RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TBC1D12O60347 775 aa7.56□□□□□ -1.2
TMEM39A-206ENST00000473684 EVI5O60447 810 aa7.56□□□□□ -1.2
TMEM39A-206ENST00000473684 IL27Q8NEV9 243 aa7.56□□□□□ -1.2
TMEM39A-206ENST00000473684 DIEXFQ68CQ4 756 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-206ENST00000473684 IRF6O14896 467 aa7.55□□□□□ -1.2
TMEM39A-206ENST00000473684 C7P10643 843 aa7.55□□□□□ -1.2
TMEM39A-206ENST00000473684 PRIM1P49642 420 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-206ENST00000473684 PTCD2Q8WV60 388 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-206ENST00000473684 GNPATO15228 680 aa7.54□□□□□ -1.2
TMEM39A-206ENST00000473684 CCDC102AQ96A19 550 aa7.54□□□□□ -1.2
TMEM39A-206ENST00000473684 WDR62O43379 1518 aa7.54□□□□□ -1.2
TMEM39A-206ENST00000473684 FCHSD2O94868 740 aa7.54□□□□□ -1.2
TMEM39A-206ENST00000473684 HIC1Q14526 733 aa7.54□□□□□ -1.2
TMEM39A-206ENST00000473684 FECHP22830 423 aa7.53□□□□□ -1.2
TMEM39A-206ENST00000473684 SLC34A2O95436 690 aa7.52□□□□□ -1.21
TMEM39A-206ENST00000473684 AMHR2Q16671 573 aa7.52□□□□□ -1.21
TMEM39A-206ENST00000473684 ANO8Q9HCE9 1232 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-206ENST00000473684 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
TMEM39A-206ENST00000473684 METRNQ9UJH8 293 aa7.52□□□□□ -1.21
TMEM39A-206ENST00000473684 PTGDRQ13258 359 aa7.51□□□□□ -1.21
TMEM39A-206ENST00000473684 C3orf67Q6ZVT6 689 aa7.51□□□□□ -1.21
TMEM39A-206ENST00000473684 BAZ1AQ9NRL2 1556 aaPredicted RBP7.51□□□□□ -1.21
TMEM39A-206ENST00000473684 FAM117AQ9C073 453 aa7.5□□□□□ -1.21
TMEM39A-206ENST00000473684 ZNF316A6NFI3 1004 aaPredicted RBP7.49□□□□□ -1.21
TMEM39A-206ENST00000473684 POTEIP0CG38 1075 aa7.49□□□□□ -1.21
TMEM39A-206ENST00000473684 PARP9Q8IXQ6 854 aa7.49□□□□□ -1.21
TMEM39A-206ENST00000473684 KIF21AQ7Z4S6 1674 aa7.49□□□□□ -1.21
TMEM39A-206ENST00000473684 ERICH6BQ5W0A0 696 aa7.49□□□□□ -1.21
TMEM39A-206ENST00000473684 PLEKHG3A1L390 1219 aa7.47□□□□□ -1.21
TMEM39A-206ENST00000473684 PHF14O94880 888 aa7.47□□□□□ -1.21
TMEM39A-206ENST00000473684 EN1Q05925 392 aaPredicted RBP7.46□□□□□ -1.21
TMEM39A-206ENST00000473684 DDRGK1Q96HY6 314 aa7.46□□□□□ -1.22
TMEM39A-206ENST00000473684 EPAS1Q99814 870 aa7.46□□□□□ -1.22
TMEM39A-206ENST00000473684 NPDC1Q9NQX5 325 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-206ENST00000473684 ATAD2BQ9ULI0 1458 aa7.46□□□□□ -1.22
TMEM39A-206ENST00000473684 ARXQ96QS3 562 aa7.46□□□□□ -1.22
TMEM39A-206ENST00000473684 CDHR5Q9HBB8 845 aa7.45□□□□□ -1.22
TMEM39A-206ENST00000473684 PCDHGA4Q9Y5G9 962 aa7.44□□□□□ -1.22
TMEM39A-206ENST00000473684 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
TMEM39A-206ENST00000473684 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-206ENST00000473684 KDM4FA0A1W2PPD8 638 aa7.43□□□□□ -1.22
TMEM39A-206ENST00000473684 MAP3K7O43318 606 aa7.42□□□□□ -1.22
TMEM39A-206ENST00000473684 TTLL12Q14166 644 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-206ENST00000473684 SUPT16HQ9Y5B9 1047 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-206ENST00000473684 BAZ1BQ9UIG0 1483 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-206ENST00000473684 POTEHQ6S545 545 aa7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 SLAIN1Q8ND83 568 aa7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 TYW1BQ6NUM6 668 aa7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 RBM33Q96EV2 1170 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 TSR1Q2NL82 804 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-206ENST00000473684 SUPT5HO00267 1087 aaKnown RBP7.4□□□□□ -1.22
TMEM39A-206ENST00000473684 GOPCQ9HD26 462 aa7.4□□□□□ -1.22
TMEM39A-206ENST00000473684 MS4A1P11836 297 aa7.4□□□□□ -1.23
TMEM39A-206ENST00000473684 JPH4Q96JJ6 628 aa7.4□□□□□ -1.23
TMEM39A-206ENST00000473684 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.23
TMEM39A-206ENST00000473684 FBXW7Q969H0 707 aa7.39□□□□□ -1.23
TMEM39A-206ENST00000473684 PHOX2BQ99453 314 aa7.38□□□□□ -1.23
TMEM39A-206ENST00000473684 ZMYND15Q9H091 742 aa7.38□□□□□ -1.23
TMEM39A-206ENST00000473684 FOSBP53539 338 aa7.37□□□□□ -1.23
TMEM39A-206ENST00000473684 PKNOX2Q96KN3 472 aa7.37□□□□□ -1.23
TMEM39A-206ENST00000473684 SP7Q8TDD2 431 aaPredicted RBP7.36□□□□□ -1.23
TMEM39A-206ENST00000473684 CLCN1P35523 988 aa7.36□□□□□ -1.23
TMEM39A-206ENST00000473684 YTHDC1Q96MU7 727 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-206ENST00000473684 GPCPD1Q9NPB8 672 aa7.35□□□□□ -1.23
TMEM39A-206ENST00000473684 SALL2Q9Y467 1007 aaPredicted RBP7.35□□□□□ -1.23
TMEM39A-206ENST00000473684 MDM2Q00987 491 aaPredicted RBP7.35□□□□□ -1.23
TMEM39A-206ENST00000473684 MRC2Q9UBG0 1479 aa7.35□□□□□ -1.23
TMEM39A-206ENST00000473684 CERKQ8TCT0 537 aa7.34□□□□□ -1.23
TMEM39A-206ENST00000473684 C6orf132Q5T0Z8 1188 aa7.34□□□□□ -1.23
TMEM39A-206ENST00000473684 HOMEZQ8IX15 550 aa7.34□□□□□ -1.23
TMEM39A-206ENST00000473684 METTL3Q86U44 580 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-206ENST00000473684 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
TMEM39A-206ENST00000473684 ZDHHC16Q969W1 377 aa7.33□□□□□ -1.24
TMEM39A-206ENST00000473684 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
TMEM39A-206ENST00000473684 OATP04181 439 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 HOXB3P14651 431 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 ZNF454Q8N9F8 522 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 PODXL2Q9NZ53 605 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 POTEJP0CG39 1038 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 SH3D19Q5HYK7 790 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 PCMTD1Q96MG8 357 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 RSPH6AQ9H0K4 717 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 RBM27Q9P2N5 1060 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 ADGRG1Q9Y653 693 aa7.32□□□□□ -1.24
TMEM39A-206ENST00000473684 NUDT7P0C024 238 aa7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 DOK7Q18PE1 504 aa7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 KHSRPQ92945 711 aaKnown RBP eCLIP7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 ONECUT3O60422 494 aaPredicted RBP7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 DEKP35659 375 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 FLIIQ13045 1269 aa7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 ARSIQ5FYB1 569 aa7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 PXYLP1Q8TE99 480 aa7.31□□□□□ -1.24
TMEM39A-206ENST00000473684 ADAM33Q9BZ11 813 aa7.3□□□□□ -1.24
TMEM39A-206ENST00000473684 FAM217BQ9NTX9 383 aaPredicted RBP7.3□□□□□ -1.24
TMEM39A-206ENST00000473684 PDS5BQ9NTI5 1447 aa7.3□□□□□ -1.24
TMEM39A-206ENST00000473684 LOC105371045A0A1W2PR82 267 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms