RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 ESF1Q9H501 851 aaKnown RBP34.68■■■■□ 3.14
YIF1A-206ENST00000474986 RIMS1Q86UR5 1692 aaKnown RBP34.66■■■■□ 3.14
YIF1A-206ENST00000474986 FAM135AQ9P2D6 1515 aa34.65■■■■□ 3.14
YIF1A-206ENST00000474986 RNF17Q9BXT8 1623 aaKnown RBP34.63■■■■□ 3.13
YIF1A-206ENST00000474986 ANKRD50Q9ULJ7 1429 aa34.61■■■■□ 3.13
YIF1A-206ENST00000474986 KDM5DQ9BY66 1539 aa34.55■■■■□ 3.12
YIF1A-206ENST00000474986 MROH2AA6NES4 1674 aa34.54■■■■□ 3.12
YIF1A-206ENST00000474986 WASHC2CQ9Y4E1 1318 aa34.52■■■■□ 3.12
YIF1A-206ENST00000474986 MROH1Q8NDA8 1641 aa34.52■■■■□ 3.12
YIF1A-206ENST00000474986 ZMYM3Q14202 1370 aa34.51■■■■□ 3.12
YIF1A-206ENST00000474986 PRDM15P57071 1507 aaPredicted RBP34.51■■■■□ 3.12
YIF1A-206ENST00000474986 DEPDC5O75140 1603 aa34.5■■■■□ 3.11
YIF1A-206ENST00000474986 CLTCQ00610 1675 aaKnown RBP34.48■■■■□ 3.11
YIF1A-206ENST00000474986 CEBPAP49715 358 aaPredicted RBP34.46■■■■□ 3.11
YIF1A-206ENST00000474986 KANK1Q14678 1352 aa34.46■■■■□ 3.11
YIF1A-206ENST00000474986 HFM1A2PYH4 1435 aa34.46■■■■□ 3.11
YIF1A-206ENST00000474986 ABCC3O15438 1527 aa34.45■■■■□ 3.11
YIF1A-206ENST00000474986 NAIPQ13075 1403 aa34.45■■■■□ 3.11
YIF1A-206ENST00000474986 ZC3H13Q5T200 1668 aaKnown RBP34.44■■■■□ 3.1
YIF1A-206ENST00000474986 C3P01024 1663 aa34.43■■■■□ 3.1
YIF1A-206ENST00000474986 PLPPR3Q6T4P5 718 aa34.41■■■■□ 3.1
YIF1A-206ENST00000474986 NPATQ14207 1427 aa34.4■■■■□ 3.1
YIF1A-206ENST00000474986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.4■■■■□ 3.1
YIF1A-206ENST00000474986 VWDEQ8N2E2 1590 aa34.4■■■■□ 3.1
YIF1A-206ENST00000474986 GCC2Q8IWJ2 1684 aa34.37■■■■□ 3.09
YIF1A-206ENST00000474986 LMTK2Q8IWU2 1503 aa34.36■■■■□ 3.09
YIF1A-206ENST00000474986 PZPP20742 1482 aa34.36■■■■□ 3.09
YIF1A-206ENST00000474986 UNC13BO14795 1591 aa34.35■■■■□ 3.09
YIF1A-206ENST00000474986 ARHGAP31Q2M1Z3 1444 aa34.32■■■■□ 3.08
YIF1A-206ENST00000474986 SETD1BQ9UPS6 1966 aaKnown RBP34.29■■■■□ 3.08
YIF1A-206ENST00000474986 CEP152O94986 1710 aa34.29■■■■□ 3.08
YIF1A-206ENST00000474986 CAMSAP1Q5T5Y3 1602 aa34.28■■■■□ 3.08
YIF1A-206ENST00000474986 NUP155O75694 1391 aa34.25■■■■□ 3.07
YIF1A-206ENST00000474986 UHRF1BP1Q6BDS2 1440 aa34.23■■■■□ 3.07
YIF1A-206ENST00000474986 LMTK3Q96Q04 1460 aa34.23■■■■□ 3.07
YIF1A-206ENST00000474986 FBXO31Q5XUX0 539 aaPredicted RBP34.22■■■■□ 3.07
YIF1A-206ENST00000474986 PREX1Q8TCU6 1659 aa34.22■■■■□ 3.07
YIF1A-206ENST00000474986 EFCAB6Q5THR3 1501 aa34.21■■■■□ 3.07
YIF1A-206ENST00000474986 IQGAP3Q86VI3 1631 aa34.21■■■■□ 3.07
YIF1A-206ENST00000474986 TNRQ92752 1358 aa34.2■■■■□ 3.07
YIF1A-206ENST00000474986 ACIN1Q9UKV3 1341 aaKnown RBP34.19■■■■□ 3.06
YIF1A-206ENST00000474986 ERVK-7P63135 1459 aa34.19■■■■□ 3.06
YIF1A-206ENST00000474986 SPATA31D1Q6ZQQ2 1576 aa34.19■■■■□ 3.06
YIF1A-206ENST00000474986 TET3O43151 1660 aa34.17■■■■□ 3.06
YIF1A-206ENST00000474986 RPRD2Q5VT52 1461 aaKnown RBP34.17■■■■□ 3.06
YIF1A-206ENST00000474986 SETD5Q9C0A6 1442 aa34.17■■■■□ 3.06
YIF1A-206ENST00000474986 NLRP1Q9C000 1473 aa34.11■■■■□ 3.05
YIF1A-206ENST00000474986 MYO3AQ8NEV4 1616 aa34.1■■■■□ 3.05
YIF1A-206ENST00000474986 TRIM52Q96A61 297 aa34.08■■■■□ 3.05
YIF1A-206ENST00000474986 NOS1P29475 1434 aa34.07■■■■□ 3.04
YIF1A-206ENST00000474986 A2ML1A8K2U0 1454 aa34.07■■■■□ 3.04
YIF1A-206ENST00000474986 CEP170BQ9Y4F5 1589 aaPredicted RBP34.05■■■■□ 3.04
YIF1A-206ENST00000474986 ZNF142P52746 1687 aaPredicted RBP34.05■■■■□ 3.04
YIF1A-206ENST00000474986 RAB3GAP2Q9H2M9 1393 aa34.04■■■■□ 3.04
YIF1A-206ENST00000474986 HRCP23327 699 aa34.02■■■■□ 3.04
YIF1A-206ENST00000474986 HSPA2P54652 639 aa34.01■■■■□ 3.03
YIF1A-206ENST00000474986 E9PCH4 1651 aa34■■■■□ 3.03
YIF1A-206ENST00000474986 TRIM26Q12899 539 aaPredicted RBP33.99■■■■□ 3.03
YIF1A-206ENST00000474986 CFAP65Q6ZU64 1925 aaKnown RBP33.97■■■■□ 3.03
YIF1A-206ENST00000474986 SLC4A1APQ9BWU0 796 aaKnown RBP33.97■■■■□ 3.03
YIF1A-206ENST00000474986 SLC52A1Q9NWF4 448 aa33.97■■■■□ 3.03
YIF1A-206ENST00000474986 SYNMO15061 1565 aa33.95■■■■□ 3.03
YIF1A-206ENST00000474986 UGGT1Q9NYU2 1555 aa33.93■■■■□ 3.02
YIF1A-206ENST00000474986 PTPRTO14522 1441 aa33.91■■■■□ 3.02
YIF1A-206ENST00000474986 PKD2Q13563 968 aa33.91■■■■□ 3.02
YIF1A-206ENST00000474986 THEMISQ8N1K5 641 aaPredicted RBP33.91■■■■□ 3.02
YIF1A-206ENST00000474986 PLA2R1Q13018 1463 aa33.9■■■■□ 3.02
YIF1A-206ENST00000474986 IDI1Q13907 227 aa33.9■■■■□ 3.02
YIF1A-206ENST00000474986 MPHOSPH9Q99550 1183 aa33.89■■■■□ 3.02
YIF1A-206ENST00000474986 PIK3C2BO00750 1634 aa33.82■■■■□ 3.01
YIF1A-206ENST00000474986 KDM5AP29375 1690 aaKnown RBP33.82■■■■□ 3
YIF1A-206ENST00000474986 SPHKAPQ2M3C7 1700 aa33.81■■■■□ 3
YIF1A-206ENST00000474986 UBR1Q8IWV7 1749 aa33.8■■■■□ 3
YIF1A-206ENST00000474986 STAG3Q9UJ98 1225 aa33.8■■■■□ 3
YIF1A-206ENST00000474986 TRPM2O94759 1503 aa33.79■■■■□ 3
YIF1A-206ENST00000474986 ADGRB3O60242 1522 aa33.79■■■■□ 3
YIF1A-206ENST00000474986 ILDR1Q86SU0 546 aaPredicted RBP33.77■■■■□ 3
YIF1A-206ENST00000474986 DMRT2Q9Y5R5 561 aa33.77■■■■□ 3
YIF1A-206ENST00000474986 STRCQ7RTU9 1775 aa33.75■■■□□ 2.99
YIF1A-206ENST00000474986 ARHGAP23Q9P227 1491 aa33.74■■■□□ 2.99
YIF1A-206ENST00000474986 SLIT1O75093 1534 aa33.74■■■□□ 2.99
YIF1A-206ENST00000474986 ANKLE2Q86XL3 938 aa33.73■■■□□ 2.99
YIF1A-206ENST00000474986 TMEM2Q9UHN6 1383 aa33.72■■■□□ 2.99
YIF1A-206ENST00000474986 FOXD1Q16676 465 aa33.71■■■□□ 2.99
YIF1A-206ENST00000474986 NCKAP5LQ9HCH0 1330 aa33.71■■■□□ 2.99
YIF1A-206ENST00000474986 TMEM131LA2VDJ0 1609 aa33.68■■■□□ 2.98
YIF1A-206ENST00000474986 CLTCL1P53675 1640 aa33.65■■■□□ 2.98
YIF1A-206ENST00000474986 MED14O60244 1454 aa33.64■■■□□ 2.98
YIF1A-206ENST00000474986 CHGAP10645 457 aaKnown RBP33.64■■■□□ 2.98
YIF1A-206ENST00000474986 EID1Q9Y6B2 187 aa33.64■■■□□ 2.98
YIF1A-206ENST00000474986 SCAF11Q99590 1463 aaKnown RBP33.63■■■□□ 2.97
YIF1A-206ENST00000474986 CCDC144AA2RUR9 1427 aa33.62■■■□□ 2.97
YIF1A-206ENST00000474986 POLR1AO95602 1720 aaPredicted RBP33.62■■■□□ 2.97
YIF1A-206ENST00000474986 NEURL4Q96JN8 1562 aa33.61■■■□□ 2.97
YIF1A-206ENST00000474986 TXNDC2Q86VQ3 553 aa33.61■■■□□ 2.97
YIF1A-206ENST00000474986 HDGFP51858 240 aaKnown RBP33.6■■■□□ 2.97
YIF1A-206ENST00000474986 LTKP29376 864 aa33.59■■■□□ 2.97
YIF1A-206ENST00000474986 ZFYVE9O95405 1425 aa33.59■■■□□ 2.97
YIF1A-206ENST00000474986 NPHP4O75161 1426 aaPredicted RBP33.57■■■□□ 2.96
YIF1A-206ENST00000474986 RIMS2Q9UQ26 1411 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms