RNA–Protein interactions for RNA: ENST00000474802.1

PREB-209, Transcript of prolactin regulatory element binding, humanhuman

TSL 5

Gene PREB, Length 1,283 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-209ENST00000474802 RNF17Q9BXT8 1623 aaKnown RBP29.67■■■□□ 2.34
PREB-209ENST00000474802 MROH2AA6NES4 1674 aa29.67■■■□□ 2.34
PREB-209ENST00000474802 FAM135AQ9P2D6 1515 aa29.65■■■□□ 2.34
PREB-209ENST00000474802 C3P01024 1663 aa29.64■■■□□ 2.34
PREB-209ENST00000474802 CLTCQ00610 1675 aaKnown RBP29.64■■■□□ 2.34
PREB-209ENST00000474802 ROCK1Q13464 1354 aa29.63■■■□□ 2.33
PREB-209ENST00000474802 CEBPAP49715 358 aaPredicted RBP29.62■■■□□ 2.33
PREB-209ENST00000474802 PLPPR3Q6T4P5 718 aa29.62■■■□□ 2.33
PREB-209ENST00000474802 ZMYM3Q14202 1370 aa29.6■■■□□ 2.33
PREB-209ENST00000474802 KDM5DQ9BY66 1539 aa29.6■■■□□ 2.33
PREB-209ENST00000474802 MROH1Q8NDA8 1641 aa29.6■■■□□ 2.33
PREB-209ENST00000474802 ITGAEP38570 1179 aa29.59■■■□□ 2.33
PREB-209ENST00000474802 ANKRD50Q9ULJ7 1429 aa29.55■■■□□ 2.32
PREB-209ENST00000474802 DEPDC5O75140 1603 aa29.55■■■□□ 2.32
PREB-209ENST00000474802 WASHC2CQ9Y4E1 1318 aa29.54■■■□□ 2.32
PREB-209ENST00000474802 PRDM15P57071 1507 aaPredicted RBP29.54■■■□□ 2.32
PREB-209ENST00000474802 ZC3H13Q5T200 1668 aaKnown RBP29.53■■■□□ 2.32
PREB-209ENST00000474802 ABCC3O15438 1527 aa29.51■■■□□ 2.32
PREB-209ENST00000474802 NPATQ14207 1427 aa29.5■■■□□ 2.31
PREB-209ENST00000474802 LMTK3Q96Q04 1460 aa29.48■■■□□ 2.31
PREB-209ENST00000474802 SETD1BQ9UPS6 1966 aaKnown RBP29.48■■■□□ 2.31
PREB-209ENST00000474802 PREX1Q8TCU6 1659 aa29.47■■■□□ 2.31
PREB-209ENST00000474802 CEP152O94986 1710 aa29.45■■■□□ 2.31
PREB-209ENST00000474802 PZPP20742 1482 aa29.45■■■□□ 2.31
PREB-209ENST00000474802 VWDEQ8N2E2 1590 aa29.44■■■□□ 2.3
PREB-209ENST00000474802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.43■■■□□ 2.33e-6■■□□□ 11.4
PREB-209ENST00000474802 KANK1Q14678 1352 aa29.42■■■□□ 2.3
PREB-209ENST00000474802 UHRF1BP1Q6BDS2 1440 aa29.41■■■□□ 2.3
PREB-209ENST00000474802 CAMSAP1Q5T5Y3 1602 aa29.41■■■□□ 2.3
PREB-209ENST00000474802 LMTK2Q8IWU2 1503 aa29.4■■■□□ 2.3
PREB-209ENST00000474802 UNC13BO14795 1591 aa29.39■■■□□ 2.3
PREB-209ENST00000474802 NAIPQ13075 1403 aa29.37■■■□□ 2.29
PREB-209ENST00000474802 GCC2Q8IWJ2 1684 aa29.36■■■□□ 2.29
PREB-209ENST00000474802 ARHGAP31Q2M1Z3 1444 aa29.36■■■□□ 2.29
PREB-209ENST00000474802 FBXO31Q5XUX0 539 aaPredicted RBP29.35■■■□□ 2.29
PREB-209ENST00000474802 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
PREB-209ENST00000474802 MYO3AQ8NEV4 1616 aa29.33■■■□□ 2.29
PREB-209ENST00000474802 SPATA31D1Q6ZQQ2 1576 aa29.31■■■□□ 2.28
PREB-209ENST00000474802 TNRQ92752 1358 aa29.31■■■□□ 2.28
PREB-209ENST00000474802 HSPA2P54652 639 aa29.3■■■□□ 2.28
PREB-209ENST00000474802 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
PREB-209ENST00000474802 ZNF142P52746 1687 aaPredicted RBP29.28■■■□□ 2.28
PREB-209ENST00000474802 EFCAB6Q5THR3 1501 aa29.28■■■□□ 2.28
PREB-209ENST00000474802 IQGAP3Q86VI3 1631 aa29.27■■■□□ 2.28
PREB-209ENST00000474802 TET3O43151 1660 aa29.25■■■□□ 2.27
PREB-209ENST00000474802 CEP170BQ9Y4F5 1589 aaPredicted RBP29.25■■■□□ 2.27
PREB-209ENST00000474802 NUP155O75694 1391 aa29.23■■■□□ 2.27
PREB-209ENST00000474802 A2ML1A8K2U0 1454 aa29.23■■■□□ 2.27
PREB-209ENST00000474802 NLRP1Q9C000 1473 aa29.22■■■□□ 2.27
PREB-209ENST00000474802 CFAP65Q6ZU64 1925 aaKnown RBP29.22■■■□□ 2.27
PREB-209ENST00000474802 RPRD2Q5VT52 1461 aaKnown RBP29.21■■■□□ 2.27
PREB-209ENST00000474802 NOS1P29475 1434 aa29.16■■■□□ 2.26
PREB-209ENST00000474802 E9PCH4 1651 aa29.14■■■□□ 2.26
PREB-209ENST00000474802 STRCQ7RTU9 1775 aa29.12■■■□□ 2.25
PREB-209ENST00000474802 SYNMO15061 1565 aa29.12■■■□□ 2.25
PREB-209ENST00000474802 PLA2R1Q13018 1463 aa29.1■■■□□ 2.25
PREB-209ENST00000474802 UGGT1Q9NYU2 1555 aa29.1■■■□□ 2.25
PREB-209ENST00000474802 SETD5Q9C0A6 1442 aa29.09■■■□□ 2.25
PREB-209ENST00000474802 TRIM52Q96A61 297 aa29.06■■■□□ 2.24
PREB-209ENST00000474802 UBR1Q8IWV7 1749 aa29.04■■■□□ 2.24
PREB-209ENST00000474802 THEMISQ8N1K5 641 aaPredicted RBP29.04■■■□□ 2.24
PREB-209ENST00000474802 PIK3C2BO00750 1634 aa29.03■■■□□ 2.24
PREB-209ENST00000474802 IDI1Q13907 227 aa29.02■■■□□ 2.24
PREB-209ENST00000474802 SLC52A1Q9NWF4 448 aa29.02■■■□□ 2.24
PREB-209ENST00000474802 ACIN1Q9UKV3 1341 aaKnown RBP29■■■□□ 2.23
PREB-209ENST00000474802 KDM5AP29375 1690 aaKnown RBP29■■■□□ 2.23
PREB-209ENST00000474802 PKD2Q13563 968 aa28.99■■■□□ 2.23
PREB-209ENST00000474802 DMRT2Q9Y5R5 561 aa28.99■■■□□ 2.23
PREB-209ENST00000474802 RAB3GAP2Q9H2M9 1393 aa28.99■■■□□ 2.23
PREB-209ENST00000474802 NCKAP5LQ9HCH0 1330 aa28.97■■■□□ 2.23
PREB-209ENST00000474802 PTPRTO14522 1441 aa28.97■■■□□ 2.23
PREB-209ENST00000474802 SLC4A1APQ9BWU0 796 aaKnown RBP28.96■■■□□ 2.23
PREB-209ENST00000474802 SPHKAPQ2M3C7 1700 aa28.96■■■□□ 2.23
PREB-209ENST00000474802 ADGRB3O60242 1522 aa28.94■■■□□ 2.22
PREB-209ENST00000474802 POLR1AO95602 1720 aaPredicted RBP28.94■■■□□ 2.22
PREB-209ENST00000474802 SLIT1O75093 1534 aa28.93■■■□□ 2.22
PREB-209ENST00000474802 ARHGAP23Q9P227 1491 aa28.92■■■□□ 2.22
PREB-209ENST00000474802 ANKLE2Q86XL3 938 aa28.92■■■□□ 2.22
PREB-209ENST00000474802 STAG3Q9UJ98 1225 aa28.92■■■□□ 2.22
PREB-209ENST00000474802 NEURL4Q96JN8 1562 aa28.91■■■□□ 2.22
PREB-209ENST00000474802 HRCP23327 699 aa28.89■■■□□ 2.22
PREB-209ENST00000474802 TRPM2O94759 1503 aa28.89■■■□□ 2.21
PREB-209ENST00000474802 TMEM131LA2VDJ0 1609 aa28.88■■■□□ 2.21
PREB-209ENST00000474802 MPHOSPH9Q99550 1183 aa28.88■■■□□ 2.21
PREB-209ENST00000474802 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
PREB-209ENST00000474802 MED14O60244 1454 aa28.87■■■□□ 2.21
PREB-209ENST00000474802 SCAF11Q99590 1463 aaKnown RBP28.84■■■□□ 2.21
PREB-209ENST00000474802 MYO5BQ9ULV0 1848 aa28.83■■■□□ 2.21
PREB-209ENST00000474802 NPHP4O75161 1426 aaPredicted RBP28.82■■■□□ 2.2
PREB-209ENST00000474802 CLTCL1P53675 1640 aa28.82■■■□□ 2.2
PREB-209ENST00000474802 LTKP29376 864 aa28.81■■■□□ 2.2
PREB-209ENST00000474802 TXNDC2Q86VQ3 553 aa28.8■■■□□ 2.2
PREB-209ENST00000474802 FOXD1Q16676 465 aa28.79■■■□□ 2.2
PREB-209ENST00000474802 EID1Q9Y6B2 187 aa28.79■■■□□ 2.2
PREB-209ENST00000474802 IQGAP1P46940 1657 aa28.78■■■□□ 2.2
PREB-209ENST00000474802 CHGAP10645 457 aaKnown RBP28.78■■■□□ 2.2
PREB-209ENST00000474802 ZFYVE9O95405 1425 aa28.77■■■□□ 2.2
PREB-209ENST00000474802 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
PREB-209ENST00000474802 RIMS2Q9UQ26 1411 aa28.74■■■□□ 2.19
PREB-209ENST00000474802 KIF1BO60333 1816 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms