RNA–Protein interactions for RNA: ENST00000470950.1

LDLRAP1-203, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-203ENST00000470950 FBXO31Q5XUX0 539 aaPredicted RBP21.91■■□□□ 1.1
LDLRAP1-203ENST00000470950 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
LDLRAP1-203ENST00000470950 TNRQ92752 1358 aa21.9■■□□□ 1.1
LDLRAP1-203ENST00000470950 POLR1AO95602 1720 aaPredicted RBP21.9■■□□□ 1.1
LDLRAP1-203ENST00000470950 MBD5Q9P267 1494 aa21.9■■□□□ 1.1
LDLRAP1-203ENST00000470950 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.1
LDLRAP1-203ENST00000470950 RTEL1-TNFRSF6BF6WH68 1400 aa21.89■■□□□ 1.09
LDLRAP1-203ENST00000470950 ANKLE2Q86XL3 938 aa21.87■■□□□ 1.09
LDLRAP1-203ENST00000470950 PZPP20742 1482 aa21.85■■□□□ 1.09
LDLRAP1-203ENST00000470950 KIF3BO15066 747 aa21.85■■□□□ 1.09
LDLRAP1-203ENST00000470950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.85■■□□□ 1.09
LDLRAP1-203ENST00000470950 TIAM1Q13009 1591 aa21.84■■□□□ 1.09
LDLRAP1-203ENST00000470950 VWDEQ8N2E2 1590 aa21.84■■□□□ 1.09
LDLRAP1-203ENST00000470950 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
LDLRAP1-203ENST00000470950 THEMISQ8N1K5 641 aaPredicted RBP21.83■■□□□ 1.09
LDLRAP1-203ENST00000470950 KDM5DQ9BY66 1539 aa21.83■■□□□ 1.09
LDLRAP1-203ENST00000470950 WASHC2CQ9Y4E1 1318 aa21.81■■□□□ 1.08
LDLRAP1-203ENST00000470950 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
LDLRAP1-203ENST00000470950 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
LDLRAP1-203ENST00000470950 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
LDLRAP1-203ENST00000470950 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
LDLRAP1-203ENST00000470950 MED14O60244 1454 aa21.8■■□□□ 1.08
LDLRAP1-203ENST00000470950 NLRP1Q9C000 1473 aa21.79■■□□□ 1.08
LDLRAP1-203ENST00000470950 UGGT1Q9NYU2 1555 aa21.78■■□□□ 1.08
LDLRAP1-203ENST00000470950 DEPDC5O75140 1603 aa21.77■■□□□ 1.08
LDLRAP1-203ENST00000470950 EHBP1L1Q8N3D4 1523 aa21.77■■□□□ 1.08
LDLRAP1-203ENST00000470950 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
LDLRAP1-203ENST00000470950 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
LDLRAP1-203ENST00000470950 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
LDLRAP1-203ENST00000470950 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
LDLRAP1-203ENST00000470950 IQGAP1P46940 1657 aa21.72■■□□□ 1.07
LDLRAP1-203ENST00000470950 LRRC7Q96NW7 1537 aa21.71■■□□□ 1.07
LDLRAP1-203ENST00000470950 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.06
LDLRAP1-203ENST00000470950 STRCP1A6NGW2 1772 aa21.69■■□□□ 1.06
LDLRAP1-203ENST00000470950 RNF17Q9BXT8 1623 aaKnown RBP21.66■■□□□ 1.06
LDLRAP1-203ENST00000470950 SYNMO15061 1565 aa21.65■■□□□ 1.06
LDLRAP1-203ENST00000470950 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
LDLRAP1-203ENST00000470950 TSPY4P0CV99 314 aa21.65■■□□□ 1.06
LDLRAP1-203ENST00000470950 TSPY10P0CW01 314 aa21.65■■□□□ 1.06
LDLRAP1-203ENST00000470950 ABCC3O15438 1527 aa21.63■■□□□ 1.05
LDLRAP1-203ENST00000470950 ARHGEF5Q12774 1597 aa21.62■■□□□ 1.05
LDLRAP1-203ENST00000470950 RGS17Q9UGC6 210 aaPredicted RBP21.62■■□□□ 1.05
LDLRAP1-203ENST00000470950 ERVK-7P63135 1459 aa21.61■■□□□ 1.05
LDLRAP1-203ENST00000470950 ZC3H13Q5T200 1668 aaKnown RBP21.6■■□□□ 1.05
LDLRAP1-203ENST00000470950 SCAF11Q99590 1463 aaKnown RBP21.57■■□□□ 1.04
LDLRAP1-203ENST00000470950 UBR1Q8IWV7 1749 aa21.55■■□□□ 1.04
LDLRAP1-203ENST00000470950 LTKP29376 864 aa21.55■■□□□ 1.04
LDLRAP1-203ENST00000470950 TXNDC2Q86VQ3 553 aa21.54■■□□□ 1.04
LDLRAP1-203ENST00000470950 EIF2AK4Q9P2K8 1649 aaKnown RBP21.53■■□□□ 1.04
LDLRAP1-203ENST00000470950 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
LDLRAP1-203ENST00000470950 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.04
LDLRAP1-203ENST00000470950 MROH1Q8NDA8 1641 aa21.52■■□□□ 1.04
LDLRAP1-203ENST00000470950 SLIT1O75093 1534 aa21.51■■□□□ 1.03
LDLRAP1-203ENST00000470950 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
LDLRAP1-203ENST00000470950 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
LDLRAP1-203ENST00000470950 CEP152O94986 1710 aa21.49■■□□□ 1.03
LDLRAP1-203ENST00000470950 FAM135BQ49AJ0 1406 aa21.49■■□□□ 1.03
LDLRAP1-203ENST00000470950 EID1Q9Y6B2 187 aa21.48■■□□□ 1.03
LDLRAP1-203ENST00000470950 POTEAQ6S8J7 498 aa21.47■■□□□ 1.03
LDLRAP1-203ENST00000470950 ARHGAP31Q2M1Z3 1444 aa21.45■■□□□ 1.02
LDLRAP1-203ENST00000470950 TMEM94Q12767 1356 aa21.43■■□□□ 1.02
LDLRAP1-203ENST00000470950 LRRC9Q6ZRR7 1453 aa21.43■■□□□ 1.02
LDLRAP1-203ENST00000470950 DUOX2Q9NRD8 1548 aa21.43■■□□□ 1.02
LDLRAP1-203ENST00000470950 TMEM2Q9UHN6 1383 aa21.42■■□□□ 1.02
LDLRAP1-203ENST00000470950 PRDM15P57071 1507 aaPredicted RBP21.39■■□□□ 1.02
LDLRAP1-203ENST00000470950 KCNA6P17658 529 aa21.39■■□□□ 1.01
LDLRAP1-203ENST00000470950 STAG3Q9UJ98 1225 aa21.39■■□□□ 1.01
LDLRAP1-203ENST00000470950 PIK3C2BO00750 1634 aa21.39■■□□□ 1.01
LDLRAP1-203ENST00000470950 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
LDLRAP1-203ENST00000470950 ROBO1Q9Y6N7 1651 aa21.37■■□□□ 1.01
LDLRAP1-203ENST00000470950 KIF15Q9NS87 1388 aa21.36■■□□□ 1.01
LDLRAP1-203ENST00000470950 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
LDLRAP1-203ENST00000470950 PROSER2Q86WR7 435 aaPredicted RBP21.36■■□□□ 1.01
LDLRAP1-203ENST00000470950 RBM33Q96EV2 1170 aaKnown RBP21.36■■□□□ 1.01
LDLRAP1-203ENST00000470950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.01
LDLRAP1-203ENST00000470950 ERBINQ96RT1 1412 aa21.35■■□□□ 1.01
LDLRAP1-203ENST00000470950 KANK4Q5T7N3 995 aaPredicted RBP21.34■■□□□ 1.01
LDLRAP1-203ENST00000470950 SLC26A8Q96RN1 970 aa21.34■■□□□ 1.01
LDLRAP1-203ENST00000470950 EFCAB6Q5THR3 1501 aa21.34■■□□□ 1.01
LDLRAP1-203ENST00000470950 IDI1Q13907 227 aa21.33■■□□□ 1.01
LDLRAP1-203ENST00000470950 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1.01
LDLRAP1-203ENST00000470950 TET3O43151 1660 aa21.32■■□□□ 1
LDLRAP1-203ENST00000470950 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
LDLRAP1-203ENST00000470950 KANK1Q14678 1352 aa21.31■■□□□ 1
LDLRAP1-203ENST00000470950 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
LDLRAP1-203ENST00000470950 ABCC5O15440 1437 aa21.29■■□□□ 1
LDLRAP1-203ENST00000470950 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
LDLRAP1-203ENST00000470950 MSH6P52701 1360 aa21.28■■□□□ 1
LDLRAP1-203ENST00000470950 SETD1AO15047 1707 aaKnown RBP21.27■■□□□ 1
LDLRAP1-203ENST00000470950 JCADQ9P266 1359 aa21.27■■□□□ 1
LDLRAP1-203ENST00000470950 SLAIN2Q9P270 581 aa21.27■■□□□ 1
LDLRAP1-203ENST00000470950 NWD1Q149M9 1564 aa21.27■□□□□ 0.99
LDLRAP1-203ENST00000470950 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
LDLRAP1-203ENST00000470950 PHLPP1O60346 1717 aa21.25■□□□□ 0.99
LDLRAP1-203ENST00000470950 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
LDLRAP1-203ENST00000470950 BCANQ96GW7 911 aa21.24■□□□□ 0.99
LDLRAP1-203ENST00000470950 NOS1P29475 1434 aa21.23■□□□□ 0.99
LDLRAP1-203ENST00000470950 ADGRB3O60242 1522 aa21.23■□□□□ 0.99
LDLRAP1-203ENST00000470950 DAPK1P53355 1430 aa21.21■□□□□ 0.99
LDLRAP1-203ENST00000470950 SLC52A1Q9NWF4 448 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms