RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 RIMS1Q86UR5 1692 aaKnown RBP28.7■■■□□ 2.19
CTDSP1-207ENST00000473420 MROH1Q8NDA8 1641 aa28.69■■■□□ 2.18
CTDSP1-207ENST00000473420 PPP6R1Q9UPN7 881 aa28.69■■■□□ 2.18
CTDSP1-207ENST00000473420 PRDM15P57071 1507 aaPredicted RBP28.68■■■□□ 2.18
CTDSP1-207ENST00000473420 HFM1A2PYH4 1435 aa28.68■■■□□ 2.18
CTDSP1-207ENST00000473420 MROH2AA6NES4 1674 aa28.67■■■□□ 2.18
CTDSP1-207ENST00000473420 GGT6Q6P531 493 aa28.66■■■□□ 2.18
CTDSP1-207ENST00000473420 ZC3H13Q5T200 1668 aaKnown RBP28.66■■■□□ 2.18
CTDSP1-207ENST00000473420 NAIPQ13075 1403 aa28.66■■■□□ 2.18
CTDSP1-207ENST00000473420 CNTLNQ9NXG0 1405 aa28.66■■■□□ 2.18
CTDSP1-207ENST00000473420 CLTCQ00610 1675 aaKnown RBP28.64■■■□□ 2.18
CTDSP1-207ENST00000473420 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.17
CTDSP1-207ENST00000473420 UNC13BO14795 1591 aa28.62■■■□□ 2.17
CTDSP1-207ENST00000473420 PTPRMP28827 1452 aa28.6■■■□□ 2.17
CTDSP1-207ENST00000473420 ESF1Q9H501 851 aaKnown RBP28.6■■■□□ 2.17
CTDSP1-207ENST00000473420 VWDEQ8N2E2 1590 aa28.58■■■□□ 2.17
CTDSP1-207ENST00000473420 CEP152O94986 1710 aa28.57■■■□□ 2.16
CTDSP1-207ENST00000473420 ABCC3O15438 1527 aa28.56■■■□□ 2.16
CTDSP1-207ENST00000473420 C3P01024 1663 aa28.56■■■□□ 2.16
CTDSP1-207ENST00000473420 KANK1Q14678 1352 aa28.55■■■□□ 2.16
CTDSP1-207ENST00000473420 WASHC2CQ9Y4E1 1318 aa28.53■■■□□ 2.16
CTDSP1-207ENST00000473420 LMTK2Q8IWU2 1503 aa28.53■■■□□ 2.16
CTDSP1-207ENST00000473420 CAMSAP1Q5T5Y3 1602 aa28.52■■■□□ 2.16
CTDSP1-207ENST00000473420 IQGAP3Q86VI3 1631 aa28.51■■■□□ 2.15
CTDSP1-207ENST00000473420 ZMYM3Q14202 1370 aa28.49■■■□□ 2.15
CTDSP1-207ENST00000473420 SETD5Q9C0A6 1442 aa28.47■■■□□ 2.15
CTDSP1-207ENST00000473420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.47■■■□□ 2.154e-17■□□□□ 10.2
CTDSP1-207ENST00000473420 TRIM26Q12899 539 aaPredicted RBP28.46■■■□□ 2.15
CTDSP1-207ENST00000473420 TET3O43151 1660 aa28.45■■■□□ 2.15
CTDSP1-207ENST00000473420 PZPP20742 1482 aa28.44■■■□□ 2.14
CTDSP1-207ENST00000473420 EFCAB6Q5THR3 1501 aa28.43■■■□□ 2.14
CTDSP1-207ENST00000473420 ARHGAP31Q2M1Z3 1444 aa28.43■■■□□ 2.14
CTDSP1-207ENST00000473420 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
CTDSP1-207ENST00000473420 NPATQ14207 1427 aa28.41■■■□□ 2.14
CTDSP1-207ENST00000473420 NUP155O75694 1391 aa28.4■■■□□ 2.14
CTDSP1-207ENST00000473420 CEBPAP49715 358 aaPredicted RBP28.39■■■□□ 2.14
CTDSP1-207ENST00000473420 SETD1BQ9UPS6 1966 aaKnown RBP28.39■■■□□ 2.13
CTDSP1-207ENST00000473420 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
CTDSP1-207ENST00000473420 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
CTDSP1-207ENST00000473420 PREX1Q8TCU6 1659 aa28.36■■■□□ 2.13
CTDSP1-207ENST00000473420 RPRD2Q5VT52 1461 aaKnown RBP28.35■■■□□ 2.13
CTDSP1-207ENST00000473420 SPATA31D1Q6ZQQ2 1576 aa28.34■■■□□ 2.13
CTDSP1-207ENST00000473420 E9PCH4 1651 aa28.33■■■□□ 2.13
CTDSP1-207ENST00000473420 HRCP23327 699 aa28.32■■■□□ 2.12
CTDSP1-207ENST00000473420 PLPPR3Q6T4P5 718 aa28.32■■■□□ 2.12
CTDSP1-207ENST00000473420 ERVK-7P63135 1459 aa28.31■■■□□ 2.12
CTDSP1-207ENST00000473420 CFAP65Q6ZU64 1925 aaKnown RBP28.31■■■□□ 2.12
CTDSP1-207ENST00000473420 TRIM52Q96A61 297 aa28.3■■■□□ 2.12
CTDSP1-207ENST00000473420 MYO3AQ8NEV4 1616 aa28.29■■■□□ 2.12
CTDSP1-207ENST00000473420 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
CTDSP1-207ENST00000473420 ZNF142P52746 1687 aaPredicted RBP28.26■■■□□ 2.11
CTDSP1-207ENST00000473420 TNRQ92752 1358 aa28.24■■■□□ 2.11
CTDSP1-207ENST00000473420 NOS1P29475 1434 aa28.23■■■□□ 2.11
CTDSP1-207ENST00000473420 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
CTDSP1-207ENST00000473420 SPHKAPQ2M3C7 1700 aa28.21■■■□□ 2.11
CTDSP1-207ENST00000473420 SYNMO15061 1565 aa28.2■■■□□ 2.11
CTDSP1-207ENST00000473420 NLRP1Q9C000 1473 aa28.2■■■□□ 2.1
CTDSP1-207ENST00000473420 SLC4A1APQ9BWU0 796 aaKnown RBP28.19■■■□□ 2.1
CTDSP1-207ENST00000473420 LMTK3Q96Q04 1460 aa28.19■■■□□ 2.1
CTDSP1-207ENST00000473420 CEP170BQ9Y4F5 1589 aaPredicted RBP28.18■■■□□ 2.1
CTDSP1-207ENST00000473420 A2ML1A8K2U0 1454 aa28.15■■■□□ 2.1
CTDSP1-207ENST00000473420 MPHOSPH9Q99550 1183 aa28.15■■■□□ 2.1
CTDSP1-207ENST00000473420 PIK3C2BO00750 1634 aa28.14■■■□□ 2.1
CTDSP1-207ENST00000473420 PKD2Q13563 968 aa28.14■■■□□ 2.1
CTDSP1-207ENST00000473420 PTPRTO14522 1441 aa28.14■■■□□ 2.1
CTDSP1-207ENST00000473420 KDM5AP29375 1690 aaKnown RBP28.12■■■□□ 2.09
CTDSP1-207ENST00000473420 TRPM2O94759 1503 aa28.11■■■□□ 2.09
CTDSP1-207ENST00000473420 UBR1Q8IWV7 1749 aa28.09■■■□□ 2.09
CTDSP1-207ENST00000473420 SLC52A1Q9NWF4 448 aa28.08■■■□□ 2.09
CTDSP1-207ENST00000473420 UGGT1Q9NYU2 1555 aa28.07■■■□□ 2.08
CTDSP1-207ENST00000473420 ADGRB3O60242 1522 aa28.03■■■□□ 2.08
CTDSP1-207ENST00000473420 PLA2R1Q13018 1463 aa28.03■■■□□ 2.08
CTDSP1-207ENST00000473420 PCGF6Q9BYE7 350 aa28.03■■■□□ 2.08
CTDSP1-207ENST00000473420 CLTCL1P53675 1640 aa28.03■■■□□ 2.08
CTDSP1-207ENST00000473420 IDI1Q13907 227 aa28.02■■■□□ 2.08
CTDSP1-207ENST00000473420 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
CTDSP1-207ENST00000473420 KIF1BO60333 1816 aa27.99■■■□□ 2.07
CTDSP1-207ENST00000473420 MYO5BQ9ULV0 1848 aa27.98■■■□□ 2.07
CTDSP1-207ENST00000473420 FOXD1Q16676 465 aa27.98■■■□□ 2.07
CTDSP1-207ENST00000473420 THEMISQ8N1K5 641 aaPredicted RBP27.97■■■□□ 2.07
CTDSP1-207ENST00000473420 HSPA2P54652 639 aa27.95■■■□□ 2.06
CTDSP1-207ENST00000473420 SLIT1O75093 1534 aa27.93■■■□□ 2.06
CTDSP1-207ENST00000473420 POLR1AO95602 1720 aaPredicted RBP27.93■■■□□ 2.06
CTDSP1-207ENST00000473420 CCDC144AA2RUR9 1427 aa27.92■■■□□ 2.06
CTDSP1-207ENST00000473420 STRCQ7RTU9 1775 aa27.92■■■□□ 2.06
CTDSP1-207ENST00000473420 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
CTDSP1-207ENST00000473420 ARHGAP23Q9P227 1491 aa27.91■■■□□ 2.06
CTDSP1-207ENST00000473420 ANKRD30BQ9BXX2 1392 aa27.91■■■□□ 2.06
CTDSP1-207ENST00000473420 DHX57Q6P158 1386 aaKnown RBP27.88■■■□□ 2.05
CTDSP1-207ENST00000473420 NEURL4Q96JN8 1562 aa27.88■■■□□ 2.05
CTDSP1-207ENST00000473420 TMEM2Q9UHN6 1383 aa27.86■■■□□ 2.05
CTDSP1-207ENST00000473420 CHGAP10645 457 aaKnown RBP27.83■■■□□ 2.05
CTDSP1-207ENST00000473420 ANKLE2Q86XL3 938 aa27.81■■■□□ 2.04
CTDSP1-207ENST00000473420 ZFYVE9O95405 1425 aa27.81■■■□□ 2.04
CTDSP1-207ENST00000473420 SCAF11Q99590 1463 aaKnown RBP27.81■■■□□ 2.04
CTDSP1-207ENST00000473420 MED14O60244 1454 aa27.79■■■□□ 2.04
CTDSP1-207ENST00000473420 SPATA31E1Q6ZUB1 1445 aa27.78■■■□□ 2.04
CTDSP1-207ENST00000473420 RIMS2Q9UQ26 1411 aa27.78■■■□□ 2.04
CTDSP1-207ENST00000473420 EID1Q9Y6B2 187 aa27.77■■■□□ 2.04
CTDSP1-207ENST00000473420 NEXMIFQ5QGS0 1516 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms