RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
VPS72-204ENST00000471423 CNTLNQ9NXG0 1405 aa27.03■■□□□ 1.92
VPS72-204ENST00000471423 CLTCQ00610 1675 aaKnown RBP27.02■■□□□ 1.92
VPS72-204ENST00000471423 ROCK1Q13464 1354 aa27■■□□□ 1.91
VPS72-204ENST00000471423 MROH2AA6NES4 1674 aa27■■□□□ 1.91
VPS72-204ENST00000471423 C3P01024 1663 aa26.99■■□□□ 1.91
VPS72-204ENST00000471423 MROH1Q8NDA8 1641 aa26.98■■□□□ 1.91
VPS72-204ENST00000471423 PPP6R1Q9UPN7 881 aa26.98■■□□□ 1.91
VPS72-204ENST00000471423 KDM5DQ9BY66 1539 aa26.98■■□□□ 1.91
VPS72-204ENST00000471423 CEBPAP49715 358 aaPredicted RBP26.97■■□□□ 1.91
VPS72-204ENST00000471423 FAM135AQ9P2D6 1515 aa26.96■■□□□ 1.91
VPS72-204ENST00000471423 ANKRD50Q9ULJ7 1429 aa26.94■■□□□ 1.9
VPS72-204ENST00000471423 PRDM15P57071 1507 aaPredicted RBP26.94■■□□□ 1.9
VPS72-204ENST00000471423 DEPDC5O75140 1603 aa26.94■■□□□ 1.9
VPS72-204ENST00000471423 ZMYM3Q14202 1370 aa26.93■■□□□ 1.9
VPS72-204ENST00000471423 WASHC2CQ9Y4E1 1318 aa26.91■■□□□ 1.9
VPS72-204ENST00000471423 ZC3H13Q5T200 1668 aaKnown RBP26.91■■□□□ 1.9
VPS72-204ENST00000471423 ABCC3O15438 1527 aa26.9■■□□□ 1.9
VPS72-204ENST00000471423 CEP152O94986 1710 aa26.87■■□□□ 1.89
VPS72-204ENST00000471423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.86■■□□□ 1.896e-7■■■■□ 25.4
VPS72-204ENST00000471423 CAMSAP1Q5T5Y3 1602 aa26.83■■□□□ 1.88
VPS72-204ENST00000471423 GCC2Q8IWJ2 1684 aa26.82■■□□□ 1.88
VPS72-204ENST00000471423 PREX1Q8TCU6 1659 aa26.82■■□□□ 1.88
VPS72-204ENST00000471423 VWDEQ8N2E2 1590 aa26.82■■□□□ 1.88
VPS72-204ENST00000471423 KANK1Q14678 1352 aa26.82■■□□□ 1.88
VPS72-204ENST00000471423 NPATQ14207 1427 aa26.82■■□□□ 1.88
VPS72-204ENST00000471423 PZPP20742 1482 aa26.81■■□□□ 1.88
VPS72-204ENST00000471423 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
VPS72-204ENST00000471423 UNC13BO14795 1591 aa26.81■■□□□ 1.88
VPS72-204ENST00000471423 NAIPQ13075 1403 aa26.81■■□□□ 1.88
VPS72-204ENST00000471423 HFM1A2PYH4 1435 aa26.78■■□□□ 1.88
VPS72-204ENST00000471423 LMTK2Q8IWU2 1503 aa26.76■■□□□ 1.87
VPS72-204ENST00000471423 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
VPS72-204ENST00000471423 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
VPS72-204ENST00000471423 FBXO31Q5XUX0 539 aaPredicted RBP26.74■■□□□ 1.87
VPS72-204ENST00000471423 MYO3AQ8NEV4 1616 aa26.72■■□□□ 1.87
VPS72-204ENST00000471423 EFCAB6Q5THR3 1501 aa26.71■■□□□ 1.87
VPS72-204ENST00000471423 ARHGAP31Q2M1Z3 1444 aa26.71■■□□□ 1.87
VPS72-204ENST00000471423 TNRQ92752 1358 aa26.7■■□□□ 1.86
VPS72-204ENST00000471423 ERVK-7P63135 1459 aa26.69■■□□□ 1.86
VPS72-204ENST00000471423 IQGAP3Q86VI3 1631 aa26.69■■□□□ 1.86
VPS72-204ENST00000471423 SPATA31D1Q6ZQQ2 1576 aa26.68■■□□□ 1.86
VPS72-204ENST00000471423 TET3O43151 1660 aa26.67■■□□□ 1.86
VPS72-204ENST00000471423 HSPA2P54652 639 aa26.67■■□□□ 1.86
VPS72-204ENST00000471423 NUP155O75694 1391 aa26.67■■□□□ 1.86
VPS72-204ENST00000471423 ZNF142P52746 1687 aaPredicted RBP26.66■■□□□ 1.86
VPS72-204ENST00000471423 CEP170BQ9Y4F5 1589 aaPredicted RBP26.64■■□□□ 1.86
VPS72-204ENST00000471423 CFAP65Q6ZU64 1925 aaKnown RBP26.64■■□□□ 1.86
VPS72-204ENST00000471423 A2ML1A8K2U0 1454 aa26.6■■□□□ 1.85
VPS72-204ENST00000471423 RPRD2Q5VT52 1461 aaKnown RBP26.59■■□□□ 1.85
VPS72-204ENST00000471423 NLRP1Q9C000 1473 aa26.59■■□□□ 1.85
VPS72-204ENST00000471423 E9PCH4 1651 aa26.58■■□□□ 1.85
VPS72-204ENST00000471423 SYNMO15061 1565 aa26.55■■□□□ 1.84
VPS72-204ENST00000471423 NOS1P29475 1434 aa26.55■■□□□ 1.84
VPS72-204ENST00000471423 SETD5Q9C0A6 1442 aa26.55■■□□□ 1.84
VPS72-204ENST00000471423 TRIM52Q96A61 297 aa26.54■■□□□ 1.84
VPS72-204ENST00000471423 UGGT1Q9NYU2 1555 aa26.51■■□□□ 1.83
VPS72-204ENST00000471423 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
VPS72-204ENST00000471423 STRCQ7RTU9 1775 aa26.48■■□□□ 1.83
VPS72-204ENST00000471423 PIK3C2BO00750 1634 aa26.47■■□□□ 1.83
VPS72-204ENST00000471423 PLA2R1Q13018 1463 aa26.46■■□□□ 1.83
VPS72-204ENST00000471423 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.83
VPS72-204ENST00000471423 SLC4A1APQ9BWU0 796 aaKnown RBP26.43■■□□□ 1.82
VPS72-204ENST00000471423 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
VPS72-204ENST00000471423 IDI1Q13907 227 aa26.41■■□□□ 1.82
VPS72-204ENST00000471423 THEMISQ8N1K5 641 aaPredicted RBP26.41■■□□□ 1.82
VPS72-204ENST00000471423 PKD2Q13563 968 aa26.4■■□□□ 1.82
VPS72-204ENST00000471423 SLC52A1Q9NWF4 448 aa26.4■■□□□ 1.82
VPS72-204ENST00000471423 ADGRB3O60242 1522 aa26.39■■□□□ 1.82
VPS72-204ENST00000471423 PTPRTO14522 1441 aa26.39■■□□□ 1.81
VPS72-204ENST00000471423 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
VPS72-204ENST00000471423 NCKAP5LQ9HCH0 1330 aa26.38■■□□□ 1.81
VPS72-204ENST00000471423 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
VPS72-204ENST00000471423 POLR1AO95602 1720 aaPredicted RBP26.36■■□□□ 1.81
VPS72-204ENST00000471423 STAG3Q9UJ98 1225 aa26.36■■□□□ 1.81
VPS72-204ENST00000471423 TRPM2O94759 1503 aa26.34■■□□□ 1.81
VPS72-204ENST00000471423 MPHOSPH9Q99550 1183 aa26.34■■□□□ 1.81
VPS72-204ENST00000471423 NEURL4Q96JN8 1562 aa26.33■■□□□ 1.8
VPS72-204ENST00000471423 SLIT1O75093 1534 aa26.32■■□□□ 1.8
VPS72-204ENST00000471423 ARHGAP23Q9P227 1491 aa26.31■■□□□ 1.8
VPS72-204ENST00000471423 FOXD1Q16676 465 aa26.31■■□□□ 1.8
VPS72-204ENST00000471423 DMRT2Q9Y5R5 561 aa26.31■■□□□ 1.8
VPS72-204ENST00000471423 TMEM131LA2VDJ0 1609 aa26.31■■□□□ 1.8
VPS72-204ENST00000471423 CLTCL1P53675 1640 aa26.31■■□□□ 1.8
VPS72-204ENST00000471423 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
VPS72-204ENST00000471423 ANKLE2Q86XL3 938 aa26.3■■□□□ 1.8
VPS72-204ENST00000471423 MYO5BQ9ULV0 1848 aa26.3■■□□□ 1.8
VPS72-204ENST00000471423 HRCP23327 699 aa26.29■■□□□ 1.8
VPS72-204ENST00000471423 TMEM2Q9UHN6 1383 aa26.29■■□□□ 1.8
VPS72-204ENST00000471423 CHGAP10645 457 aaKnown RBP26.27■■□□□ 1.8
VPS72-204ENST00000471423 SCAF11Q99590 1463 aaKnown RBP26.26■■□□□ 1.79
VPS72-204ENST00000471423 MED14O60244 1454 aa26.24■■□□□ 1.79
VPS72-204ENST00000471423 NPHP4O75161 1426 aaPredicted RBP26.22■■□□□ 1.79
VPS72-204ENST00000471423 LTKP29376 864 aa26.22■■□□□ 1.79
VPS72-204ENST00000471423 IQGAP1P46940 1657 aa26.22■■□□□ 1.79
VPS72-204ENST00000471423 TXNDC2Q86VQ3 553 aa26.21■■□□□ 1.79
VPS72-204ENST00000471423 EID1Q9Y6B2 187 aa26.21■■□□□ 1.79
VPS72-204ENST00000471423 ZFYVE9O95405 1425 aa26.2■■□□□ 1.78
VPS72-204ENST00000471423 RIMS2Q9UQ26 1411 aa26.19■■□□□ 1.78
VPS72-204ENST00000471423 KIF1BO60333 1816 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms