RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 FER1L4A9Z1Z3 1794 aa19.69■□□□□ 0.74
SCAP-210ENST00000468965 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
SCAP-210ENST00000468965 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
SCAP-210ENST00000468965 MLECQ14165 292 aa19.67■□□□□ 0.74
SCAP-210ENST00000468965 MADDQ8WXG6 1647 aa19.66■□□□□ 0.74
SCAP-210ENST00000468965 CEP152O94986 1710 aa19.66■□□□□ 0.74
SCAP-210ENST00000468965 GGT6Q6P531 493 aa19.66■□□□□ 0.74
SCAP-210ENST00000468965 VWDEQ8N2E2 1590 aa19.65■□□□□ 0.74
SCAP-210ENST00000468965 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
SCAP-210ENST00000468965 CLTCQ00610 1675 aaKnown RBP19.64■□□□□ 0.73
SCAP-210ENST00000468965 RIMS1Q86UR5 1692 aaKnown RBP19.63■□□□□ 0.73
SCAP-210ENST00000468965 KDM5DQ9BY66 1539 aa19.62■□□□□ 0.73
SCAP-210ENST00000468965 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
SCAP-210ENST00000468965 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
SCAP-210ENST00000468965 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
SCAP-210ENST00000468965 ABCC3O15438 1527 aa19.61■□□□□ 0.73
SCAP-210ENST00000468965 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
SCAP-210ENST00000468965 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
SCAP-210ENST00000468965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.73
SCAP-210ENST00000468965 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
SCAP-210ENST00000468965 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
SCAP-210ENST00000468965 CFAP65Q6ZU64 1925 aaKnown RBP19.58■□□□□ 0.72
SCAP-210ENST00000468965 CAMSAP1Q5T5Y3 1602 aa19.58■□□□□ 0.72
SCAP-210ENST00000468965 LMTK2Q8IWU2 1503 aa19.57■□□□□ 0.72
SCAP-210ENST00000468965 TET3O43151 1660 aa19.56■□□□□ 0.72
SCAP-210ENST00000468965 NUP155O75694 1391 aa19.56■□□□□ 0.72
SCAP-210ENST00000468965 KANK1Q14678 1352 aa19.56■□□□□ 0.72
SCAP-210ENST00000468965 C3P01024 1663 aa19.56■□□□□ 0.72
SCAP-210ENST00000468965 CNTLNQ9NXG0 1405 aa19.55■□□□□ 0.72
SCAP-210ENST00000468965 PZPP20742 1482 aa19.54■□□□□ 0.72
SCAP-210ENST00000468965 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
SCAP-210ENST00000468965 HRCP23327 699 aa19.53■□□□□ 0.72
SCAP-210ENST00000468965 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
SCAP-210ENST00000468965 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.72
SCAP-210ENST00000468965 E9PCH4 1651 aa19.52■□□□□ 0.71
SCAP-210ENST00000468965 PTPRMP28827 1452 aa19.5■□□□□ 0.71
SCAP-210ENST00000468965 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
SCAP-210ENST00000468965 ZMYM3Q14202 1370 aa19.49■□□□□ 0.71
SCAP-210ENST00000468965 ARHGAP31Q2M1Z3 1444 aa19.48■□□□□ 0.71
SCAP-210ENST00000468965 NPATQ14207 1427 aa19.47■□□□□ 0.71
SCAP-210ENST00000468965 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
SCAP-210ENST00000468965 PREX1Q8TCU6 1659 aa19.46■□□□□ 0.71
SCAP-210ENST00000468965 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
SCAP-210ENST00000468965 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
SCAP-210ENST00000468965 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
SCAP-210ENST00000468965 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
SCAP-210ENST00000468965 ERVK-7P63135 1459 aa19.42■□□□□ 0.7
SCAP-210ENST00000468965 RPRD2Q5VT52 1461 aaKnown RBP19.42■□□□□ 0.7
SCAP-210ENST00000468965 SPATA31D1Q6ZQQ2 1576 aa19.42■□□□□ 0.7
SCAP-210ENST00000468965 SPHKAPQ2M3C7 1700 aa19.42■□□□□ 0.7
SCAP-210ENST00000468965 FBXO31Q5XUX0 539 aaPredicted RBP19.41■□□□□ 0.7
SCAP-210ENST00000468965 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
SCAP-210ENST00000468965 PKD2Q13563 968 aa19.4■□□□□ 0.7
SCAP-210ENST00000468965 NOS1P29475 1434 aa19.39■□□□□ 0.69
SCAP-210ENST00000468965 SYNMO15061 1565 aa19.39■□□□□ 0.69
SCAP-210ENST00000468965 FOXD1Q16676 465 aa19.37■□□□□ 0.69
SCAP-210ENST00000468965 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
SCAP-210ENST00000468965 PTPRTO14522 1441 aa19.35■□□□□ 0.69
SCAP-210ENST00000468965 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
SCAP-210ENST00000468965 TNRQ92752 1358 aa19.34■□□□□ 0.69
SCAP-210ENST00000468965 MYO3AQ8NEV4 1616 aa19.34■□□□□ 0.69
SCAP-210ENST00000468965 PIK3C2BO00750 1634 aa19.33■□□□□ 0.69
SCAP-210ENST00000468965 TRPM2O94759 1503 aa19.33■□□□□ 0.68
SCAP-210ENST00000468965 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
SCAP-210ENST00000468965 CLTCL1P53675 1640 aa19.31■□□□□ 0.68
SCAP-210ENST00000468965 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
SCAP-210ENST00000468965 MYO5BQ9ULV0 1848 aa19.3■□□□□ 0.68
SCAP-210ENST00000468965 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
SCAP-210ENST00000468965 NLRP1Q9C000 1473 aa19.27■□□□□ 0.67
SCAP-210ENST00000468965 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.67
SCAP-210ENST00000468965 KIF1BO60333 1816 aa19.26■□□□□ 0.67
SCAP-210ENST00000468965 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
SCAP-210ENST00000468965 A2ML1A8K2U0 1454 aa19.25■□□□□ 0.67
SCAP-210ENST00000468965 IDI1Q13907 227 aa19.25■□□□□ 0.67
SCAP-210ENST00000468965 UHRF1BP1Q6BDS2 1440 aa19.24■□□□□ 0.67
SCAP-210ENST00000468965 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
SCAP-210ENST00000468965 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
SCAP-210ENST00000468965 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
SCAP-210ENST00000468965 ADGRB3O60242 1522 aa19.22■□□□□ 0.67
SCAP-210ENST00000468965 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
SCAP-210ENST00000468965 CCDC144AA2RUR9 1427 aa19.21■□□□□ 0.67
SCAP-210ENST00000468965 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
SCAP-210ENST00000468965 SPATA31E1Q6ZUB1 1445 aa19.15■□□□□ 0.66
SCAP-210ENST00000468965 NEURL4Q96JN8 1562 aa19.15■□□□□ 0.66
SCAP-210ENST00000468965 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
SCAP-210ENST00000468965 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
SCAP-210ENST00000468965 IFT172Q9UG01 1749 aa19.12■□□□□ 0.65
SCAP-210ENST00000468965 PPLO60437 1756 aa19.11■□□□□ 0.65
SCAP-210ENST00000468965 SLIT1O75093 1534 aa19.11■□□□□ 0.65
SCAP-210ENST00000468965 ARHGAP23Q9P227 1491 aa19.11■□□□□ 0.65
SCAP-210ENST00000468965 HSPA2P54652 639 aa19.11■□□□□ 0.65
SCAP-210ENST00000468965 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
SCAP-210ENST00000468965 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
SCAP-210ENST00000468965 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
SCAP-210ENST00000468965 NEXMIFQ5QGS0 1516 aa19.1■□□□□ 0.65
SCAP-210ENST00000468965 THEMISQ8N1K5 641 aaPredicted RBP19.09■□□□□ 0.65
SCAP-210ENST00000468965 STRCQ7RTU9 1775 aa19.09■□□□□ 0.65
SCAP-210ENST00000468965 ZFYVE9O95405 1425 aa19.08■□□□□ 0.65
SCAP-210ENST00000468965 CLSPNQ9HAW4 1339 aa19.08■□□□□ 0.65
SCAP-210ENST00000468965 TMEM2Q9UHN6 1383 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms