RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NEURL4Q96JN8 1562 aa30.99■■■□□ 2.55
SORT1-203ENST00000471996 ZNF644Q9H582 1327 aaPredicted RBP30.98■■■□□ 2.55
SORT1-203ENST00000471996 DHX29Q7Z478 1369 aaKnown RBP30.98■■■□□ 2.55
SORT1-203ENST00000471996 RTEL1-TNFRSF6BF6WH68 1400 aa30.98■■■□□ 2.55
SORT1-203ENST00000471996 MBD5Q9P267 1494 aa30.97■■■□□ 2.55
SORT1-203ENST00000471996 MTUS2Q5JR59 1369 aa30.96■■■□□ 2.55
SORT1-203ENST00000471996 ANKLE2Q86XL3 938 aa30.95■■■□□ 2.55
SORT1-203ENST00000471996 POLR1AO95602 1720 aaPredicted RBP30.93■■■□□ 2.54
SORT1-203ENST00000471996 PZPP20742 1482 aa30.92■■■□□ 2.54
SORT1-203ENST00000471996 KIF3BO15066 747 aa30.91■■■□□ 2.54
SORT1-203ENST00000471996 THEMISQ8N1K5 641 aaPredicted RBP30.91■■■□□ 2.54
SORT1-203ENST00000471996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.91■■■□□ 2.54
SORT1-203ENST00000471996 PHF23Q9BUL5 403 aaPredicted RBP30.9■■■□□ 2.54
SORT1-203ENST00000471996 VWDEQ8N2E2 1590 aa30.89■■■□□ 2.54
SORT1-203ENST00000471996 WASHC2CQ9Y4E1 1318 aa30.86■■■□□ 2.53
SORT1-203ENST00000471996 KDM5DQ9BY66 1539 aa30.86■■■□□ 2.53
SORT1-203ENST00000471996 FAM135AQ9P2D6 1515 aa30.86■■■□□ 2.53
SORT1-203ENST00000471996 TIAM1Q13009 1591 aa30.86■■■□□ 2.53
SORT1-203ENST00000471996 MED14O60244 1454 aa30.85■■■□□ 2.53
SORT1-203ENST00000471996 MIA2Q96PC5 1412 aa30.85■■■□□ 2.53
SORT1-203ENST00000471996 ALKQ9UM73 1620 aa30.84■■■□□ 2.53
SORT1-203ENST00000471996 NPHP4O75161 1426 aaPredicted RBP30.84■■■□□ 2.53
SORT1-203ENST00000471996 NLRP1Q9C000 1473 aa30.83■■■□□ 2.53
SORT1-203ENST00000471996 UGGT1Q9NYU2 1555 aa30.8■■■□□ 2.52
SORT1-203ENST00000471996 DEPDC5O75140 1603 aa30.79■■■□□ 2.52
SORT1-203ENST00000471996 CEP162Q5TB80 1403 aa30.77■■■□□ 2.52
SORT1-203ENST00000471996 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.52
SORT1-203ENST00000471996 EHBP1L1Q8N3D4 1523 aa30.76■■■□□ 2.51
SORT1-203ENST00000471996 RSPH4AQ5TD94 716 aa30.75■■■□□ 2.51
SORT1-203ENST00000471996 LRRC7Q96NW7 1537 aa30.72■■■□□ 2.51
SORT1-203ENST00000471996 SENP3Q9H4L4 574 aaPredicted RBP30.7■■■□□ 2.51
SORT1-203ENST00000471996 IQGAP1P46940 1657 aa30.69■■■□□ 2.5
SORT1-203ENST00000471996 CAMSAP2Q08AD1 1489 aa30.67■■■□□ 2.5
SORT1-203ENST00000471996 STRCP1A6NGW2 1772 aa30.64■■■□□ 2.49
SORT1-203ENST00000471996 RNF17Q9BXT8 1623 aaKnown RBP30.63■■■□□ 2.49
SORT1-203ENST00000471996 TSPY4P0CV99 314 aa30.62■■■□□ 2.49
SORT1-203ENST00000471996 TSPY10P0CW01 314 aa30.62■■■□□ 2.49
SORT1-203ENST00000471996 SYNMO15061 1565 aa30.62■■■□□ 2.49
SORT1-203ENST00000471996 RGS17Q9UGC6 210 aaPredicted RBP30.61■■■□□ 2.49
SORT1-203ENST00000471996 NCOA2Q15596 1464 aa30.6■■■□□ 2.49
SORT1-203ENST00000471996 ABCC3O15438 1527 aa30.57■■■□□ 2.49
SORT1-203ENST00000471996 ARHGEF5Q12774 1597 aa30.57■■■□□ 2.48
SORT1-203ENST00000471996 ERVK-7P63135 1459 aa30.57■■■□□ 2.48
SORT1-203ENST00000471996 SCAF11Q99590 1463 aaKnown RBP30.51■■■□□ 2.48
SORT1-203ENST00000471996 ZC3H13Q5T200 1668 aaKnown RBP30.51■■■□□ 2.47
SORT1-203ENST00000471996 LTKP29376 864 aa30.49■■■□□ 2.47
SORT1-203ENST00000471996 TXNDC2Q86VQ3 553 aa30.47■■■□□ 2.47
SORT1-203ENST00000471996 ARHGAP23Q9P227 1491 aa30.45■■■□□ 2.47
SORT1-203ENST00000471996 UBR1Q8IWV7 1749 aa30.45■■■□□ 2.47
SORT1-203ENST00000471996 FAM135BQ49AJ0 1406 aa30.43■■■□□ 2.46
SORT1-203ENST00000471996 MAST1Q9Y2H9 1570 aa30.43■■■□□ 2.46
SORT1-203ENST00000471996 SLIT1O75093 1534 aa30.42■■■□□ 2.46
SORT1-203ENST00000471996 EIF2AK4Q9P2K8 1649 aaKnown RBP30.42■■■□□ 2.46
SORT1-203ENST00000471996 MROH1Q8NDA8 1641 aa30.41■■■□□ 2.46
SORT1-203ENST00000471996 POTEAQ6S8J7 498 aa30.39■■■□□ 2.46
SORT1-203ENST00000471996 EID1Q9Y6B2 187 aa30.39■■■□□ 2.46
SORT1-203ENST00000471996 ARHGAP31Q2M1Z3 1444 aa30.35■■■□□ 2.45
SORT1-203ENST00000471996 XIRP1Q702N8 1843 aaKnown RBP30.35■■■□□ 2.45
SORT1-203ENST00000471996 CEP152O94986 1710 aa30.33■■■□□ 2.45
SORT1-203ENST00000471996 TMEM94Q12767 1356 aa30.31■■■□□ 2.44
SORT1-203ENST00000471996 TMEM2Q9UHN6 1383 aa30.31■■■□□ 2.44
SORT1-203ENST00000471996 DUOX2Q9NRD8 1548 aa30.3■■■□□ 2.44
SORT1-203ENST00000471996 CFAP65Q6ZU64 1925 aaKnown RBP30.29■■■□□ 2.44
SORT1-203ENST00000471996 LRRC9Q6ZRR7 1453 aa30.28■■■□□ 2.44
SORT1-203ENST00000471996 KCNA6P17658 529 aa30.27■■■□□ 2.44
SORT1-203ENST00000471996 STAG3Q9UJ98 1225 aa30.25■■■□□ 2.43
SORT1-203ENST00000471996 PRDM15P57071 1507 aaPredicted RBP30.24■■■□□ 2.43
SORT1-203ENST00000471996 MYOM3Q5VTT5 1437 aa30.23■■■□□ 2.43
SORT1-203ENST00000471996 PROSER2Q86WR7 435 aaPredicted RBP30.23■■■□□ 2.43
SORT1-203ENST00000471996 PIK3C2BO00750 1634 aa30.22■■■□□ 2.43
SORT1-203ENST00000471996 KIF15Q9NS87 1388 aa30.21■■■□□ 2.43
SORT1-203ENST00000471996 MAP3K1Q13233 1512 aa30.21■■■□□ 2.43
SORT1-203ENST00000471996 ROBO1Q9Y6N7 1651 aa30.2■■■□□ 2.43
SORT1-203ENST00000471996 SLC26A8Q96RN1 970 aa30.2■■■□□ 2.43
SORT1-203ENST00000471996 ERBINQ96RT1 1412 aa30.2■■■□□ 2.42
SORT1-203ENST00000471996 RBM33Q96EV2 1170 aaKnown RBP30.19■■■□□ 2.42
SORT1-203ENST00000471996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.19■■■□□ 2.42
SORT1-203ENST00000471996 IDI1Q13907 227 aa30.18■■■□□ 2.42
SORT1-203ENST00000471996 EFCAB6Q5THR3 1501 aa30.17■■■□□ 2.42
SORT1-203ENST00000471996 KANK4Q5T7N3 995 aaPredicted RBP30.16■■■□□ 2.42
SORT1-203ENST00000471996 RRP7BPQ9NSQ0 103 aa30.16■■■□□ 2.42
SORT1-203ENST00000471996 TET3O43151 1660 aa30.16■■■□□ 2.42
SORT1-203ENST00000471996 KANK1Q14678 1352 aa30.14■■■□□ 2.41
SORT1-203ENST00000471996 KDM5AP29375 1690 aaKnown RBP30.13■■■□□ 2.41
SORT1-203ENST00000471996 VPS8Q8N3P4 1428 aa30.12■■■□□ 2.41
SORT1-203ENST00000471996 NKTRP30414 1462 aaKnown RBP30.12■■■□□ 2.41
SORT1-203ENST00000471996 SLAIN2Q9P270 581 aa30.11■■■□□ 2.41
SORT1-203ENST00000471996 MSH6P52701 1360 aa30.11■■■□□ 2.41
SORT1-203ENST00000471996 JCADQ9P266 1359 aa30.11■■■□□ 2.41
SORT1-203ENST00000471996 ABCC5O15440 1437 aa30.1■■■□□ 2.41
SORT1-203ENST00000471996 NWD1Q149M9 1564 aa30.07■■■□□ 2.4
SORT1-203ENST00000471996 LMTK2Q8IWU2 1503 aa30.06■■■□□ 2.4
SORT1-203ENST00000471996 SETD1AO15047 1707 aaKnown RBP30.05■■■□□ 2.4
SORT1-203ENST00000471996 BCANQ96GW7 911 aa30.03■■■□□ 2.4
SORT1-203ENST00000471996 NOS1P29475 1434 aa30.03■■■□□ 2.4
SORT1-203ENST00000471996 PHLPP1O60346 1717 aa30.02■■■□□ 2.4
SORT1-203ENST00000471996 SLC52A1Q9NWF4 448 aa30.01■■■□□ 2.39
SORT1-203ENST00000471996 ADGRB3O60242 1522 aa30.01■■■□□ 2.39
SORT1-203ENST00000471996 CROCC2H7BZ55 1655 aa29.99■■■□□ 2.39
SORT1-203ENST00000471996 DAPK1P53355 1430 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms