RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 SAMD9LQ8IVG5 1584 aa19.11■□□□□ 0.65
ARHGEF39-202ENST00000468876 A2MP01023 1474 aa19.1■□□□□ 0.65
ARHGEF39-202ENST00000468876 MED14O60244 1454 aa19.09■□□□□ 0.65
ARHGEF39-202ENST00000468876 STRCP1A6NGW2 1772 aa19.09■□□□□ 0.65
ARHGEF39-202ENST00000468876 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
ARHGEF39-202ENST00000468876 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.65
ARHGEF39-202ENST00000468876 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
ARHGEF39-202ENST00000468876 FAM135BQ49AJ0 1406 aa19.08■□□□□ 0.64
ARHGEF39-202ENST00000468876 IQGAP1P46940 1657 aa19.08■□□□□ 0.64
ARHGEF39-202ENST00000468876 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
ARHGEF39-202ENST00000468876 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
ARHGEF39-202ENST00000468876 PLXNC1O60486 1568 aa19.05■□□□□ 0.64
ARHGEF39-202ENST00000468876 ATP7AQ04656 1500 aa19.05■□□□□ 0.64
ARHGEF39-202ENST00000468876 CCDC18Q5T9S5 1454 aa19.04■□□□□ 0.64
ARHGEF39-202ENST00000468876 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
ARHGEF39-202ENST00000468876 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
ARHGEF39-202ENST00000468876 SYCP2Q9BX26 1530 aa19.02■□□□□ 0.64
ARHGEF39-202ENST00000468876 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.64
ARHGEF39-202ENST00000468876 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
ARHGEF39-202ENST00000468876 NLRP1Q9C000 1473 aa18.99■□□□□ 0.63
ARHGEF39-202ENST00000468876 PZPP20742 1482 aa18.98■□□□□ 0.63
ARHGEF39-202ENST00000468876 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
ARHGEF39-202ENST00000468876 JCADQ9P266 1359 aa18.96■□□□□ 0.63
ARHGEF39-202ENST00000468876 RXRBP28702 533 aa18.96■□□□□ 0.63
ARHGEF39-202ENST00000468876 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
ARHGEF39-202ENST00000468876 ROBO1Q9Y6N7 1651 aa18.95■□□□□ 0.62
ARHGEF39-202ENST00000468876 SRCAPQ6ZRS2 3230 aa18.95■□□□□ 0.62
ARHGEF39-202ENST00000468876 INO80Q9ULG1 1556 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF39-202ENST00000468876 WASHC2CQ9Y4E1 1318 aa18.93■□□□□ 0.62
ARHGEF39-202ENST00000468876 KIF3BO15066 747 aa18.91■□□□□ 0.62
ARHGEF39-202ENST00000468876 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
ARHGEF39-202ENST00000468876 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
ARHGEF39-202ENST00000468876 XIRP1Q702N8 1843 aaKnown RBP18.89■□□□□ 0.61
ARHGEF39-202ENST00000468876 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
ARHGEF39-202ENST00000468876 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
ARHGEF39-202ENST00000468876 FOXD1Q16676 465 aa18.88■□□□□ 0.61
ARHGEF39-202ENST00000468876 ZRANB1Q9UGI0 708 aa18.88■□□□□ 0.61
ARHGEF39-202ENST00000468876 ZC3H13Q5T200 1668 aaKnown RBP18.87■□□□□ 0.61
ARHGEF39-202ENST00000468876 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
ARHGEF39-202ENST00000468876 LRRC9Q6ZRR7 1453 aa18.86■□□□□ 0.61
ARHGEF39-202ENST00000468876 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
ARHGEF39-202ENST00000468876 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
ARHGEF39-202ENST00000468876 CFDP1Q9UEE9 299 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF39-202ENST00000468876 LRP6O75581 1613 aa18.85■□□□□ 0.61
ARHGEF39-202ENST00000468876 GPATCH8Q9UKJ3 1502 aaKnown RBP18.85■□□□□ 0.61
ARHGEF39-202ENST00000468876 SCAF11Q99590 1463 aaKnown RBP18.85■□□□□ 0.61
ARHGEF39-202ENST00000468876 TXNDC2Q86VQ3 553 aa18.85■□□□□ 0.61
ARHGEF39-202ENST00000468876 RBM33Q96EV2 1170 aaKnown RBP18.85■□□□□ 0.61
ARHGEF39-202ENST00000468876 DHX29Q7Z478 1369 aaKnown RBP18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 NUTM2DQ5VT03 806 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 PROSER2Q86WR7 435 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF39-202ENST00000468876 CDK12Q9NYV4 1490 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF39-202ENST00000468876 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
ARHGEF39-202ENST00000468876 EHBP1L1Q8N3D4 1523 aa18.81■□□□□ 0.6
ARHGEF39-202ENST00000468876 LTKP29376 864 aa18.81■□□□□ 0.6
ARHGEF39-202ENST00000468876 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
ARHGEF39-202ENST00000468876 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
ARHGEF39-202ENST00000468876 MSH6P52701 1360 aa18.78■□□□□ 0.6
ARHGEF39-202ENST00000468876 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
ARHGEF39-202ENST00000468876 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
ARHGEF39-202ENST00000468876 MAP3K1Q13233 1512 aa18.75■□□□□ 0.59
ARHGEF39-202ENST00000468876 KCNA6P17658 529 aa18.75■□□□□ 0.59
ARHGEF39-202ENST00000468876 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
ARHGEF39-202ENST00000468876 AFF2P51816 1311 aa18.74■□□□□ 0.59
ARHGEF39-202ENST00000468876 FGD6Q6ZV73 1430 aa18.74■□□□□ 0.59
ARHGEF39-202ENST00000468876 COL16A1Q07092 1604 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF39-202ENST00000468876 RGS12O14924 1447 aa18.74■□□□□ 0.59
ARHGEF39-202ENST00000468876 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
ARHGEF39-202ENST00000468876 ZNF644Q9H582 1327 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF39-202ENST00000468876 ERVK-7P63135 1459 aa18.71■□□□□ 0.59
ARHGEF39-202ENST00000468876 RBM6P78332 1123 aaKnown RBP18.7■□□□□ 0.58
ARHGEF39-202ENST00000468876 UBR1Q8IWV7 1749 aa18.7■□□□□ 0.58
ARHGEF39-202ENST00000468876 ATAD2Q6PL18 1390 aa18.69■□□□□ 0.58
ARHGEF39-202ENST00000468876 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
ARHGEF39-202ENST00000468876 ARHGAP23Q9P227 1491 aa18.69■□□□□ 0.58
ARHGEF39-202ENST00000468876 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
ARHGEF39-202ENST00000468876 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
ARHGEF39-202ENST00000468876 SLIT1O75093 1534 aa18.68■□□□□ 0.58
ARHGEF39-202ENST00000468876 PRDM15P57071 1507 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF39-202ENST00000468876 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
ARHGEF39-202ENST00000468876 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
ARHGEF39-202ENST00000468876 MBD5Q9P267 1494 aa18.66■□□□□ 0.58
ARHGEF39-202ENST00000468876 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
ARHGEF39-202ENST00000468876 CAMSAP2Q08AD1 1489 aa18.64■□□□□ 0.57
ARHGEF39-202ENST00000468876 BCANQ96GW7 911 aa18.63■□□□□ 0.57
ARHGEF39-202ENST00000468876 C8orf37Q96NL8 207 aa18.63■□□□□ 0.57
ARHGEF39-202ENST00000468876 NKTRP30414 1462 aaKnown RBP18.63■□□□□ 0.57
ARHGEF39-202ENST00000468876 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
ARHGEF39-202ENST00000468876 C14orf37Q86TY3 774 aa18.62■□□□□ 0.57
ARHGEF39-202ENST00000468876 ABCC3O15438 1527 aa18.62■□□□□ 0.57
ARHGEF39-202ENST00000468876 TMEM2Q9UHN6 1383 aa18.61■□□□□ 0.57
ARHGEF39-202ENST00000468876 NGLY1Q96IV0 654 aa18.61■□□□□ 0.57
ARHGEF39-202ENST00000468876 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.56
ARHGEF39-202ENST00000468876 AHDC1Q5TGY3 1603 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF39-202ENST00000468876 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
ARHGEF39-202ENST00000468876 KDM5AP29375 1690 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms