RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 NUP155O75694 1391 aa28.01■■■□□ 2.08
TNFRSF25-211ENST00000473343 DEPDC5O75140 1603 aa28■■■□□ 2.07
TNFRSF25-211ENST00000473343 KDM5DQ9BY66 1539 aa28■■■□□ 2.07
TNFRSF25-211ENST00000473343 DHX57Q6P158 1386 aaKnown RBP27.99■■■□□ 2.07
TNFRSF25-211ENST00000473343 RNF17Q9BXT8 1623 aaKnown RBP27.99■■■□□ 2.07
TNFRSF25-211ENST00000473343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.99■■■□□ 2.07
TNFRSF25-211ENST00000473343 SIGLEC1Q9BZZ2 1709 aa27.97■■■□□ 2.07
TNFRSF25-211ENST00000473343 MROH1Q8NDA8 1641 aa27.97■■■□□ 2.07
TNFRSF25-211ENST00000473343 PRDM15P57071 1507 aaPredicted RBP27.97■■■□□ 2.07
TNFRSF25-211ENST00000473343 PZPP20742 1482 aa27.96■■■□□ 2.07
TNFRSF25-211ENST00000473343 GGT6Q6P531 493 aa27.95■■■□□ 2.07
TNFRSF25-211ENST00000473343 MPHOSPH9Q99550 1183 aa27.95■■■□□ 2.07
TNFRSF25-211ENST00000473343 KANK1Q14678 1352 aa27.93■■■□□ 2.06
TNFRSF25-211ENST00000473343 FAM135AQ9P2D6 1515 aa27.93■■■□□ 2.06
TNFRSF25-211ENST00000473343 VWDEQ8N2E2 1590 aa27.92■■■□□ 2.06
TNFRSF25-211ENST00000473343 SLC4A1APQ9BWU0 796 aaKnown RBP27.92■■■□□ 2.06
TNFRSF25-211ENST00000473343 IQGAP3Q86VI3 1631 aa27.92■■■□□ 2.06
TNFRSF25-211ENST00000473343 ARID4BQ4LE39 1312 aaPredicted RBP27.9■■■□□ 2.06
TNFRSF25-211ENST00000473343 CCER1Q8TC90 406 aaPredicted RBP27.89■■■□□ 2.05
TNFRSF25-211ENST00000473343 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
TNFRSF25-211ENST00000473343 LMTK2Q8IWU2 1503 aa27.84■■■□□ 2.05
TNFRSF25-211ENST00000473343 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
TNFRSF25-211ENST00000473343 PKD2Q13563 968 aa27.83■■■□□ 2.05
TNFRSF25-211ENST00000473343 MLECQ14165 292 aa27.83■■■□□ 2.05
TNFRSF25-211ENST00000473343 ABCC3O15438 1527 aa27.82■■■□□ 2.04
TNFRSF25-211ENST00000473343 TET3O43151 1660 aa27.78■■■□□ 2.04
TNFRSF25-211ENST00000473343 FOXD1Q16676 465 aa27.78■■■□□ 2.04
TNFRSF25-211ENST00000473343 CLSPNQ9HAW4 1339 aa27.78■■■□□ 2.04
TNFRSF25-211ENST00000473343 ZC3H13Q5T200 1668 aaKnown RBP27.77■■■□□ 2.04
TNFRSF25-211ENST00000473343 CEP152O94986 1710 aa27.76■■■□□ 2.03
TNFRSF25-211ENST00000473343 EFCAB6Q5THR3 1501 aa27.75■■■□□ 2.03
TNFRSF25-211ENST00000473343 ANKRD30BQ9BXX2 1392 aa27.71■■■□□ 2.03
TNFRSF25-211ENST00000473343 ARHGAP31Q2M1Z3 1444 aa27.7■■■□□ 2.03
TNFRSF25-211ENST00000473343 ESF1Q9H501 851 aaKnown RBP27.7■■■□□ 2.03
TNFRSF25-211ENST00000473343 CAMSAP1Q5T5Y3 1602 aa27.7■■■□□ 2.02
TNFRSF25-211ENST00000473343 E9PCH4 1651 aa27.7■■■□□ 2.02
TNFRSF25-211ENST00000473343 NPATQ14207 1427 aa27.7■■■□□ 2.02
TNFRSF25-211ENST00000473343 CNTLNQ9NXG0 1405 aa27.69■■■□□ 2.02
TNFRSF25-211ENST00000473343 RPRD2Q5VT52 1461 aaKnown RBP27.69■■■□□ 2.02
TNFRSF25-211ENST00000473343 CLTCQ00610 1675 aaKnown RBP27.67■■■□□ 2.02
TNFRSF25-211ENST00000473343 PLA2R1Q13018 1463 aa27.64■■■□□ 2.02
TNFRSF25-211ENST00000473343 PTPRTO14522 1441 aa27.63■■■□□ 2.01
TNFRSF25-211ENST00000473343 ZMYM3Q14202 1370 aa27.62■■■□□ 2.01
TNFRSF25-211ENST00000473343 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
TNFRSF25-211ENST00000473343 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
TNFRSF25-211ENST00000473343 FER1L4A9Z1Z3 1794 aa27.59■■■□□ 2.01
TNFRSF25-211ENST00000473343 MROH2AA6NES4 1674 aa27.58■■■□□ 2.01
TNFRSF25-211ENST00000473343 NOS1P29475 1434 aa27.57■■■□□ 2
TNFRSF25-211ENST00000473343 TRPM2O94759 1503 aa27.57■■■□□ 2
TNFRSF25-211ENST00000473343 MADDQ8WXG6 1647 aa27.57■■■□□ 2
TNFRSF25-211ENST00000473343 SPHKAPQ2M3C7 1700 aa27.55■■■□□ 2
TNFRSF25-211ENST00000473343 CCDC144AA2RUR9 1427 aa27.55■■■□□ 2
TNFRSF25-211ENST00000473343 NEUROD1Q13562 356 aa27.54■■■□□ 2
TNFRSF25-211ENST00000473343 FBXO31Q5XUX0 539 aaPredicted RBP27.54■■■□□ 2
TNFRSF25-211ENST00000473343 ERVK-7P63135 1459 aa27.54■■■□□ 2
TNFRSF25-211ENST00000473343 PREX1Q8TCU6 1659 aa27.51■■■□□ 2
TNFRSF25-211ENST00000473343 SPATA31D1Q6ZQQ2 1576 aa27.5■■□□□ 1.99
TNFRSF25-211ENST00000473343 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
TNFRSF25-211ENST00000473343 SYNMO15061 1565 aa27.48■■□□□ 1.99
TNFRSF25-211ENST00000473343 CEBPAP49715 358 aaPredicted RBP27.48■■□□□ 1.99
TNFRSF25-211ENST00000473343 CFAP65Q6ZU64 1925 aaKnown RBP27.47■■□□□ 1.99
TNFRSF25-211ENST00000473343 C3P01024 1663 aa27.46■■□□□ 1.99
TNFRSF25-211ENST00000473343 UGGT1Q9NYU2 1555 aa27.46■■□□□ 1.99
TNFRSF25-211ENST00000473343 CLTCL1P53675 1640 aa27.46■■□□□ 1.99
TNFRSF25-211ENST00000473343 ZEB1P37275 1124 aaPredicted RBP27.44■■□□□ 1.98
TNFRSF25-211ENST00000473343 SLC52A1Q9NWF4 448 aa27.44■■□□□ 1.98
TNFRSF25-211ENST00000473343 TIMELESSQ9UNS1 1208 aa27.42■■□□□ 1.98
TNFRSF25-211ENST00000473343 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
TNFRSF25-211ENST00000473343 TNRQ92752 1358 aa27.41■■□□□ 1.98
TNFRSF25-211ENST00000473343 IDI1Q13907 227 aa27.4■■□□□ 1.98
TNFRSF25-211ENST00000473343 TONSLQ96HA7 1378 aa27.4■■□□□ 1.98
TNFRSF25-211ENST00000473343 PTPRMP28827 1452 aa27.39■■□□□ 1.97
TNFRSF25-211ENST00000473343 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.97
TNFRSF25-211ENST00000473343 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
TNFRSF25-211ENST00000473343 SPATA31E1Q6ZUB1 1445 aa27.37■■□□□ 1.97
TNFRSF25-211ENST00000473343 NEURL4Q96JN8 1562 aa27.35■■□□□ 1.97
TNFRSF25-211ENST00000473343 L3MBTL2Q969R5 705 aa27.34■■□□□ 1.97
TNFRSF25-211ENST00000473343 ADGRB3O60242 1522 aa27.32■■□□□ 1.96
TNFRSF25-211ENST00000473343 RGL3Q3MIN7 710 aa27.31■■□□□ 1.96
TNFRSF25-211ENST00000473343 NLRP1Q9C000 1473 aa27.3■■□□□ 1.96
TNFRSF25-211ENST00000473343 KIF1BO60333 1816 aa27.3■■□□□ 1.96
TNFRSF25-211ENST00000473343 CHGAP10645 457 aaKnown RBP27.3■■□□□ 1.96
TNFRSF25-211ENST00000473343 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
TNFRSF25-211ENST00000473343 STAG3Q9UJ98 1225 aa27.24■■□□□ 1.95
TNFRSF25-211ENST00000473343 PPP1R15AO75807 674 aaPredicted RBP27.23■■□□□ 1.95
TNFRSF25-211ENST00000473343 DCAF11Q8TEB1 546 aa27.23■■□□□ 1.95
TNFRSF25-211ENST00000473343 ZNF326Q5BKZ1 582 aaKnown RBP27.22■■□□□ 1.95
TNFRSF25-211ENST00000473343 MYO3AQ8NEV4 1616 aa27.22■■□□□ 1.95
TNFRSF25-211ENST00000473343 A2ML1A8K2U0 1454 aa27.22■■□□□ 1.95
TNFRSF25-211ENST00000473343 RPGRIP1LQ68CZ1 1315 aa27.2■■□□□ 1.95
TNFRSF25-211ENST00000473343 KDM5AP29375 1690 aaKnown RBP27.19■■□□□ 1.94
TNFRSF25-211ENST00000473343 STAC3Q96MF2 364 aa27.18■■□□□ 1.94
TNFRSF25-211ENST00000473343 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
TNFRSF25-211ENST00000473343 SETD1BQ9UPS6 1966 aaKnown RBP27.18■■□□□ 1.94
TNFRSF25-211ENST00000473343 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
TNFRSF25-211ENST00000473343 CEP170BQ9Y4F5 1589 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF25-211ENST00000473343 MYO5BQ9ULV0 1848 aa27.15■■□□□ 1.94
TNFRSF25-211ENST00000473343 NEXMIFQ5QGS0 1516 aa27.14■■□□□ 1.94
TNFRSF25-211ENST00000473343 UHRF1BP1Q6BDS2 1440 aa27.13■■□□□ 1.93
TNFRSF25-211ENST00000473343 MYOM2P54296 1465 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms