RNA–Protein interactions for RNA: ENST00000469786.2

PSMD4-209, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-209ENST00000469786 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
PSMD4-209ENST00000469786 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
PSMD4-209ENST00000469786 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
PSMD4-209ENST00000469786 A2MP01023 1474 aa13.49□□□□□ -0.25
PSMD4-209ENST00000469786 CDK12Q9NYV4 1490 aaPredicted RBP13.49□□□□□ -0.25
PSMD4-209ENST00000469786 TNRQ92752 1358 aa13.49□□□□□ -0.25
PSMD4-209ENST00000469786 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
PSMD4-209ENST00000469786 PZPP20742 1482 aa13.48□□□□□ -0.25
PSMD4-209ENST00000469786 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
PSMD4-209ENST00000469786 LRP6O75581 1613 aa13.48□□□□□ -0.25
PSMD4-209ENST00000469786 FBXO31Q5XUX0 539 aaPredicted RBP13.47□□□□□ -0.25
PSMD4-209ENST00000469786 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
PSMD4-209ENST00000469786 ADGBQ8N7X0 1667 aa13.46□□□□□ -0.26
PSMD4-209ENST00000469786 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
PSMD4-209ENST00000469786 KDM5DQ9BY66 1539 aa13.44□□□□□ -0.26
PSMD4-209ENST00000469786 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
PSMD4-209ENST00000469786 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
PSMD4-209ENST00000469786 PHLPP1O60346 1717 aa13.44□□□□□ -0.26
PSMD4-209ENST00000469786 MAP3K1Q13233 1512 aa13.44□□□□□ -0.26
PSMD4-209ENST00000469786 SYCP2Q9BX26 1530 aa13.44□□□□□ -0.26
PSMD4-209ENST00000469786 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
PSMD4-209ENST00000469786 GGT6Q6P531 493 aa13.43□□□□□ -0.26
PSMD4-209ENST00000469786 MIA2Q96PC5 1412 aa13.43□□□□□ -0.26
PSMD4-209ENST00000469786 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
PSMD4-209ENST00000469786 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
PSMD4-209ENST00000469786 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
PSMD4-209ENST00000469786 JCADQ9P266 1359 aa13.42□□□□□ -0.26
PSMD4-209ENST00000469786 SPAG9O60271 1321 aaKnown RBP13.41□□□□□ -0.26
PSMD4-209ENST00000469786 CLIP1P30622 1438 aa13.41□□□□□ -0.26
PSMD4-209ENST00000469786 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
PSMD4-209ENST00000469786 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
PSMD4-209ENST00000469786 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
PSMD4-209ENST00000469786 LRRC9Q6ZRR7 1453 aa13.38□□□□□ -0.27
PSMD4-209ENST00000469786 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
PSMD4-209ENST00000469786 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
PSMD4-209ENST00000469786 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
PSMD4-209ENST00000469786 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
PSMD4-209ENST00000469786 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
PSMD4-209ENST00000469786 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
PSMD4-209ENST00000469786 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
PSMD4-209ENST00000469786 RXRBP28702 533 aa13.35□□□□□ -0.27
PSMD4-209ENST00000469786 RGS12O14924 1447 aa13.35□□□□□ -0.27
PSMD4-209ENST00000469786 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
PSMD4-209ENST00000469786 SCAF11Q99590 1463 aaKnown RBP13.35□□□□□ -0.27
PSMD4-209ENST00000469786 SLIT1O75093 1534 aa13.34□□□□□ -0.27
PSMD4-209ENST00000469786 TMEM94Q12767 1356 aa13.34□□□□□ -0.27
PSMD4-209ENST00000469786 NCOA2Q15596 1464 aa13.34□□□□□ -0.27
PSMD4-209ENST00000469786 EP400Q96L91 3159 aa13.34□□□□□ -0.27
PSMD4-209ENST00000469786 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
PSMD4-209ENST00000469786 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.28
PSMD4-209ENST00000469786 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
PSMD4-209ENST00000469786 LRP5O75197 1615 aa13.31□□□□□ -0.28
PSMD4-209ENST00000469786 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
PSMD4-209ENST00000469786 LTKP29376 864 aa13.31□□□□□ -0.28
PSMD4-209ENST00000469786 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
PSMD4-209ENST00000469786 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
PSMD4-209ENST00000469786 PRDM15P57071 1507 aaPredicted RBP13.29□□□□□ -0.28
PSMD4-209ENST00000469786 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
PSMD4-209ENST00000469786 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
PSMD4-209ENST00000469786 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
PSMD4-209ENST00000469786 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
PSMD4-209ENST00000469786 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
PSMD4-209ENST00000469786 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
PSMD4-209ENST00000469786 TET3O43151 1660 aa13.27□□□□□ -0.29
PSMD4-209ENST00000469786 ABCC3O15438 1527 aa13.26□□□□□ -0.29
PSMD4-209ENST00000469786 ERVK-7P63135 1459 aa13.26□□□□□ -0.29
PSMD4-209ENST00000469786 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
PSMD4-209ENST00000469786 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
PSMD4-209ENST00000469786 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
PSMD4-209ENST00000469786 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
PSMD4-209ENST00000469786 KCNA6P17658 529 aa13.24□□□□□ -0.29
PSMD4-209ENST00000469786 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
PSMD4-209ENST00000469786 CFAP65Q6ZU64 1925 aaKnown RBP13.23□□□□□ -0.29
PSMD4-209ENST00000469786 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
PSMD4-209ENST00000469786 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
PSMD4-209ENST00000469786 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
PSMD4-209ENST00000469786 AFF2P51816 1311 aa13.21□□□□□ -0.29
PSMD4-209ENST00000469786 KIF3BO15066 747 aa13.21□□□□□ -0.29
PSMD4-209ENST00000469786 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
PSMD4-209ENST00000469786 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
PSMD4-209ENST00000469786 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
PSMD4-209ENST00000469786 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
PSMD4-209ENST00000469786 ATAD2Q6PL18 1390 aa13.2□□□□□ -0.3
PSMD4-209ENST00000469786 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
PSMD4-209ENST00000469786 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
PSMD4-209ENST00000469786 EEA1Q15075 1411 aa13.18□□□□□ -0.3
PSMD4-209ENST00000469786 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
PSMD4-209ENST00000469786 MSH6P52701 1360 aa13.18□□□□□ -0.3
PSMD4-209ENST00000469786 MAST1Q9Y2H9 1570 aa13.17□□□□□ -0.3
PSMD4-209ENST00000469786 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
PSMD4-209ENST00000469786 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
PSMD4-209ENST00000469786 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
PSMD4-209ENST00000469786 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
PSMD4-209ENST00000469786 NHSL1Q5SYE7 1610 aa13.16□□□□□ -0.3
PSMD4-209ENST00000469786 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-209ENST00000469786 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-209ENST00000469786 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-209ENST00000469786 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-209ENST00000469786 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
PSMD4-209ENST00000469786 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms