RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 NPATQ14207 1427 aa19.65■□□□□ 0.74
C9orf85-204ENST00000473252 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
C9orf85-204ENST00000473252 ABCC5O15440 1437 aa19.63■□□□□ 0.73
C9orf85-204ENST00000473252 UHRF1BP1Q6BDS2 1440 aa19.63■□□□□ 0.73
C9orf85-204ENST00000473252 KIF3BO15066 747 aa19.63■□□□□ 0.73
C9orf85-204ENST00000473252 DAPK1P53355 1430 aa19.62■□□□□ 0.73
C9orf85-204ENST00000473252 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
C9orf85-204ENST00000473252 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
C9orf85-204ENST00000473252 KDM5DQ9BY66 1539 aa19.59■□□□□ 0.73
C9orf85-204ENST00000473252 ZC3H13Q5T200 1668 aaKnown RBP19.57■□□□□ 0.72
C9orf85-204ENST00000473252 ERBINQ96RT1 1412 aa19.56■□□□□ 0.72
C9orf85-204ENST00000473252 HSPA2P54652 639 aa19.55■□□□□ 0.72
C9orf85-204ENST00000473252 PTPRKQ15262 1439 aa19.55■□□□□ 0.72
C9orf85-204ENST00000473252 ANKRD30AQ9BXX3 1397 aa19.55■□□□□ 0.72
C9orf85-204ENST00000473252 KIF15Q9NS87 1388 aa19.55■□□□□ 0.72
C9orf85-204ENST00000473252 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
C9orf85-204ENST00000473252 ADGRL2O95490 1459 aa19.53■□□□□ 0.72
C9orf85-204ENST00000473252 ZNF142P52746 1687 aaPredicted RBP19.52■□□□□ 0.71
C9orf85-204ENST00000473252 PZPP20742 1482 aa19.51■□□□□ 0.71
C9orf85-204ENST00000473252 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
C9orf85-204ENST00000473252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
C9orf85-204ENST00000473252 FAM50AQ14320 339 aaKnown RBP19.5■□□□□ 0.71
C9orf85-204ENST00000473252 RRP7BPQ9NSQ0 103 aa19.5■□□□□ 0.71
C9orf85-204ENST00000473252 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
C9orf85-204ENST00000473252 MYO3AQ8NEV4 1616 aa19.5■□□□□ 0.71
C9orf85-204ENST00000473252 MROH1Q8NDA8 1641 aa19.49■□□□□ 0.71
C9orf85-204ENST00000473252 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
C9orf85-204ENST00000473252 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
C9orf85-204ENST00000473252 ABCC3O15438 1527 aa19.47■□□□□ 0.71
C9orf85-204ENST00000473252 PRDM15P57071 1507 aaPredicted RBP19.47■□□□□ 0.71
C9orf85-204ENST00000473252 CEP170BQ9Y4F5 1589 aaPredicted RBP19.46■□□□□ 0.71
C9orf85-204ENST00000473252 CHIC2Q9UKJ5 165 aa19.45■□□□□ 0.7
C9orf85-204ENST00000473252 CEP152O94986 1710 aa19.45■□□□□ 0.7
C9orf85-204ENST00000473252 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
C9orf85-204ENST00000473252 KANK1Q14678 1352 aa19.43■□□□□ 0.7
C9orf85-204ENST00000473252 TNRQ92752 1358 aa19.43■□□□□ 0.7
C9orf85-204ENST00000473252 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
C9orf85-204ENST00000473252 PLA2R1Q13018 1463 aa19.42■□□□□ 0.7
C9orf85-204ENST00000473252 ROCK1Q13464 1354 aa19.42■□□□□ 0.7
C9orf85-204ENST00000473252 PTPRTO14522 1441 aa19.42■□□□□ 0.7
C9orf85-204ENST00000473252 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
C9orf85-204ENST00000473252 SPATA31D1Q6ZQQ2 1576 aa19.41■□□□□ 0.7
C9orf85-204ENST00000473252 NLRP1Q9C000 1473 aa19.41■□□□□ 0.7
C9orf85-204ENST00000473252 FBXO31Q5XUX0 539 aaPredicted RBP19.4■□□□□ 0.7
C9orf85-204ENST00000473252 ANKRD50Q9ULJ7 1429 aa19.39■□□□□ 0.69
C9orf85-204ENST00000473252 LMTK2Q8IWU2 1503 aa19.39■□□□□ 0.69
C9orf85-204ENST00000473252 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
C9orf85-204ENST00000473252 PKD2Q13563 968 aa19.38■□□□□ 0.69
C9orf85-204ENST00000473252 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
C9orf85-204ENST00000473252 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
C9orf85-204ENST00000473252 ERVK-7P63135 1459 aa19.36■□□□□ 0.69
C9orf85-204ENST00000473252 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
C9orf85-204ENST00000473252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.692e-6■□□□□ 8.5
C9orf85-204ENST00000473252 THEMISQ8N1K5 641 aaPredicted RBP19.33■□□□□ 0.68
C9orf85-204ENST00000473252 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
C9orf85-204ENST00000473252 UNC13BO14795 1591 aa19.31■□□□□ 0.68
C9orf85-204ENST00000473252 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
C9orf85-204ENST00000473252 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
C9orf85-204ENST00000473252 RPRD2Q5VT52 1461 aaKnown RBP19.28■□□□□ 0.68
C9orf85-204ENST00000473252 NCKAP5LQ9HCH0 1330 aa19.27■□□□□ 0.68
C9orf85-204ENST00000473252 TET3O43151 1660 aa19.27■□□□□ 0.68
C9orf85-204ENST00000473252 KDM5AP29375 1690 aaKnown RBP19.27■□□□□ 0.67
C9orf85-204ENST00000473252 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.67
C9orf85-204ENST00000473252 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
C9orf85-204ENST00000473252 ILDR1Q86SU0 546 aaPredicted RBP19.26■□□□□ 0.67
C9orf85-204ENST00000473252 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
C9orf85-204ENST00000473252 ITGAEP38570 1179 aa19.25■□□□□ 0.67
C9orf85-204ENST00000473252 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
C9orf85-204ENST00000473252 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
C9orf85-204ENST00000473252 NOS1P29475 1434 aa19.24■□□□□ 0.67
C9orf85-204ENST00000473252 IQGAP3Q86VI3 1631 aa19.23■□□□□ 0.67
C9orf85-204ENST00000473252 MED14O60244 1454 aa19.22■□□□□ 0.67
C9orf85-204ENST00000473252 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
C9orf85-204ENST00000473252 NEURL4Q96JN8 1562 aa19.21■□□□□ 0.67
C9orf85-204ENST00000473252 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
C9orf85-204ENST00000473252 LTBP4Q8N2S1 1624 aa19.21■□□□□ 0.67
C9orf85-204ENST00000473252 PIK3C2BO00750 1634 aa19.2■□□□□ 0.66
C9orf85-204ENST00000473252 IQSEC2Q5JU85 1478 aa19.2■□□□□ 0.66
C9orf85-204ENST00000473252 SLIT1O75093 1534 aa19.19■□□□□ 0.66
C9orf85-204ENST00000473252 SYNMO15061 1565 aa19.19■□□□□ 0.66
C9orf85-204ENST00000473252 ARHGAP23Q9P227 1491 aa19.17■□□□□ 0.66
C9orf85-204ENST00000473252 E9PCH4 1651 aa19.17■□□□□ 0.66
C9orf85-204ENST00000473252 NUP155O75694 1391 aa19.17■□□□□ 0.66
C9orf85-204ENST00000473252 IDI1Q13907 227 aa19.16■□□□□ 0.66
C9orf85-204ENST00000473252 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
C9orf85-204ENST00000473252 NPHP4O75161 1426 aaPredicted RBP19.16■□□□□ 0.66
C9orf85-204ENST00000473252 NAIPQ13075 1403 aa19.16■□□□□ 0.66
C9orf85-204ENST00000473252 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
C9orf85-204ENST00000473252 HFM1A2PYH4 1435 aa19.14■□□□□ 0.65
C9orf85-204ENST00000473252 SCAF11Q99590 1463 aaKnown RBP19.13■□□□□ 0.65
C9orf85-204ENST00000473252 ADGRB3O60242 1522 aa19.12■□□□□ 0.65
C9orf85-204ENST00000473252 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
C9orf85-204ENST00000473252 EID1Q9Y6B2 187 aa19.12■□□□□ 0.65
C9orf85-204ENST00000473252 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
C9orf85-204ENST00000473252 CPS1P31327 1500 aa19.1■□□□□ 0.65
C9orf85-204ENST00000473252 TXNDC2Q86VQ3 553 aa19.1■□□□□ 0.65
C9orf85-204ENST00000473252 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
C9orf85-204ENST00000473252 LTKP29376 864 aa19.07■□□□□ 0.64
C9orf85-204ENST00000473252 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
C9orf85-204ENST00000473252 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms