSAMP-204ENST00000475403 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
LSAMP-204ENST00000475403 CCNB3Q8WWL7 1395 aa11.04□□□□□ -0.64
LSAMP-204ENST00000475403 NLRP1Q9C000 1473 aa11.04□□□□□ -0.64
LSAMP-204ENST00000475403 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
LSAMP-204ENST00000475403 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
LSAMP-204ENST00000475403 RGS17Q9UGC6 210 aaPredicted RBP11.03□□□□□ -0.64
LSAMP-204ENST00000475403 MED14O60244 1454 aa11.03□□□□□ -0.64
LSAMP-204ENST00000475403 FYCO1Q9BQS8 1478 aa11.02□□□□□ -0.65
LSAMP-204ENST00000475403 WASHC2CQ9Y4E1 1318 aa11.02□□□□□ -0.65
LSAMP-204ENST00000475403 KIF3BO15066 747 aa11.01□□□□□ -0.65
LSAMP-204ENST00000475403 STRCP1A6NGW2 1772 aa11□□□□□ -0.65
LSAMP-204ENST00000475403 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
LSAMP-204ENST00000475403 SETD1AO15047 1707 aaKnown RBP11□□□□□ -0.65
LSAMP-204ENST00000475403 MIA2Q96PC5 1412 aa11□□□□□ -0.65
LSAMP-204ENST00000475403 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
LSAMP-204ENST00000475403 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
LSAMP-204ENST00000475403 MTUS2Q5JR59 1369 aa10.97□□□□□ -0.65
LSAMP-204ENST00000475403 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
LSAMP-204ENST00000475403 ZNF644Q9H582 1327 aaPredicted RBP10.94□□□□□ -0.66
LSAMP-204ENST00000475403 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
LSAMP-204ENST00000475403 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
LSAMP-204ENST00000475403 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
LSAMP-204ENST00000475403 TIAM1Q13009 1591 aa10.93□□□□□ -0.66
LSAMP-204ENST00000475403 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
LSAMP-204ENST00000475403 FAM135BQ49AJ0 1406 aa10.92□□□□□ -0.66
LSAMP-204ENST00000475403 ROBO1Q9Y6N7 1651 aa10.92□□□□□ -0.66
LSAMP-204ENST00000475403 XIRP1Q702N8 1843 aaKnown RBP10.91□□□□□ -0.66
LSAMP-204ENST00000475403 UBR1Q8IWV7 1749 aa10.9□□□□□ -0.66
LSAMP-204ENST00000475403 ERVK-7P63135 1459 aa10.9□□□□□ -0.66
LSAMP-204ENST00000475403 LRRC9Q6ZRR7 1453 aa10.9□□□□□ -0.66
LSAMP-204ENST00000475403 EID1Q9Y6B2 187 aa10.9□□□□□ -0.66
LSAMP-204ENST00000475403 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
LSAMP-204ENST00000475403 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
LSAMP-204ENST00000475403 TXNDC2Q86VQ3 553 aa10.89□□□□□ -0.67
LSAMP-204ENST00000475403 ABCC3O15438 1527 aa10.89□□□□□ -0.67
LSAMP-204ENST00000475403 PHLPP1O60346 1717 aa10.88□□□□□ -0.67
LSAMP-204ENST00000475403 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
LSAMP-204ENST00000475403 TMEM94Q12767 1356 aa10.88□□□□□ -0.67
LSAMP-204ENST00000475403 CAMSAP2Q08AD1 1489 aa10.87□□□□□ -0.67
LSAMP-204ENST00000475403 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
LSAMP-204ENST00000475403 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
LSAMP-204ENST00000475403 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
LSAMP-204ENST00000475403 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
LSAMP-204ENST00000475403 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
LSAMP-204ENST00000475403 JCADQ9P266 1359 aa10.87□□□□□ -0.67
LSAMP-204ENST00000475403 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
LSAMP-204ENST00000475403 SLIT1O75093 1534 aa10.85□□□□□ -0.67
LSAMP-204ENST00000475403 CEP152O94986 1710 aa10.85□□□□□ -0.67
LSAMP-204ENST00000475403 LTKP29376 864 aa10.85□□□□□ -0.67
LSAMP-204ENST00000475403 ZNF772Q68DY9 489 aaPredicted RBP10.85□□□□□ -0.67
LSAMP-204ENST00000475403 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
LSAMP-204ENST00000475403 MSH6P52701 1360 aa10.85□□□□□ -0.67
LSAMP-204ENST00000475403 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
LSAMP-204ENST00000475403 NCOA2Q15596 1464 aa10.84□□□□□ -0.67
LSAMP-204ENST00000475403 ARHGAP23Q9P227 1491 aa10.84□□□□□ -0.67
LSAMP-204ENST00000475403 EIF2AK4Q9P2K8 1649 aaKnown RBP10.84□□□□□ -0.67
LSAMP-204ENST00000475403 RBM33Q96EV2 1170 aaKnown RBP10.83□□□□□ -0.68
LSAMP-204ENST00000475403 MAP3K1Q13233 1512 aa10.83□□□□□ -0.68
LSAMP-204ENST00000475403 ARHGEF5Q12774 1597 aa10.82□□□□□ -0.68
LSAMP-204ENST00000475403 KCNA6P17658 529 aa10.82□□□□□ -0.68
LSAMP-204ENST00000475403 BCANQ96GW7 911 aa10.82□□□□□ -0.68
LSAMP-204ENST00000475403 NKTRP30414 1462 aaKnown RBP10.81□□□□□ -0.68
LSAMP-204ENST00000475403 PRDM15P57071 1507 aaPredicted RBP10.81□□□□□ -0.68
LSAMP-204ENST00000475403 SPATA31A6Q5VVP1 1343 aa10.81□□□□□ -0.68
LSAMP-204ENST00000475403 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
LSAMP-204ENST00000475403 TMEM2Q9UHN6 1383 aa10.8□□□□□ -0.68
LSAMP-204ENST00000475403 RXRBP28702 533 aa10.8□□□□□ -0.68
LSAMP-204ENST00000475403 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
LSAMP-204ENST00000475403 SLC26A8Q96RN1 970 aa10.79□□□□□ -0.68
LSAMP-204ENST00000475403 LRP6O75581 1613 aa10.79□□□□□ -0.68
LSAMP-204ENST00000475403 COL16A1Q07092 1604 aaPredicted RBP10.79□□□□□ -0.68
LSAMP-204ENST00000475403 EFCAB6Q5THR3 1501 aa10.79□□□□□ -0.68
LSAMP-204ENST00000475403 FGD6Q6ZV73 1430 aa10.78□□□□□ -0.68
LSAMP-204ENST00000475403 MROH1Q8NDA8 1641 aa10.78□□□□□ -0.68
LSAMP-204ENST00000475403 MYT1Q01538 1121 aa10.78□□□□□ -0.68
LSAMP-204ENST00000475403 C14orf37Q86TY3 774 aa10.78□□□□□ -0.68
LSAMP-204ENST00000475403 NWD1Q149M9 1564 aa10.77□□□□□ -0.68
LSAMP-204ENST00000475403 SRCAPQ6ZRS2 3230 aa10.77□□□□□ -0.68
LSAMP-204ENST00000475403 MAST1Q9Y2H9 1570 aa10.77□□□□□ -0.69
LSAMP-204ENST00000475403 FOXD1Q16676 465 aa10.76□□□□□ -0.69
LSAMP-204ENST00000475403 KDM5AP29375 1690 aaKnown RBP10.76□□□□□ -0.69
LSAMP-204ENST00000475403 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
LSAMP-204ENST00000475403 CDK12Q9NYV4 1490 aaPredicted RBP10.75□□□□□ -0.69
LSAMP-204ENST00000475403 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
LSAMP-204ENST00000475403 NUTM2BA6NNL0 878 aaPredicted RBP10.75□□□□□ -0.69
LSAMP-204ENST00000475403 NUTM2EB1AL46 878 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms