RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 KIF3BO15066 747 aa20.18■□□□□ 0.82
BRAT1-205ENST00000473879 ZMYM3Q14202 1370 aa20.18■□□□□ 0.82
BRAT1-205ENST00000473879 NCOA1Q15788 1441 aa20.17■□□□□ 0.82
BRAT1-205ENST00000473879 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
BRAT1-205ENST00000473879 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
BRAT1-205ENST00000473879 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
BRAT1-205ENST00000473879 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
BRAT1-205ENST00000473879 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.81
BRAT1-205ENST00000473879 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
BRAT1-205ENST00000473879 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
BRAT1-205ENST00000473879 NPATQ14207 1427 aa20.12■□□□□ 0.81
BRAT1-205ENST00000473879 UHRF1BP1Q6BDS2 1440 aa20.12■□□□□ 0.81
BRAT1-205ENST00000473879 ROCK1Q13464 1354 aa20.12■□□□□ 0.81
BRAT1-205ENST00000473879 HSPA2P54652 639 aa20.12■□□□□ 0.81
BRAT1-205ENST00000473879 KIF15Q9NS87 1388 aa20.11■□□□□ 0.81
BRAT1-205ENST00000473879 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
BRAT1-205ENST00000473879 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
BRAT1-205ENST00000473879 ZC3H13Q5T200 1668 aaKnown RBP20.08■□□□□ 0.81
BRAT1-205ENST00000473879 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.81
BRAT1-205ENST00000473879 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
BRAT1-205ENST00000473879 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.8
BRAT1-205ENST00000473879 WASHC2CQ9Y4E1 1318 aa20.07■□□□□ 0.8
BRAT1-205ENST00000473879 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
BRAT1-205ENST00000473879 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
BRAT1-205ENST00000473879 MYO3AQ8NEV4 1616 aa20.06■□□□□ 0.8
BRAT1-205ENST00000473879 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
BRAT1-205ENST00000473879 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
BRAT1-205ENST00000473879 ABCC3O15438 1527 aa20.02■□□□□ 0.79
BRAT1-205ENST00000473879 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
BRAT1-205ENST00000473879 PZPP20742 1482 aa20.01■□□□□ 0.79
BRAT1-205ENST00000473879 CEP152O94986 1710 aa20.01■□□□□ 0.79
BRAT1-205ENST00000473879 STRCQ7RTU9 1775 aa20■□□□□ 0.79
BRAT1-205ENST00000473879 UNC13BO14795 1591 aa20■□□□□ 0.79
BRAT1-205ENST00000473879 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
BRAT1-205ENST00000473879 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
BRAT1-205ENST00000473879 CEP170BQ9Y4F5 1589 aaPredicted RBP19.98■□□□□ 0.79
BRAT1-205ENST00000473879 CAMSAP1Q5T5Y3 1602 aa19.98■□□□□ 0.79
BRAT1-205ENST00000473879 FBXO31Q5XUX0 539 aaPredicted RBP19.97■□□□□ 0.79
BRAT1-205ENST00000473879 TNRQ92752 1358 aa19.95■□□□□ 0.79
BRAT1-205ENST00000473879 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
BRAT1-205ENST00000473879 NAIPQ13075 1403 aa19.95■□□□□ 0.78
BRAT1-205ENST00000473879 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
BRAT1-205ENST00000473879 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
BRAT1-205ENST00000473879 KANK1Q14678 1352 aa19.92■□□□□ 0.78
BRAT1-205ENST00000473879 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
BRAT1-205ENST00000473879 SPATA31D1Q6ZQQ2 1576 aa19.91■□□□□ 0.78
BRAT1-205ENST00000473879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.78
BRAT1-205ENST00000473879 IQGAP3Q86VI3 1631 aa19.9■□□□□ 0.78
BRAT1-205ENST00000473879 PTPRTO14522 1441 aa19.89■□□□□ 0.77
BRAT1-205ENST00000473879 PLA2R1Q13018 1463 aa19.89■□□□□ 0.77
BRAT1-205ENST00000473879 EFCAB6Q5THR3 1501 aa19.89■□□□□ 0.77
BRAT1-205ENST00000473879 NLRP1Q9C000 1473 aa19.88■□□□□ 0.77
BRAT1-205ENST00000473879 ERVK-7P63135 1459 aa19.87■□□□□ 0.77
BRAT1-205ENST00000473879 ITGAEP38570 1179 aa19.86■□□□□ 0.77
BRAT1-205ENST00000473879 TET3O43151 1660 aa19.86■□□□□ 0.77
BRAT1-205ENST00000473879 PKD2Q13563 968 aa19.85■□□□□ 0.77
BRAT1-205ENST00000473879 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
BRAT1-205ENST00000473879 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
BRAT1-205ENST00000473879 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
BRAT1-205ENST00000473879 RPRD2Q5VT52 1461 aaKnown RBP19.82■□□□□ 0.76
BRAT1-205ENST00000473879 THEMISQ8N1K5 641 aaPredicted RBP19.82■□□□□ 0.76
BRAT1-205ENST00000473879 FBXO41Q8TF61 875 aa19.81■□□□□ 0.76
BRAT1-205ENST00000473879 UGGT1Q9NYU2 1555 aa19.81■□□□□ 0.76
BRAT1-205ENST00000473879 E9PCH4 1651 aa19.78■□□□□ 0.76
BRAT1-205ENST00000473879 NOS1P29475 1434 aa19.78■□□□□ 0.76
BRAT1-205ENST00000473879 UBR1Q8IWV7 1749 aa19.78■□□□□ 0.76
BRAT1-205ENST00000473879 SYNMO15061 1565 aa19.77■□□□□ 0.76
BRAT1-205ENST00000473879 NEURL4Q96JN8 1562 aa19.76■□□□□ 0.75
BRAT1-205ENST00000473879 ANKLE2Q86XL3 938 aa19.75■□□□□ 0.75
BRAT1-205ENST00000473879 CERKQ8TCT0 537 aa19.75■□□□□ 0.75
BRAT1-205ENST00000473879 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
BRAT1-205ENST00000473879 PIK3C2BO00750 1634 aa19.73■□□□□ 0.75
BRAT1-205ENST00000473879 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
BRAT1-205ENST00000473879 NUP155O75694 1391 aa19.71■□□□□ 0.75
BRAT1-205ENST00000473879 LTBP4Q8N2S1 1624 aa19.7■□□□□ 0.74
BRAT1-205ENST00000473879 IDI1Q13907 227 aa19.7■□□□□ 0.74
BRAT1-205ENST00000473879 MED14O60244 1454 aa19.69■□□□□ 0.74
BRAT1-205ENST00000473879 SLC52A1Q9NWF4 448 aa19.69■□□□□ 0.74
BRAT1-205ENST00000473879 IQGAP1P46940 1657 aa19.68■□□□□ 0.74
BRAT1-205ENST00000473879 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
BRAT1-205ENST00000473879 SLIT1O75093 1534 aa19.66■□□□□ 0.74
BRAT1-205ENST00000473879 STAG3Q9UJ98 1225 aa19.66■□□□□ 0.74
BRAT1-205ENST00000473879 RAB3GAP2Q9H2M9 1393 aa19.66■□□□□ 0.74
BRAT1-205ENST00000473879 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
BRAT1-205ENST00000473879 SPHKAPQ2M3C7 1700 aa19.65■□□□□ 0.74
BRAT1-205ENST00000473879 ZNF335Q9H4Z2 1342 aaPredicted RBP19.65■□□□□ 0.74
BRAT1-205ENST00000473879 ADGRB3O60242 1522 aa19.65■□□□□ 0.74
BRAT1-205ENST00000473879 TRPM2O94759 1503 aa19.63■□□□□ 0.73
BRAT1-205ENST00000473879 TMEM2Q9UHN6 1383 aa19.63■□□□□ 0.73
BRAT1-205ENST00000473879 HRCP23327 699 aa19.63■□□□□ 0.73
BRAT1-205ENST00000473879 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
BRAT1-205ENST00000473879 ACIN1Q9UKV3 1341 aaKnown RBP19.62■□□□□ 0.73
BRAT1-205ENST00000473879 LTKP29376 864 aa19.62■□□□□ 0.73
BRAT1-205ENST00000473879 TXNDC2Q86VQ3 553 aa19.62■□□□□ 0.73
BRAT1-205ENST00000473879 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
BRAT1-205ENST00000473879 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
BRAT1-205ENST00000473879 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
BRAT1-205ENST00000473879 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
BRAT1-205ENST00000473879 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
BRAT1-205ENST00000473879 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms