RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MROH1Q8NDA8 1641 aa16.73■□□□□ 0.27
SREBF1-209ENST00000470247 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
SREBF1-209ENST00000470247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.277e-9■□□□□ 10.5
SREBF1-209ENST00000470247 NUP155O75694 1391 aa16.72■□□□□ 0.27
SREBF1-209ENST00000470247 UNC13BO14795 1591 aa16.72■□□□□ 0.27
SREBF1-209ENST00000470247 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
SREBF1-209ENST00000470247 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
SREBF1-209ENST00000470247 GGT6Q6P531 493 aa16.71■□□□□ 0.27
SREBF1-209ENST00000470247 PZPP20742 1482 aa16.71■□□□□ 0.27
SREBF1-209ENST00000470247 VWDEQ8N2E2 1590 aa16.7■□□□□ 0.26
SREBF1-209ENST00000470247 KDM5DQ9BY66 1539 aa16.7■□□□□ 0.26
SREBF1-209ENST00000470247 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
SREBF1-209ENST00000470247 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
SREBF1-209ENST00000470247 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
SREBF1-209ENST00000470247 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-209ENST00000470247 ARID4BQ4LE39 1312 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-209ENST00000470247 MLECQ14165 292 aa16.67■□□□□ 0.26
SREBF1-209ENST00000470247 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
SREBF1-209ENST00000470247 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
SREBF1-209ENST00000470247 IQGAP3Q86VI3 1631 aa16.64■□□□□ 0.25
SREBF1-209ENST00000470247 KANK1Q14678 1352 aa16.64■□□□□ 0.25
SREBF1-209ENST00000470247 LMTK2Q8IWU2 1503 aa16.63■□□□□ 0.25
SREBF1-209ENST00000470247 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
SREBF1-209ENST00000470247 ABCC3O15438 1527 aa16.62■□□□□ 0.25
SREBF1-209ENST00000470247 PKD2Q13563 968 aa16.62■□□□□ 0.25
SREBF1-209ENST00000470247 FOXD1Q16676 465 aa16.61■□□□□ 0.25
SREBF1-209ENST00000470247 CEP152O94986 1710 aa16.57■□□□□ 0.24
SREBF1-209ENST00000470247 TET3O43151 1660 aa16.56■□□□□ 0.24
SREBF1-209ENST00000470247 NPATQ14207 1427 aa16.56■□□□□ 0.24
SREBF1-209ENST00000470247 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
SREBF1-209ENST00000470247 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
SREBF1-209ENST00000470247 PLA2R1Q13018 1463 aa16.55■□□□□ 0.24
SREBF1-209ENST00000470247 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
SREBF1-209ENST00000470247 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-209ENST00000470247 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
SREBF1-209ENST00000470247 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
SREBF1-209ENST00000470247 E9PCH4 1651 aa16.54■□□□□ 0.24
SREBF1-209ENST00000470247 ZC3H13Q5T200 1668 aaKnown RBP16.54■□□□□ 0.24
SREBF1-209ENST00000470247 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
SREBF1-209ENST00000470247 PTPRTO14522 1441 aa16.53■□□□□ 0.24
SREBF1-209ENST00000470247 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
SREBF1-209ENST00000470247 CAMSAP1Q5T5Y3 1602 aa16.52■□□□□ 0.24
SREBF1-209ENST00000470247 FBXO31Q5XUX0 539 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-209ENST00000470247 ESF1Q9H501 851 aaKnown RBP16.52■□□□□ 0.24
SREBF1-209ENST00000470247 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
SREBF1-209ENST00000470247 CLSPNQ9HAW4 1339 aa16.51■□□□□ 0.23
SREBF1-209ENST00000470247 NOS1P29475 1434 aa16.51■□□□□ 0.23
SREBF1-209ENST00000470247 SIN3AQ96ST3 1273 aa16.5■□□□□ 0.23
SREBF1-209ENST00000470247 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
SREBF1-209ENST00000470247 KDM4FA0A1W2PPD8 638 aa16.49■□□□□ 0.23
SREBF1-209ENST00000470247 CEBPAP49715 358 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-209ENST00000470247 FER1L4A9Z1Z3 1794 aa16.48■□□□□ 0.23
SREBF1-209ENST00000470247 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
SREBF1-209ENST00000470247 ERVK-7P63135 1459 aa16.46■□□□□ 0.23
SREBF1-209ENST00000470247 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
SREBF1-209ENST00000470247 SPATA31D1Q6ZQQ2 1576 aa16.44■□□□□ 0.22
SREBF1-209ENST00000470247 TRPM2O94759 1503 aa16.44■□□□□ 0.22
SREBF1-209ENST00000470247 RIMS1Q86UR5 1692 aaKnown RBP16.43■□□□□ 0.22
SREBF1-209ENST00000470247 C3P01024 1663 aa16.43■□□□□ 0.22
SREBF1-209ENST00000470247 SYNMO15061 1565 aa16.43■□□□□ 0.22
SREBF1-209ENST00000470247 IDI1Q13907 227 aa16.42■□□□□ 0.22
SREBF1-209ENST00000470247 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
SREBF1-209ENST00000470247 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
SREBF1-209ENST00000470247 PTPRMP28827 1452 aa16.42■□□□□ 0.22
SREBF1-209ENST00000470247 NEUROD1Q13562 356 aa16.41■□□□□ 0.22
SREBF1-209ENST00000470247 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
SREBF1-209ENST00000470247 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
SREBF1-209ENST00000470247 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
SREBF1-209ENST00000470247 TNRQ92752 1358 aa16.39■□□□□ 0.21
SREBF1-209ENST00000470247 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
SREBF1-209ENST00000470247 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
SREBF1-209ENST00000470247 PIK3C2BO00750 1634 aa16.37■□□□□ 0.21
SREBF1-209ENST00000470247 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
SREBF1-209ENST00000470247 L3MBTL2Q969R5 705 aa16.33■□□□□ 0.2
SREBF1-209ENST00000470247 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
SREBF1-209ENST00000470247 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
SREBF1-209ENST00000470247 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
SREBF1-209ENST00000470247 NLRP1Q9C000 1473 aa16.31■□□□□ 0.2
SREBF1-209ENST00000470247 NEURL4Q96JN8 1562 aa16.3■□□□□ 0.2
SREBF1-209ENST00000470247 ADGRB3O60242 1522 aa16.29■□□□□ 0.2
SREBF1-209ENST00000470247 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
SREBF1-209ENST00000470247 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
SREBF1-209ENST00000470247 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
SREBF1-209ENST00000470247 TONSLQ96HA7 1378 aa16.27■□□□□ 0.2
SREBF1-209ENST00000470247 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-209ENST00000470247 KIF1BO60333 1816 aa16.26■□□□□ 0.19
SREBF1-209ENST00000470247 MYO3AQ8NEV4 1616 aa16.25■□□□□ 0.19
SREBF1-209ENST00000470247 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
SREBF1-209ENST00000470247 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-209ENST00000470247 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
SREBF1-209ENST00000470247 STAG3Q9UJ98 1225 aa16.24■□□□□ 0.19
SREBF1-209ENST00000470247 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
SREBF1-209ENST00000470247 CEP170BQ9Y4F5 1589 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-209ENST00000470247 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
SREBF1-209ENST00000470247 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
SREBF1-209ENST00000470247 KDM5AP29375 1690 aaKnown RBP16.23■□□□□ 0.19
SREBF1-209ENST00000470247 UHRF1BP1Q6BDS2 1440 aa16.22■□□□□ 0.19
SREBF1-209ENST00000470247 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
SREBF1-209ENST00000470247 THEMISQ8N1K5 641 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-209ENST00000470247 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms