RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 UNC13BO14795 1591 aa28.41■■■□□ 2.14
PSPC1-203ENST00000471658 AGLP35573 1532 aa28.41■■■□□ 2.14
PSPC1-203ENST00000471658 ARID4BQ4LE39 1312 aaPredicted RBP28.41■■■□□ 2.14
PSPC1-203ENST00000471658 MLECQ14165 292 aa28.4■■■□□ 2.14
PSPC1-203ENST00000471658 MROH1Q8NDA8 1641 aa28.39■■■□□ 2.14
PSPC1-203ENST00000471658 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
PSPC1-203ENST00000471658 BCORL1Q5H9F3 1711 aa28.39■■■□□ 2.13
PSPC1-203ENST00000471658 DEPDC5O75140 1603 aa28.39■■■□□ 2.13
PSPC1-203ENST00000471658 MPHOSPH9Q99550 1183 aa28.38■■■□□ 2.13
PSPC1-203ENST00000471658 PZPP20742 1482 aa28.38■■■□□ 2.13
PSPC1-203ENST00000471658 RNF17Q9BXT8 1623 aaKnown RBP28.37■■■□□ 2.13
PSPC1-203ENST00000471658 ACIN1Q9UKV3 1341 aaKnown RBP28.36■■■□□ 2.13
PSPC1-203ENST00000471658 SLC4A1APQ9BWU0 796 aaKnown RBP28.35■■■□□ 2.13
PSPC1-203ENST00000471658 KDM5DQ9BY66 1539 aa28.34■■■□□ 2.13
PSPC1-203ENST00000471658 PRDM15P57071 1507 aaPredicted RBP28.33■■■□□ 2.13
PSPC1-203ENST00000471658 KANK1Q14678 1352 aa28.32■■■□□ 2.12
PSPC1-203ENST00000471658 FAM135AQ9P2D6 1515 aa28.31■■■□□ 2.12
PSPC1-203ENST00000471658 VWDEQ8N2E2 1590 aa28.3■■■□□ 2.12
PSPC1-203ENST00000471658 FOXD1Q16676 465 aa28.3■■■□□ 2.12
PSPC1-203ENST00000471658 CCER1Q8TC90 406 aaPredicted RBP28.3■■■□□ 2.12
PSPC1-203ENST00000471658 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
PSPC1-203ENST00000471658 WASHC2CQ9Y4E1 1318 aa28.28■■■□□ 2.12
PSPC1-203ENST00000471658 PKD2Q13563 968 aa28.28■■■□□ 2.12
PSPC1-203ENST00000471658 ABCC3O15438 1527 aa28.23■■■□□ 2.11
PSPC1-203ENST00000471658 CEP152O94986 1710 aa28.23■■■□□ 2.11
PSPC1-203ENST00000471658 PPP6R1Q9UPN7 881 aa28.21■■■□□ 2.11
PSPC1-203ENST00000471658 LMTK2Q8IWU2 1503 aa28.19■■■□□ 2.1
PSPC1-203ENST00000471658 TET3O43151 1660 aa28.17■■■□□ 2.1
PSPC1-203ENST00000471658 ESF1Q9H501 851 aaKnown RBP28.14■■■□□ 2.1
PSPC1-203ENST00000471658 CLTCQ00610 1675 aaKnown RBP28.14■■■□□ 2.1
PSPC1-203ENST00000471658 E9PCH4 1651 aa28.14■■■□□ 2.09
PSPC1-203ENST00000471658 EFCAB6Q5THR3 1501 aa28.13■■■□□ 2.09
PSPC1-203ENST00000471658 ZC3H13Q5T200 1668 aaKnown RBP28.12■■■□□ 2.09
PSPC1-203ENST00000471658 CAMSAP1Q5T5Y3 1602 aa28.12■■■□□ 2.09
PSPC1-203ENST00000471658 NPATQ14207 1427 aa28.11■■■□□ 2.09
PSPC1-203ENST00000471658 ANKRD30BQ9BXX2 1392 aa28.1■■■□□ 2.09
PSPC1-203ENST00000471658 SIN3AQ96ST3 1273 aa28.1■■■□□ 2.09
PSPC1-203ENST00000471658 ZMYM3Q14202 1370 aa28.08■■■□□ 2.09
PSPC1-203ENST00000471658 PLA2R1Q13018 1463 aa28.07■■■□□ 2.08
PSPC1-203ENST00000471658 ARHGAP31Q2M1Z3 1444 aa28.06■■■□□ 2.08
PSPC1-203ENST00000471658 FBXO31Q5XUX0 539 aaPredicted RBP28.06■■■□□ 2.08
PSPC1-203ENST00000471658 ADAMTSL3P82987 1691 aa28.05■■■□□ 2.08
PSPC1-203ENST00000471658 FER1L4A9Z1Z3 1794 aa28.04■■■□□ 2.08
PSPC1-203ENST00000471658 MADDQ8WXG6 1647 aa28.04■■■□□ 2.08
PSPC1-203ENST00000471658 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
PSPC1-203ENST00000471658 CEBPAP49715 358 aaPredicted RBP28.03■■■□□ 2.08
PSPC1-203ENST00000471658 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
PSPC1-203ENST00000471658 CFAP65Q6ZU64 1925 aaKnown RBP28.03■■■□□ 2.08
PSPC1-203ENST00000471658 NEUROD1Q13562 356 aa28.03■■■□□ 2.08
PSPC1-203ENST00000471658 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
PSPC1-203ENST00000471658 PTPRTO14522 1441 aa28.01■■■□□ 2.07
PSPC1-203ENST00000471658 RPRD2Q5VT52 1461 aaKnown RBP28.01■■■□□ 2.07
PSPC1-203ENST00000471658 RIMS1Q86UR5 1692 aaKnown RBP27.97■■■□□ 2.07
PSPC1-203ENST00000471658 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
PSPC1-203ENST00000471658 NOS1P29475 1434 aa27.97■■■□□ 2.07
PSPC1-203ENST00000471658 SPHKAPQ2M3C7 1700 aa27.96■■■□□ 2.07
PSPC1-203ENST00000471658 ERVK-7P63135 1459 aa27.94■■■□□ 2.06
PSPC1-203ENST00000471658 PREX1Q8TCU6 1659 aa27.94■■■□□ 2.06
PSPC1-203ENST00000471658 TRPM2O94759 1503 aa27.94■■■□□ 2.06
PSPC1-203ENST00000471658 UGGT1Q9NYU2 1555 aa27.93■■■□□ 2.06
PSPC1-203ENST00000471658 C3P01024 1663 aa27.93■■■□□ 2.06
PSPC1-203ENST00000471658 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
PSPC1-203ENST00000471658 SYNMO15061 1565 aa27.92■■■□□ 2.06
PSPC1-203ENST00000471658 CCDC144AA2RUR9 1427 aa27.91■■■□□ 2.06
PSPC1-203ENST00000471658 SPATA31D1Q6ZQQ2 1576 aa27.89■■■□□ 2.06
PSPC1-203ENST00000471658 CLTCL1P53675 1640 aa27.88■■■□□ 2.05
PSPC1-203ENST00000471658 IDI1Q13907 227 aa27.86■■■□□ 2.05
PSPC1-203ENST00000471658 PTPRMP28827 1452 aa27.85■■■□□ 2.05
PSPC1-203ENST00000471658 TNRQ92752 1358 aa27.84■■■□□ 2.05
PSPC1-203ENST00000471658 SLC52A1Q9NWF4 448 aa27.81■■■□□ 2.04
PSPC1-203ENST00000471658 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
PSPC1-203ENST00000471658 RGL3Q3MIN7 710 aa27.81■■■□□ 2.04
PSPC1-203ENST00000471658 PIK3C2BO00750 1634 aa27.8■■■□□ 2.04
PSPC1-203ENST00000471658 TONSLQ96HA7 1378 aa27.77■■■□□ 2.04
PSPC1-203ENST00000471658 L3MBTL2Q969R5 705 aa27.76■■■□□ 2.03
PSPC1-203ENST00000471658 SPATA31E1Q6ZUB1 1445 aa27.76■■■□□ 2.03
PSPC1-203ENST00000471658 KIF1BO60333 1816 aa27.71■■■□□ 2.03
PSPC1-203ENST00000471658 ZEB1P37275 1124 aaPredicted RBP27.7■■■□□ 2.03
PSPC1-203ENST00000471658 STAG3Q9UJ98 1225 aa27.7■■■□□ 2.02
PSPC1-203ENST00000471658 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.02
PSPC1-203ENST00000471658 ADGRB3O60242 1522 aa27.69■■■□□ 2.02
PSPC1-203ENST00000471658 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
PSPC1-203ENST00000471658 TMEM131LA2VDJ0 1609 aa27.68■■■□□ 2.02
PSPC1-203ENST00000471658 KDM2AQ9Y2K7 1162 aa27.67■■■□□ 2.02
PSPC1-203ENST00000471658 NLRP1Q9C000 1473 aa27.67■■■□□ 2.02
PSPC1-203ENST00000471658 DCAF11Q8TEB1 546 aa27.67■■■□□ 2.02
PSPC1-203ENST00000471658 MYO3AQ8NEV4 1616 aa27.65■■■□□ 2.02
PSPC1-203ENST00000471658 A2ML1A8K2U0 1454 aa27.64■■■□□ 2.02
PSPC1-203ENST00000471658 MYO5BQ9ULV0 1848 aa27.64■■■□□ 2.01
PSPC1-203ENST00000471658 PPP1R15AO75807 674 aaPredicted RBP27.63■■■□□ 2.01
PSPC1-203ENST00000471658 NEURL4Q96JN8 1562 aa27.62■■■□□ 2.01
PSPC1-203ENST00000471658 NUTM2DQ5VT03 806 aaPredicted RBP27.61■■■□□ 2.01
PSPC1-203ENST00000471658 SETD1BQ9UPS6 1966 aaKnown RBP27.6■■■□□ 2.01
PSPC1-203ENST00000471658 UBR1Q8IWV7 1749 aa27.59■■■□□ 2.01
PSPC1-203ENST00000471658 CEP170BQ9Y4F5 1589 aaPredicted RBP27.57■■■□□ 2
PSPC1-203ENST00000471658 NBPF8Q3BBV2 869 aa27.56■■■□□ 2
PSPC1-203ENST00000471658 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
PSPC1-203ENST00000471658 UHRF1BP1Q6BDS2 1440 aa27.55■■■□□ 2
PSPC1-203ENST00000471658 NEXMIFQ5QGS0 1516 aa27.54■■■□□ 2
PSPC1-203ENST00000471658 ADGRF5Q8IZF2 1346 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms