RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ATP10AO60312 1499 aa14.64□□□□□ -0.07
SMC4-213ENST00000472282 AFAP1Q8N556 730 aa14.64□□□□□ -0.07
SMC4-213ENST00000472282 KIDINS220Q9ULH0 1771 aa14.64□□□□□ -0.07
SMC4-213ENST00000472282 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
SMC4-213ENST00000472282 C9orf84Q5VXU9 1444 aa14.63□□□□□ -0.07
SMC4-213ENST00000472282 MLECQ14165 292 aa14.62□□□□□ -0.07
SMC4-213ENST00000472282 GPATCH8Q9UKJ3 1502 aaKnown RBP14.61□□□□□ -0.07
SMC4-213ENST00000472282 LMTK3Q96Q04 1460 aa14.6□□□□□ -0.07
SMC4-213ENST00000472282 SYCP2Q9BX26 1530 aa14.6□□□□□ -0.07
SMC4-213ENST00000472282 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
SMC4-213ENST00000472282 MLH3Q9UHC1 1453 aa14.59□□□□□ -0.07
SMC4-213ENST00000472282 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
SMC4-213ENST00000472282 TIAM1Q13009 1591 aa14.58□□□□□ -0.08
SMC4-213ENST00000472282 PAK3O75914 559 aaPredicted RBP14.57□□□□□ -0.08
SMC4-213ENST00000472282 OTUD5Q96G74 571 aa14.57□□□□□ -0.08
SMC4-213ENST00000472282 DCBLD2Q96PD2 775 aa14.57□□□□□ -0.08
SMC4-213ENST00000472282 EHBP1L1Q8N3D4 1523 aa14.56□□□□□ -0.08
SMC4-213ENST00000472282 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
SMC4-213ENST00000472282 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
SMC4-213ENST00000472282 ZNF777Q9ULD5 760 aaPredicted RBP14.55□□□□□ -0.08
SMC4-213ENST00000472282 C3P01024 1663 aa14.55□□□□□ -0.08
SMC4-213ENST00000472282 SUPT6HQ7KZ85 1726 aaKnown RBP14.55□□□□□ -0.08
SMC4-213ENST00000472282 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
SMC4-213ENST00000472282 INO80Q9ULG1 1556 aaPredicted RBP14.54□□□□□ -0.08
SMC4-213ENST00000472282 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
SMC4-213ENST00000472282 AGLP35573 1532 aa14.52□□□□□ -0.08
SMC4-213ENST00000472282 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
SMC4-213ENST00000472282 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.092e-9■□□□□ 8.7
SMC4-213ENST00000472282 PROM2Q8N271 834 aa14.52□□□□□ -0.09
SMC4-213ENST00000472282 CEBPAP49715 358 aaPredicted RBP14.51□□□□□ -0.09
SMC4-213ENST00000472282 ILDR1Q86SU0 546 aaPredicted RBP14.51□□□□□ -0.09
SMC4-213ENST00000472282 ATP7AQ04656 1500 aa14.51□□□□□ -0.09
SMC4-213ENST00000472282 POTEMA6NI47 508 aa14.5□□□□□ -0.09
SMC4-213ENST00000472282 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
SMC4-213ENST00000472282 HSPA2P54652 639 aa14.5□□□□□ -0.09
SMC4-213ENST00000472282 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
SMC4-213ENST00000472282 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
SMC4-213ENST00000472282 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
SMC4-213ENST00000472282 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
SMC4-213ENST00000472282 ADGBQ8N7X0 1667 aa14.48□□□□□ -0.09
SMC4-213ENST00000472282 PLXNC1O60486 1568 aa14.47□□□□□ -0.09
SMC4-213ENST00000472282 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
SMC4-213ENST00000472282 PLEKHH2Q8IVE3 1493 aa14.47□□□□□ -0.09
SMC4-213ENST00000472282 MBD5Q9P267 1494 aa14.46□□□□□ -0.09
SMC4-213ENST00000472282 SETD1BQ9UPS6 1966 aaKnown RBP14.46□□□□□ -0.09
SMC4-213ENST00000472282 CLTCQ00610 1675 aaKnown RBP14.46□□□□□ -0.1
SMC4-213ENST00000472282 SPAG9O60271 1321 aaKnown RBP14.45□□□□□ -0.1
SMC4-213ENST00000472282 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
SMC4-213ENST00000472282 MROH2AA6NES4 1674 aa14.45□□□□□ -0.1
SMC4-213ENST00000472282 POTEGQ6S5H5 508 aa14.43□□□□□ -0.1
SMC4-213ENST00000472282 A2MP01023 1474 aa14.43□□□□□ -0.1
SMC4-213ENST00000472282 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
SMC4-213ENST00000472282 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
SMC4-213ENST00000472282 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
SMC4-213ENST00000472282 PLEKHG5O94827 1062 aa14.4□□□□□ -0.1
SMC4-213ENST00000472282 KANK4Q5T7N3 995 aaPredicted RBP14.38□□□□□ -0.11
SMC4-213ENST00000472282 UHRF1BP1Q6BDS2 1440 aa14.38□□□□□ -0.11
SMC4-213ENST00000472282 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
SMC4-213ENST00000472282 CNTLNQ9NXG0 1405 aa14.37□□□□□ -0.11
SMC4-213ENST00000472282 ARHGEF5Q12774 1597 aa14.37□□□□□ -0.11
SMC4-213ENST00000472282 CCDC141Q6ZP82 1450 aa14.37□□□□□ -0.11
SMC4-213ENST00000472282 MAP3K1Q13233 1512 aa14.36□□□□□ -0.11
SMC4-213ENST00000472282 RTEL1-TNFRSF6BF6WH68 1400 aa14.36□□□□□ -0.11
SMC4-213ENST00000472282 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
SMC4-213ENST00000472282 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
SMC4-213ENST00000472282 ZMYM3Q14202 1370 aa14.34□□□□□ -0.11
SMC4-213ENST00000472282 ZNF142P52746 1687 aaPredicted RBP14.33□□□□□ -0.11
SMC4-213ENST00000472282 GGT6Q6P531 493 aa14.33□□□□□ -0.12
SMC4-213ENST00000472282 PHF12Q96QT6 1004 aa14.32□□□□□ -0.12
SMC4-213ENST00000472282 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
SMC4-213ENST00000472282 DHX29Q7Z478 1369 aaKnown RBP14.31□□□□□ -0.12
SMC4-213ENST00000472282 NPATQ14207 1427 aa14.31□□□□□ -0.12
SMC4-213ENST00000472282 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
SMC4-213ENST00000472282 FBXO41Q8TF61 875 aa14.3□□□□□ -0.12
SMC4-213ENST00000472282 PTPRKQ15262 1439 aa14.3□□□□□ -0.12
SMC4-213ENST00000472282 MYOM3Q5VTT5 1437 aa14.3□□□□□ -0.12
SMC4-213ENST00000472282 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
SMC4-213ENST00000472282 MIER1Q8N108 512 aa14.28□□□□□ -0.12
SMC4-213ENST00000472282 CEP170BQ9Y4F5 1589 aaPredicted RBP14.28□□□□□ -0.12
SMC4-213ENST00000472282 RNF17Q9BXT8 1623 aaKnown RBP14.26□□□□□ -0.13
SMC4-213ENST00000472282 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
SMC4-213ENST00000472282 NCOA1Q15788 1441 aa14.26□□□□□ -0.13
SMC4-213ENST00000472282 KIF3BO15066 747 aa14.26□□□□□ -0.13
SMC4-213ENST00000472282 RSPH4AQ5TD94 716 aa14.26□□□□□ -0.13
SMC4-213ENST00000472282 CEP152O94986 1710 aa14.26□□□□□ -0.13
SMC4-213ENST00000472282 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
SMC4-213ENST00000472282 KDM5DQ9BY66 1539 aa14.25□□□□□ -0.13
SMC4-213ENST00000472282 MIA2Q96PC5 1412 aa14.25□□□□□ -0.13
SMC4-213ENST00000472282 EIF2AK4Q9P2K8 1649 aaKnown RBP14.25□□□□□ -0.13
SMC4-213ENST00000472282 CFAP65Q6ZU64 1925 aaKnown RBP14.25□□□□□ -0.13
SMC4-213ENST00000472282 CERKQ8TCT0 537 aa14.24□□□□□ -0.13
SMC4-213ENST00000472282 PTPRTO14522 1441 aa14.24□□□□□ -0.13
SMC4-213ENST00000472282 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
SMC4-213ENST00000472282 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
SMC4-213ENST00000472282 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
SMC4-213ENST00000472282 FAM135AQ9P2D6 1515 aa14.22□□□□□ -0.13
SMC4-213ENST00000472282 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
SMC4-213ENST00000472282 TSPY4P0CV99 314 aa14.22□□□□□ -0.13
SMC4-213ENST00000472282 TSPY10P0CW01 314 aa14.22□□□□□ -0.13
SMC4-213ENST00000472282 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms