RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 CLTCQ00610 1675 aaKnown RBP38.26■■■■□ 3.71
COL15A1-203ENST00000471477 ESF1Q9H501 851 aaKnown RBP38.24■■■■□ 3.71
COL15A1-203ENST00000471477 MROH1Q8NDA8 1641 aa38.22■■■■□ 3.71
COL15A1-203ENST00000471477 CNTLNQ9NXG0 1405 aa38.21■■■■□ 3.71
COL15A1-203ENST00000471477 MROH2AA6NES4 1674 aa38.21■■■■□ 3.71
COL15A1-203ENST00000471477 ANKRD50Q9ULJ7 1429 aa38.2■■■■□ 3.71
COL15A1-203ENST00000471477 DEPDC5O75140 1603 aa38.18■■■■□ 3.7
COL15A1-203ENST00000471477 C3P01024 1663 aa38.18■■■■□ 3.7
COL15A1-203ENST00000471477 PPP6R1Q9UPN7 881 aa38.18■■■■□ 3.7
COL15A1-203ENST00000471477 KDM5DQ9BY66 1539 aa38.17■■■■□ 3.7
COL15A1-203ENST00000471477 PLPPR3Q6T4P5 718 aa38.16■■■■□ 3.7
COL15A1-203ENST00000471477 FAM135AQ9P2D6 1515 aa38.16■■■■□ 3.7
COL15A1-203ENST00000471477 PRDM15P57071 1507 aaPredicted RBP38.14■■■■□ 3.7
COL15A1-203ENST00000471477 GCC2Q8IWJ2 1684 aa38.12■■■■□ 3.69
COL15A1-203ENST00000471477 ZC3H13Q5T200 1668 aaKnown RBP38.11■■■■□ 3.69
COL15A1-203ENST00000471477 CEP152O94986 1710 aa38.11■■■■□ 3.69
COL15A1-203ENST00000471477 CEBPAP49715 358 aaPredicted RBP38.1■■■■□ 3.69
COL15A1-203ENST00000471477 WASHC2CQ9Y4E1 1318 aa38.08■■■■□ 3.69
COL15A1-203ENST00000471477 ABCC3O15438 1527 aa38.08■■■■□ 3.69
COL15A1-203ENST00000471477 ZMYM3Q14202 1370 aa38.07■■■■□ 3.68
COL15A1-203ENST00000471477 NAIPQ13075 1403 aa38.05■■■■□ 3.68
COL15A1-203ENST00000471477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.04■■■■□ 3.68
COL15A1-203ENST00000471477 HFM1A2PYH4 1435 aa38.03■■■■□ 3.68
COL15A1-203ENST00000471477 UNC13BO14795 1591 aa38.03■■■■□ 3.68
COL15A1-203ENST00000471477 VWDEQ8N2E2 1590 aa38■■■■□ 3.67
COL15A1-203ENST00000471477 CAMSAP1Q5T5Y3 1602 aa37.99■■■■□ 3.67
COL15A1-203ENST00000471477 KANK1Q14678 1352 aa37.99■■■■□ 3.67
COL15A1-203ENST00000471477 SETD1BQ9UPS6 1966 aaKnown RBP37.93■■■■□ 3.66
COL15A1-203ENST00000471477 PZPP20742 1482 aa37.92■■■■□ 3.66
COL15A1-203ENST00000471477 LMTK2Q8IWU2 1503 aa37.91■■■■□ 3.66
COL15A1-203ENST00000471477 PREX1Q8TCU6 1659 aa37.89■■■■□ 3.66
COL15A1-203ENST00000471477 NPATQ14207 1427 aa37.89■■■■□ 3.66
COL15A1-203ENST00000471477 CFAP65Q6ZU64 1925 aaKnown RBP37.87■■■■□ 3.65
COL15A1-203ENST00000471477 IQGAP3Q86VI3 1631 aa37.87■■■■□ 3.65
COL15A1-203ENST00000471477 EFCAB6Q5THR3 1501 aa37.83■■■■□ 3.65
COL15A1-203ENST00000471477 TET3O43151 1660 aa37.83■■■■□ 3.65
COL15A1-203ENST00000471477 FBXO31Q5XUX0 539 aaPredicted RBP37.82■■■■□ 3.64
COL15A1-203ENST00000471477 NUP155O75694 1391 aa37.82■■■■□ 3.64
COL15A1-203ENST00000471477 ARHGAP31Q2M1Z3 1444 aa37.81■■■■□ 3.64
COL15A1-203ENST00000471477 LMTK3Q96Q04 1460 aa37.8■■■■□ 3.64
COL15A1-203ENST00000471477 MYO3AQ8NEV4 1616 aa37.78■■■■□ 3.64
COL15A1-203ENST00000471477 UHRF1BP1Q6BDS2 1440 aa37.77■■■■□ 3.64
COL15A1-203ENST00000471477 SPATA31D1Q6ZQQ2 1576 aa37.77■■■■□ 3.64
COL15A1-203ENST00000471477 ERVK-7P63135 1459 aa37.76■■■■□ 3.64
COL15A1-203ENST00000471477 SETD5Q9C0A6 1442 aa37.75■■■■□ 3.63
COL15A1-203ENST00000471477 TNRQ92752 1358 aa37.73■■■■□ 3.63
COL15A1-203ENST00000471477 E9PCH4 1651 aa37.71■■■■□ 3.63
COL15A1-203ENST00000471477 ZNF142P52746 1687 aaPredicted RBP37.69■■■■□ 3.62
COL15A1-203ENST00000471477 TRIM52Q96A61 297 aa37.68■■■■□ 3.62
COL15A1-203ENST00000471477 RPRD2Q5VT52 1461 aaKnown RBP37.67■■■■□ 3.62
COL15A1-203ENST00000471477 CEP170BQ9Y4F5 1589 aaPredicted RBP37.65■■■■□ 3.62
COL15A1-203ENST00000471477 RAB3GAP2Q9H2M9 1393 aa37.63■■■■□ 3.62
COL15A1-203ENST00000471477 HSPA2P54652 639 aa37.61■■■■□ 3.61
COL15A1-203ENST00000471477 SYNMO15061 1565 aa37.6■■■■□ 3.61
COL15A1-203ENST00000471477 NLRP1Q9C000 1473 aa37.6■■■■□ 3.61
COL15A1-203ENST00000471477 NOS1P29475 1434 aa37.59■■■■□ 3.61
COL15A1-203ENST00000471477 A2ML1A8K2U0 1454 aa37.59■■■■□ 3.61
COL15A1-203ENST00000471477 TRIM26Q12899 539 aaPredicted RBP37.54■■■■□ 3.6
COL15A1-203ENST00000471477 SPHKAPQ2M3C7 1700 aa37.51■■■■□ 3.6
COL15A1-203ENST00000471477 SLC4A1APQ9BWU0 796 aaKnown RBP37.51■■■■□ 3.59
COL15A1-203ENST00000471477 ACIN1Q9UKV3 1341 aaKnown RBP37.5■■■■□ 3.59
COL15A1-203ENST00000471477 UGGT1Q9NYU2 1555 aa37.48■■■■□ 3.59
COL15A1-203ENST00000471477 PIK3C2BO00750 1634 aa37.48■■■■□ 3.59
COL15A1-203ENST00000471477 UBR1Q8IWV7 1749 aa37.46■■■■□ 3.59
COL15A1-203ENST00000471477 PKD2Q13563 968 aa37.45■■■■□ 3.59
COL15A1-203ENST00000471477 STRCQ7RTU9 1775 aa37.41■■■■□ 3.58
COL15A1-203ENST00000471477 HRCP23327 699 aa37.41■■■■□ 3.58
COL15A1-203ENST00000471477 IDI1Q13907 227 aa37.41■■■■□ 3.58
COL15A1-203ENST00000471477 MPHOSPH9Q99550 1183 aa37.41■■■■□ 3.58
COL15A1-203ENST00000471477 PTPRTO14522 1441 aa37.39■■■■□ 3.58
COL15A1-203ENST00000471477 SLC52A1Q9NWF4 448 aa37.39■■■■□ 3.58
COL15A1-203ENST00000471477 KDM5AP29375 1690 aaKnown RBP37.38■■■■□ 3.57
COL15A1-203ENST00000471477 PLA2R1Q13018 1463 aa37.36■■■■□ 3.57
COL15A1-203ENST00000471477 TRPM2O94759 1503 aa37.36■■■■□ 3.57
COL15A1-203ENST00000471477 ADGRB3O60242 1522 aa37.35■■■■□ 3.57
COL15A1-203ENST00000471477 THEMISQ8N1K5 641 aaPredicted RBP37.35■■■■□ 3.57
COL15A1-203ENST00000471477 MYO5BQ9ULV0 1848 aa37.34■■■■□ 3.57
COL15A1-203ENST00000471477 FOXD1Q16676 465 aa37.33■■■■□ 3.57
COL15A1-203ENST00000471477 STAG3Q9UJ98 1225 aa37.31■■■■□ 3.56
COL15A1-203ENST00000471477 POLR1AO95602 1720 aaPredicted RBP37.3■■■■□ 3.56
COL15A1-203ENST00000471477 CLTCL1P53675 1640 aa37.3■■■■□ 3.56
COL15A1-203ENST00000471477 TMEM131LA2VDJ0 1609 aa37.28■■■■□ 3.56
COL15A1-203ENST00000471477 DMRT2Q9Y5R5 561 aa37.24■■■■□ 3.55
COL15A1-203ENST00000471477 NCKAP5LQ9HCH0 1330 aa37.24■■■■□ 3.55
COL15A1-203ENST00000471477 SLIT1O75093 1534 aa37.23■■■■□ 3.55
COL15A1-203ENST00000471477 ARHGAP23Q9P227 1491 aa37.22■■■■□ 3.55
COL15A1-203ENST00000471477 KIF1BO60333 1816 aa37.21■■■■□ 3.55
COL15A1-203ENST00000471477 CHGAP10645 457 aaKnown RBP37.2■■■■□ 3.55
COL15A1-203ENST00000471477 NEURL4Q96JN8 1562 aa37.19■■■■□ 3.54
COL15A1-203ENST00000471477 TMEM2Q9UHN6 1383 aa37.18■■■■□ 3.54
COL15A1-203ENST00000471477 ANKLE2Q86XL3 938 aa37.17■■■■□ 3.54
COL15A1-203ENST00000471477 SCAF11Q99590 1463 aaKnown RBP37.12■■■■□ 3.53
COL15A1-203ENST00000471477 CCDC144AA2RUR9 1427 aa37.12■■■■□ 3.53
COL15A1-203ENST00000471477 LTKP29376 864 aa37.09■■■■□ 3.53
COL15A1-203ENST00000471477 TXNDC2Q86VQ3 553 aa37.09■■■■□ 3.53
COL15A1-203ENST00000471477 MED14O60244 1454 aa37.08■■■■□ 3.53
COL15A1-203ENST00000471477 IQGAP1P46940 1657 aa37.08■■■■□ 3.53
COL15A1-203ENST00000471477 ZFYVE9O95405 1425 aa37.07■■■■□ 3.53
COL15A1-203ENST00000471477 EID1Q9Y6B2 187 aa37.07■■■■□ 3.52
COL15A1-203ENST00000471477 RIMS2Q9UQ26 1411 aa37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms