RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-208ENST00000473003 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF4-208ENST00000473003 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
RAPGEF4-208ENST00000473003 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
RAPGEF4-208ENST00000473003 PZPP20742 1482 aa13.63□□□□□ -0.23
RAPGEF4-208ENST00000473003 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
RAPGEF4-208ENST00000473003 SYCP2Q9BX26 1530 aa13.63□□□□□ -0.23
RAPGEF4-208ENST00000473003 ATP1B4Q9UN42 357 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF4-208ENST00000473003 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
RAPGEF4-208ENST00000473003 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
RAPGEF4-208ENST00000473003 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
RAPGEF4-208ENST00000473003 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
RAPGEF4-208ENST00000473003 FBXO31Q5XUX0 539 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF4-208ENST00000473003 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
RAPGEF4-208ENST00000473003 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
RAPGEF4-208ENST00000473003 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
RAPGEF4-208ENST00000473003 KDM5DQ9BY66 1539 aa13.58□□□□□ -0.24
RAPGEF4-208ENST00000473003 MIA2Q96PC5 1412 aa13.57□□□□□ -0.24
RAPGEF4-208ENST00000473003 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF4-208ENST00000473003 JCADQ9P266 1359 aa13.57□□□□□ -0.24
RAPGEF4-208ENST00000473003 ADGBQ8N7X0 1667 aa13.56□□□□□ -0.24
RAPGEF4-208ENST00000473003 LRRC9Q6ZRR7 1453 aa13.55□□□□□ -0.24
RAPGEF4-208ENST00000473003 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF4-208ENST00000473003 LRP6O75581 1613 aa13.54□□□□□ -0.24
RAPGEF4-208ENST00000473003 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
RAPGEF4-208ENST00000473003 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
RAPGEF4-208ENST00000473003 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAPGEF4-208ENST00000473003 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF4-208ENST00000473003 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
RAPGEF4-208ENST00000473003 PLEKHH2Q8IVE3 1493 aa13.51□□□□□ -0.25
RAPGEF4-208ENST00000473003 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
RAPGEF4-208ENST00000473003 MAP3K1Q13233 1512 aa13.5□□□□□ -0.25
RAPGEF4-208ENST00000473003 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
RAPGEF4-208ENST00000473003 RXRBP28702 533 aa13.5□□□□□ -0.25
RAPGEF4-208ENST00000473003 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF4-208ENST00000473003 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
RAPGEF4-208ENST00000473003 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
RAPGEF4-208ENST00000473003 GPATCH8Q9UKJ3 1502 aaKnown RBP13.48□□□□□ -0.25
RAPGEF4-208ENST00000473003 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
RAPGEF4-208ENST00000473003 SETBP1Q9Y6X0 1596 aa13.47□□□□□ -0.25
RAPGEF4-208ENST00000473003 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
RAPGEF4-208ENST00000473003 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
RAPGEF4-208ENST00000473003 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
RAPGEF4-208ENST00000473003 WASHC2CQ9Y4E1 1318 aa13.45□□□□□ -0.26
RAPGEF4-208ENST00000473003 RGS12O14924 1447 aa13.45□□□□□ -0.26
RAPGEF4-208ENST00000473003 EEA1Q15075 1411 aa13.45□□□□□ -0.26
RAPGEF4-208ENST00000473003 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
RAPGEF4-208ENST00000473003 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
RAPGEF4-208ENST00000473003 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
RAPGEF4-208ENST00000473003 SLIT1O75093 1534 aa13.44□□□□□ -0.26
RAPGEF4-208ENST00000473003 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
RAPGEF4-208ENST00000473003 KIF3BO15066 747 aa13.43□□□□□ -0.26
RAPGEF4-208ENST00000473003 TIAM1Q13009 1591 aa13.43□□□□□ -0.26
RAPGEF4-208ENST00000473003 FOXD1Q16676 465 aa13.43□□□□□ -0.26
RAPGEF4-208ENST00000473003 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
RAPGEF4-208ENST00000473003 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
RAPGEF4-208ENST00000473003 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
RAPGEF4-208ENST00000473003 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF4-208ENST00000473003 LTKP29376 864 aa13.41□□□□□ -0.26
RAPGEF4-208ENST00000473003 NKTRP30414 1462 aaKnown RBP13.4□□□□□ -0.26
RAPGEF4-208ENST00000473003 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
RAPGEF4-208ENST00000473003 SLAIN2Q9P270 581 aa13.39□□□□□ -0.27
RAPGEF4-208ENST00000473003 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF4-208ENST00000473003 MSH6P52701 1360 aa13.39□□□□□ -0.27
RAPGEF4-208ENST00000473003 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
RAPGEF4-208ENST00000473003 ABCC3O15438 1527 aa13.38□□□□□ -0.27
RAPGEF4-208ENST00000473003 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
RAPGEF4-208ENST00000473003 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 KCNA6P17658 529 aa13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 AHDC1Q5TGY3 1603 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 AFF2P51816 1311 aa13.37□□□□□ -0.27
RAPGEF4-208ENST00000473003 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF4-208ENST00000473003 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF4-208ENST00000473003 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF4-208ENST00000473003 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF4-208ENST00000473003 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
RAPGEF4-208ENST00000473003 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
RAPGEF4-208ENST00000473003 CAMSAP2Q08AD1 1489 aa13.34□□□□□ -0.27
RAPGEF4-208ENST00000473003 KDM5AP29375 1690 aaKnown RBP13.34□□□□□ -0.27
RAPGEF4-208ENST00000473003 CCNB3Q8WWL7 1395 aa13.33□□□□□ -0.27
RAPGEF4-208ENST00000473003 LRP5O75197 1615 aa13.33□□□□□ -0.28
RAPGEF4-208ENST00000473003 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
RAPGEF4-208ENST00000473003 EP400Q96L91 3159 aa13.32□□□□□ -0.28
RAPGEF4-208ENST00000473003 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
RAPGEF4-208ENST00000473003 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF4-208ENST00000473003 TET3O43151 1660 aa13.3□□□□□ -0.28
RAPGEF4-208ENST00000473003 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
RAPGEF4-208ENST00000473003 CCDC141Q6ZP82 1450 aa13.29□□□□□ -0.28
RAPGEF4-208ENST00000473003 QTRT2Q9H974 415 aaKnown RBP13.28□□□□□ -0.28
RAPGEF4-208ENST00000473003 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
RAPGEF4-208ENST00000473003 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
RAPGEF4-208ENST00000473003 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
RAPGEF4-208ENST00000473003 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
RAPGEF4-208ENST00000473003 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
RAPGEF4-208ENST00000473003 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
RAPGEF4-208ENST00000473003 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
RAPGEF4-208ENST00000473003 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
RAPGEF4-208ENST00000473003 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms