RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
RPSA-205ENST00000475346 LHX6Q9UPM6 363 aa9.37□□□□□ -0.91
RPSA-205ENST00000475346 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
RPSA-205ENST00000475346 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
RPSA-205ENST00000475346 FAM117AQ9C073 453 aa9.33□□□□□ -0.92
RPSA-205ENST00000475346 C1orf115Q9H7X2 142 aa9.33□□□□□ -0.92
RPSA-205ENST00000475346 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
RPSA-205ENST00000475346 PCDH10Q9P2E7 1040 aa9.32□□□□□ -0.92
RPSA-205ENST00000475346 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
RPSA-205ENST00000475346 DPYSL4O14531 572 aa9.31□□□□□ -0.92
RPSA-205ENST00000475346 EVI5O60447 810 aa9.3□□□□□ -0.92
RPSA-205ENST00000475346 HRCP23327 699 aa9.3□□□□□ -0.92
RPSA-205ENST00000475346 AXIN2Q9Y2T1 843 aa9.28□□□□□ -0.92
RPSA-205ENST00000475346 APBB1O00213 710 aa9.27□□□□□ -0.93
RPSA-205ENST00000475346 ZNF687Q8N1G0 1237 aa9.27□□□□□ -0.93
RPSA-205ENST00000475346 GPR37O15354 613 aa9.26□□□□□ -0.93
RPSA-205ENST00000475346 ZNF454Q8N9F8 522 aa9.26□□□□□ -0.93
RPSA-205ENST00000475346 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
RPSA-205ENST00000475346 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
RPSA-205ENST00000475346 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
RPSA-205ENST00000475346 PLEKHG3A1L390 1219 aa9.25□□□□□ -0.93
RPSA-205ENST00000475346 SPDYE16A6NNV3 312 aaPredicted RBP9.25□□□□□ -0.93
RPSA-205ENST00000475346 PDIA6Q15084 440 aa9.25□□□□□ -0.93
RPSA-205ENST00000475346 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
RPSA-205ENST00000475346 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
RPSA-205ENST00000475346 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
RPSA-205ENST00000475346 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
RPSA-205ENST00000475346 CCDC102AQ96A19 550 aa9.24□□□□□ -0.93
RPSA-205ENST00000475346 PSDA5PKW4 1024 aaPredicted RBP9.22□□□□□ -0.93
RPSA-205ENST00000475346 FLIIQ13045 1269 aa9.22□□□□□ -0.93
RPSA-205ENST00000475346 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
RPSA-205ENST00000475346 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
RPSA-205ENST00000475346 PSEN2P49810 448 aa9.2□□□□□ -0.94
RPSA-205ENST00000475346 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
RPSA-205ENST00000475346 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
RPSA-205ENST00000475346 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
RPSA-205ENST00000475346 POTEEQ6S8J3 1075 aa9.19□□□□□ -0.94
RPSA-205ENST00000475346 DDX12PQ92771 950 aa9.19□□□□□ -0.94
RPSA-205ENST00000475346 KCNK17Q96T54 332 aa9.19□□□□□ -0.94
RPSA-205ENST00000475346 IRF6O14896 467 aa9.18□□□□□ -0.94
RPSA-205ENST00000475346 AMHR2Q16671 573 aa9.18□□□□□ -0.94
RPSA-205ENST00000475346 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
RPSA-205ENST00000475346 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
RPSA-205ENST00000475346 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
RPSA-205ENST00000475346 FOSBP53539 338 aa9.17□□□□□ -0.94
RPSA-205ENST00000475346 KCNH8Q96L42 1107 aa9.17□□□□□ -0.94
RPSA-205ENST00000475346 ARHGAP33O14559 1287 aa9.16□□□□□ -0.94
RPSA-205ENST00000475346 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
RPSA-205ENST00000475346 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
RPSA-205ENST00000475346 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
RPSA-205ENST00000475346 DMRTA1Q5VZB9 504 aa9.15□□□□□ -0.94
RPSA-205ENST00000475346 CCDC82Q8N4S0 544 aa9.15□□□□□ -0.94
RPSA-205ENST00000475346 ZDHHC16Q969W1 377 aa9.15□□□□□ -0.94
RPSA-205ENST00000475346 RBM33Q96EV2 1170 aaKnown RBP9.15□□□□□ -0.94
RPSA-205ENST00000475346 JPH4Q96JJ6 628 aa9.15□□□□□ -0.94
RPSA-205ENST00000475346 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
RPSA-205ENST00000475346 PBX2P40425 430 aa9.14□□□□□ -0.95
RPSA-205ENST00000475346 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
RPSA-205ENST00000475346 PCDHGA10Q9Y5H3 936 aa9.14□□□□□ -0.95
RPSA-205ENST00000475346 GNPATO15228 680 aa9.13□□□□□ -0.95
RPSA-205ENST00000475346 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
RPSA-205ENST00000475346 FECHP22830 423 aa9.12□□□□□ -0.95
RPSA-205ENST00000475346 PTPREP23469 700 aa9.12□□□□□ -0.95
RPSA-205ENST00000475346 TRAK2O60296 914 aa9.11□□□□□ -0.95
RPSA-205ENST00000475346 PHF14O94880 888 aa9.11□□□□□ -0.95
RPSA-205ENST00000475346 TYW1BQ6NUM6 668 aa9.11□□□□□ -0.95
RPSA-205ENST00000475346 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
RPSA-205ENST00000475346 A6NJR5 290 aa9.1□□□□□ -0.95
RPSA-205ENST00000475346 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
RPSA-205ENST00000475346 BCL2L12Q9HB09 334 aa9.1□□□□□ -0.95
RPSA-205ENST00000475346 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
RPSA-205ENST00000475346 FCHSD2O94868 740 aa9.09□□□□□ -0.95
RPSA-205ENST00000475346 HIC1Q14526 733 aa9.09□□□□□ -0.95
RPSA-205ENST00000475346 OSBPP22059 807 aa9.08□□□□□ -0.96
RPSA-205ENST00000475346 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
RPSA-205ENST00000475346 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
RPSA-205ENST00000475346 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
RPSA-205ENST00000475346 MAP3K7O43318 606 aa9.07□□□□□ -0.96
RPSA-205ENST00000475346 MS4A1P11836 297 aa9.07□□□□□ -0.96
RPSA-205ENST00000475346 FBXW7Q969H0 707 aa9.07□□□□□ -0.96
RPSA-205ENST00000475346 EPAS1Q99814 870 aa9.07□□□□□ -0.96
RPSA-205ENST00000475346 CCDC9Q9Y3X0 531 aaKnown RBP9.07□□□□□ -0.96
RPSA-205ENST00000475346 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
RPSA-205ENST00000475346 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
RPSA-205ENST00000475346 PTGER2P43116 358 aa9.05□□□□□ -0.96
RPSA-205ENST00000475346 MCM6Q14566 821 aa9.05□□□□□ -0.96
RPSA-205ENST00000475346 COL9A1P20849 921 aa9.04□□□□□ -0.96
RPSA-205ENST00000475346 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
RPSA-205ENST00000475346 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
RPSA-205ENST00000475346 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
RPSA-205ENST00000475346 ZNF777Q9ULD5 760 aaPredicted RBP9.03□□□□□ -0.96
RPSA-205ENST00000475346 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
RPSA-205ENST00000475346 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
RPSA-205ENST00000475346 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.97
RPSA-205ENST00000475346 ATP1B4Q9UN42 357 aaPredicted RBP9.02□□□□□ -0.97
RPSA-205ENST00000475346 VPS9D1Q9Y2B5 631 aa9.02□□□□□ -0.97
RPSA-205ENST00000475346 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
RPSA-205ENST00000475346 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
RPSA-205ENST00000475346 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
RPSA-205ENST00000475346 PPP1R3GB7ZBB8 358 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms