RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
ABCF1-204ENST00000468958 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
ABCF1-204ENST00000468958 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
ABCF1-204ENST00000468958 CEP152O94986 1710 aa19.59■□□□□ 0.73
ABCF1-204ENST00000468958 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
ABCF1-204ENST00000468958 KDM5DQ9BY66 1539 aa19.59■□□□□ 0.73
ABCF1-204ENST00000468958 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
ABCF1-204ENST00000468958 NPATQ14207 1427 aa19.58■□□□□ 0.72
ABCF1-204ENST00000468958 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
ABCF1-204ENST00000468958 ZC3H13Q5T200 1668 aaKnown RBP19.55■□□□□ 0.72
ABCF1-204ENST00000468958 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
ABCF1-204ENST00000468958 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
ABCF1-204ENST00000468958 DEPDC5O75140 1603 aa19.53■□□□□ 0.72
ABCF1-204ENST00000468958 CEP170BQ9Y4F5 1589 aaPredicted RBP19.53■□□□□ 0.72
ABCF1-204ENST00000468958 ABCC3O15438 1527 aa19.52■□□□□ 0.72
ABCF1-204ENST00000468958 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
ABCF1-204ENST00000468958 CFAP65Q6ZU64 1925 aaKnown RBP19.51■□□□□ 0.71
ABCF1-204ENST00000468958 KIF15Q9NS87 1388 aa19.51■□□□□ 0.71
ABCF1-204ENST00000468958 PZPP20742 1482 aa19.5■□□□□ 0.71
ABCF1-204ENST00000468958 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
ABCF1-204ENST00000468958 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
ABCF1-204ENST00000468958 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
ABCF1-204ENST00000468958 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
ABCF1-204ENST00000468958 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
ABCF1-204ENST00000468958 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
ABCF1-204ENST00000468958 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
ABCF1-204ENST00000468958 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
ABCF1-204ENST00000468958 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
ABCF1-204ENST00000468958 FAM50AQ14320 339 aaKnown RBP19.45■□□□□ 0.7
ABCF1-204ENST00000468958 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
ABCF1-204ENST00000468958 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
ABCF1-204ENST00000468958 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
ABCF1-204ENST00000468958 POLR1AO95602 1720 aaPredicted RBP19.42■□□□□ 0.7
ABCF1-204ENST00000468958 VWDEQ8N2E2 1590 aa19.41■□□□□ 0.7
ABCF1-204ENST00000468958 TNRQ92752 1358 aa19.41■□□□□ 0.7
ABCF1-204ENST00000468958 ANKRD30AQ9BXX3 1397 aa19.41■□□□□ 0.7
ABCF1-204ENST00000468958 PTPRTO14522 1441 aa19.39■□□□□ 0.69
ABCF1-204ENST00000468958 ERVK-7P63135 1459 aa19.39■□□□□ 0.69
ABCF1-204ENST00000468958 PLA2R1Q13018 1463 aa19.38■□□□□ 0.69
ABCF1-204ENST00000468958 NEURL4Q96JN8 1562 aa19.36■□□□□ 0.69
ABCF1-204ENST00000468958 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
ABCF1-204ENST00000468958 UBR1Q8IWV7 1749 aa19.36■□□□□ 0.69
ABCF1-204ENST00000468958 LMTK2Q8IWU2 1503 aa19.35■□□□□ 0.69
ABCF1-204ENST00000468958 LTBP4Q8N2S1 1624 aa19.34■□□□□ 0.69
ABCF1-204ENST00000468958 NLRP1Q9C000 1473 aa19.34■□□□□ 0.69
ABCF1-204ENST00000468958 UNC13BO14795 1591 aa19.33■□□□□ 0.69
ABCF1-204ENST00000468958 UGGT1Q9NYU2 1555 aa19.33■□□□□ 0.69
ABCF1-204ENST00000468958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.684e-10■■■□□ 17.1
ABCF1-204ENST00000468958 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.68
ABCF1-204ENST00000468958 ANKRD50Q9ULJ7 1429 aa19.32■□□□□ 0.68
ABCF1-204ENST00000468958 EFCAB6Q5THR3 1501 aa19.31■□□□□ 0.68
ABCF1-204ENST00000468958 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
ABCF1-204ENST00000468958 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
ABCF1-204ENST00000468958 SYNMO15061 1565 aa19.3■□□□□ 0.68
ABCF1-204ENST00000468958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.3■□□□□ 0.68
ABCF1-204ENST00000468958 RRBP1Q9P2E9 1410 aaKnown RBP19.29■□□□□ 0.68
ABCF1-204ENST00000468958 GCC2Q8IWJ2 1684 aa19.29■□□□□ 0.68
ABCF1-204ENST00000468958 TET3O43151 1660 aa19.28■□□□□ 0.68
ABCF1-204ENST00000468958 CERKQ8TCT0 537 aa19.28■□□□□ 0.68
ABCF1-204ENST00000468958 ROCK1Q13464 1354 aa19.28■□□□□ 0.68
ABCF1-204ENST00000468958 FBXO41Q8TF61 875 aa19.27■□□□□ 0.68
ABCF1-204ENST00000468958 ITGAEP38570 1179 aa19.26■□□□□ 0.67
ABCF1-204ENST00000468958 E9PCH4 1651 aa19.26■□□□□ 0.67
ABCF1-204ENST00000468958 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
ABCF1-204ENST00000468958 KANK1Q14678 1352 aa19.25■□□□□ 0.67
ABCF1-204ENST00000468958 PKD2Q13563 968 aa19.25■□□□□ 0.67
ABCF1-204ENST00000468958 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
ABCF1-204ENST00000468958 IQGAP1P46940 1657 aa19.24■□□□□ 0.67
ABCF1-204ENST00000468958 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
ABCF1-204ENST00000468958 NOS1P29475 1434 aa19.22■□□□□ 0.67
ABCF1-204ENST00000468958 ZNF335Q9H4Z2 1342 aaPredicted RBP19.22■□□□□ 0.67
ABCF1-204ENST00000468958 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
ABCF1-204ENST00000468958 MED14O60244 1454 aa19.21■□□□□ 0.67
ABCF1-204ENST00000468958 THEMISQ8N1K5 641 aaPredicted RBP19.19■□□□□ 0.66
ABCF1-204ENST00000468958 ARHGAP23Q9P227 1491 aa19.19■□□□□ 0.66
ABCF1-204ENST00000468958 SLIT1O75093 1534 aa19.19■□□□□ 0.66
ABCF1-204ENST00000468958 NPHP4O75161 1426 aaPredicted RBP19.17■□□□□ 0.66
ABCF1-204ENST00000468958 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
ABCF1-204ENST00000468958 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
ABCF1-204ENST00000468958 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
ABCF1-204ENST00000468958 IDI1Q13907 227 aa19.14■□□□□ 0.65
ABCF1-204ENST00000468958 NAIPQ13075 1403 aa19.13■□□□□ 0.65
ABCF1-204ENST00000468958 TMEM131LA2VDJ0 1609 aa19.13■□□□□ 0.65
ABCF1-204ENST00000468958 IQSEC2Q5JU85 1478 aa19.12■□□□□ 0.65
ABCF1-204ENST00000468958 SCAF11Q99590 1463 aaKnown RBP19.12■□□□□ 0.65
ABCF1-204ENST00000468958 LTKP29376 864 aa19.12■□□□□ 0.65
ABCF1-204ENST00000468958 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
ABCF1-204ENST00000468958 NUP155O75694 1391 aa19.09■□□□□ 0.65
ABCF1-204ENST00000468958 TMEM2Q9UHN6 1383 aa19.08■□□□□ 0.65
ABCF1-204ENST00000468958 XIRP1Q702N8 1843 aaKnown RBP19.08■□□□□ 0.64
ABCF1-204ENST00000468958 CPS1P31327 1500 aa19.06■□□□□ 0.64
ABCF1-204ENST00000468958 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
ABCF1-204ENST00000468958 HFM1A2PYH4 1435 aa19.05■□□□□ 0.64
ABCF1-204ENST00000468958 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
ABCF1-204ENST00000468958 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
ABCF1-204ENST00000468958 SLC52A1Q9NWF4 448 aa19.03■□□□□ 0.64
ABCF1-204ENST00000468958 CLTCL1P53675 1640 aa19.01■□□□□ 0.63
ABCF1-204ENST00000468958 STAG3Q9UJ98 1225 aa19.01■□□□□ 0.63
ABCF1-204ENST00000468958 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
ABCF1-204ENST00000468958 EID1Q9Y6B2 187 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms