RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 UNC13BO14795 1591 aa17.93■□□□□ 0.46
HDLBP-234ENST00000471294 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
HDLBP-234ENST00000471294 KDM5DQ9BY66 1539 aa17.93■□□□□ 0.46
HDLBP-234ENST00000471294 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
HDLBP-234ENST00000471294 VWDEQ8N2E2 1590 aa17.88■□□□□ 0.45
HDLBP-234ENST00000471294 KIF3BO15066 747 aa17.87■□□□□ 0.45
HDLBP-234ENST00000471294 IQGAP3Q86VI3 1631 aa17.86■□□□□ 0.45
HDLBP-234ENST00000471294 KANK1Q14678 1352 aa17.85■□□□□ 0.45
HDLBP-234ENST00000471294 LMTK2Q8IWU2 1503 aa17.85■□□□□ 0.45
HDLBP-234ENST00000471294 MROH1Q8NDA8 1641 aa17.85■□□□□ 0.45
HDLBP-234ENST00000471294 NUP155O75694 1391 aa17.84■□□□□ 0.45
HDLBP-234ENST00000471294 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.44
HDLBP-234ENST00000471294 PZPP20742 1482 aa17.82■□□□□ 0.44
HDLBP-234ENST00000471294 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
HDLBP-234ENST00000471294 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
HDLBP-234ENST00000471294 TRIM52Q96A61 297 aa17.8■□□□□ 0.44
HDLBP-234ENST00000471294 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
HDLBP-234ENST00000471294 TET3O43151 1660 aa17.78■□□□□ 0.44
HDLBP-234ENST00000471294 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
HDLBP-234ENST00000471294 RPRD2Q5VT52 1461 aaKnown RBP17.77■□□□□ 0.44
HDLBP-234ENST00000471294 ARHGAP31Q2M1Z3 1444 aa17.77■□□□□ 0.44
HDLBP-234ENST00000471294 CNTLNQ9NXG0 1405 aa17.77■□□□□ 0.44
HDLBP-234ENST00000471294 ABCC3O15438 1527 aa17.77■□□□□ 0.43
HDLBP-234ENST00000471294 GGT6Q6P531 493 aa17.76■□□□□ 0.43
HDLBP-234ENST00000471294 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
HDLBP-234ENST00000471294 ARID4BQ4LE39 1312 aaPredicted RBP17.74■□□□□ 0.43
HDLBP-234ENST00000471294 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
HDLBP-234ENST00000471294 EFCAB6Q5THR3 1501 aa17.74■□□□□ 0.43
HDLBP-234ENST00000471294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.74■□□□□ 0.437e-11■■■□□ 15.2
HDLBP-234ENST00000471294 MROH2AA6NES4 1674 aa17.71■□□□□ 0.43
HDLBP-234ENST00000471294 CEP152O94986 1710 aa17.7■□□□□ 0.42
HDLBP-234ENST00000471294 CAMSAP1Q5T5Y3 1602 aa17.7■□□□□ 0.42
HDLBP-234ENST00000471294 PKD2Q13563 968 aa17.7■□□□□ 0.42
HDLBP-234ENST00000471294 ADAMTSL3P82987 1691 aa17.69■□□□□ 0.42
HDLBP-234ENST00000471294 PTPRTO14522 1441 aa17.68■□□□□ 0.42
HDLBP-234ENST00000471294 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
HDLBP-234ENST00000471294 E9PCH4 1651 aa17.67■□□□□ 0.42
HDLBP-234ENST00000471294 ANKRD30BQ9BXX2 1392 aa17.67■□□□□ 0.42
HDLBP-234ENST00000471294 NPATQ14207 1427 aa17.67■□□□□ 0.42
HDLBP-234ENST00000471294 CCER1Q8TC90 406 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-234ENST00000471294 CLTCQ00610 1675 aaKnown RBP17.66■□□□□ 0.42
HDLBP-234ENST00000471294 FER1L4A9Z1Z3 1794 aa17.66■□□□□ 0.42
HDLBP-234ENST00000471294 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
HDLBP-234ENST00000471294 MLECQ14165 292 aa17.64■□□□□ 0.41
HDLBP-234ENST00000471294 NOS1P29475 1434 aa17.64■□□□□ 0.41
HDLBP-234ENST00000471294 TRPM2O94759 1503 aa17.62■□□□□ 0.41
HDLBP-234ENST00000471294 SPHKAPQ2M3C7 1700 aa17.61■□□□□ 0.41
HDLBP-234ENST00000471294 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
HDLBP-234ENST00000471294 SPATA31D1Q6ZQQ2 1576 aa17.61■□□□□ 0.41
HDLBP-234ENST00000471294 MADDQ8WXG6 1647 aa17.6■□□□□ 0.41
HDLBP-234ENST00000471294 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
HDLBP-234ENST00000471294 ERVK-7P63135 1459 aa17.59■□□□□ 0.41
HDLBP-234ENST00000471294 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
HDLBP-234ENST00000471294 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.41
HDLBP-234ENST00000471294 SLC52A1Q9NWF4 448 aa17.58■□□□□ 0.4
HDLBP-234ENST00000471294 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
HDLBP-234ENST00000471294 C3P01024 1663 aa17.56■□□□□ 0.4
HDLBP-234ENST00000471294 FOXD1Q16676 465 aa17.56■□□□□ 0.4
HDLBP-234ENST00000471294 RIMS1Q86UR5 1692 aaKnown RBP17.55■□□□□ 0.4
HDLBP-234ENST00000471294 PIK3C2BO00750 1634 aa17.54■□□□□ 0.4
HDLBP-234ENST00000471294 SETD1BQ9UPS6 1966 aaKnown RBP17.53■□□□□ 0.4
HDLBP-234ENST00000471294 SYNMO15061 1565 aa17.53■□□□□ 0.4
HDLBP-234ENST00000471294 PTPRMP28827 1452 aa17.51■□□□□ 0.39
HDLBP-234ENST00000471294 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-234ENST00000471294 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
HDLBP-234ENST00000471294 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
HDLBP-234ENST00000471294 CFAP65Q6ZU64 1925 aaKnown RBP17.5■□□□□ 0.39
HDLBP-234ENST00000471294 TNRQ92752 1358 aa17.5■□□□□ 0.39
HDLBP-234ENST00000471294 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
HDLBP-234ENST00000471294 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-234ENST00000471294 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
HDLBP-234ENST00000471294 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
HDLBP-234ENST00000471294 KIF1BO60333 1816 aa17.47■□□□□ 0.39
HDLBP-234ENST00000471294 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
HDLBP-234ENST00000471294 ADGRB3O60242 1522 aa17.46■□□□□ 0.39
HDLBP-234ENST00000471294 KDM4FA0A1W2PPD8 638 aa17.45■□□□□ 0.38
HDLBP-234ENST00000471294 IDI1Q13907 227 aa17.45■□□□□ 0.38
HDLBP-234ENST00000471294 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
HDLBP-234ENST00000471294 TONSLQ96HA7 1378 aa17.43■□□□□ 0.38
HDLBP-234ENST00000471294 CEBPAP49715 358 aaPredicted RBP17.43■□□□□ 0.38
HDLBP-234ENST00000471294 UGGT1Q9NYU2 1555 aa17.42■□□□□ 0.38
HDLBP-234ENST00000471294 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
HDLBP-234ENST00000471294 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
HDLBP-234ENST00000471294 A2ML1A8K2U0 1454 aa17.41■□□□□ 0.38
HDLBP-234ENST00000471294 MYO3AQ8NEV4 1616 aa17.4■□□□□ 0.38
HDLBP-234ENST00000471294 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-234ENST00000471294 ZFYVE9O95405 1425 aa17.38■□□□□ 0.37
HDLBP-234ENST00000471294 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
HDLBP-234ENST00000471294 UBR1Q8IWV7 1749 aa17.37■□□□□ 0.37
HDLBP-234ENST00000471294 CEP170BQ9Y4F5 1589 aaPredicted RBP17.36■□□□□ 0.37
HDLBP-234ENST00000471294 UHRF1BP1Q6BDS2 1440 aa17.36■□□□□ 0.37
HDLBP-234ENST00000471294 MYOM2P54296 1465 aa17.36■□□□□ 0.37
HDLBP-234ENST00000471294 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
HDLBP-234ENST00000471294 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
HDLBP-234ENST00000471294 SLIT1O75093 1534 aa17.34■□□□□ 0.37
HDLBP-234ENST00000471294 PPP1R15AO75807 674 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-234ENST00000471294 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-234ENST00000471294 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
HDLBP-234ENST00000471294 ARHGAP23Q9P227 1491 aa17.33■□□□□ 0.37
HDLBP-234ENST00000471294 PPLO60437 1756 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms