RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 ITGAEP38570 1179 aa25.2■■□□□ 1.62
CDK11A-212ENST00000468397 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
CDK11A-212ENST00000468397 FAM135AQ9P2D6 1515 aa25.19■■□□□ 1.62
CDK11A-212ENST00000468397 MROH2AA6NES4 1674 aa25.19■■□□□ 1.62
CDK11A-212ENST00000468397 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
CDK11A-212ENST00000468397 CLTCQ00610 1675 aaKnown RBP25.17■■□□□ 1.62
CDK11A-212ENST00000468397 C3P01024 1663 aa25.14■■□□□ 1.62
CDK11A-212ENST00000468397 KDM5DQ9BY66 1539 aa25.14■■□□□ 1.62
CDK11A-212ENST00000468397 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
CDK11A-212ENST00000468397 ANKRD50Q9ULJ7 1429 aa25.12■■□□□ 1.61
CDK11A-212ENST00000468397 ZC3H13Q5T200 1668 aaKnown RBP25.11■■□□□ 1.61
CDK11A-212ENST00000468397 DEPDC5O75140 1603 aa25.11■■□□□ 1.61
CDK11A-212ENST00000468397 MROH1Q8NDA8 1641 aa25.11■■□□□ 1.61
CDK11A-212ENST00000468397 PRDM15P57071 1507 aaPredicted RBP25.1■■□□□ 1.61
CDK11A-212ENST00000468397 WASHC2CQ9Y4E1 1318 aa25.09■■□□□ 1.61
CDK11A-212ENST00000468397 ZMYM3Q14202 1370 aa25.07■■□□□ 1.6
CDK11A-212ENST00000468397 CEBPAP49715 358 aaPredicted RBP25.07■■□□□ 1.6
CDK11A-212ENST00000468397 ABCC3O15438 1527 aa25.06■■□□□ 1.6
CDK11A-212ENST00000468397 KANK1Q14678 1352 aa25.05■■□□□ 1.6
CDK11A-212ENST00000468397 CEP152O94986 1710 aa25.03■■□□□ 1.6
CDK11A-212ENST00000468397 SETD1BQ9UPS6 1966 aaKnown RBP25.03■■□□□ 1.6
CDK11A-212ENST00000468397 NPATQ14207 1427 aa25.02■■□□□ 1.6
CDK11A-212ENST00000468397 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
CDK11A-212ENST00000468397 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
CDK11A-212ENST00000468397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.01■■□□□ 1.593e-6■■■□□ 18.5
CDK11A-212ENST00000468397 CAMSAP1Q5T5Y3 1602 aa25■■□□□ 1.59
CDK11A-212ENST00000468397 UNC13BO14795 1591 aa24.99■■□□□ 1.59
CDK11A-212ENST00000468397 PZPP20742 1482 aa24.99■■□□□ 1.59
CDK11A-212ENST00000468397 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
CDK11A-212ENST00000468397 HFM1A2PYH4 1435 aa24.96■■□□□ 1.59
CDK11A-212ENST00000468397 NAIPQ13075 1403 aa24.96■■□□□ 1.59
CDK11A-212ENST00000468397 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
CDK11A-212ENST00000468397 LMTK3Q96Q04 1460 aa24.95■■□□□ 1.58
CDK11A-212ENST00000468397 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.58
CDK11A-212ENST00000468397 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
CDK11A-212ENST00000468397 MYO3AQ8NEV4 1616 aa24.9■■□□□ 1.58
CDK11A-212ENST00000468397 EFCAB6Q5THR3 1501 aa24.89■■□□□ 1.57
CDK11A-212ENST00000468397 IQGAP3Q86VI3 1631 aa24.89■■□□□ 1.57
CDK11A-212ENST00000468397 TNRQ92752 1358 aa24.88■■□□□ 1.57
CDK11A-212ENST00000468397 TET3O43151 1660 aa24.88■■□□□ 1.57
CDK11A-212ENST00000468397 SPATA31D1Q6ZQQ2 1576 aa24.86■■□□□ 1.57
CDK11A-212ENST00000468397 ERVK-7P63135 1459 aa24.86■■□□□ 1.57
CDK11A-212ENST00000468397 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
CDK11A-212ENST00000468397 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
CDK11A-212ENST00000468397 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
CDK11A-212ENST00000468397 NUP155O75694 1391 aa24.85■■□□□ 1.57
CDK11A-212ENST00000468397 CEP170BQ9Y4F5 1589 aaPredicted RBP24.83■■□□□ 1.57
CDK11A-212ENST00000468397 RPRD2Q5VT52 1461 aaKnown RBP24.82■■□□□ 1.56
CDK11A-212ENST00000468397 NLRP1Q9C000 1473 aa24.8■■□□□ 1.56
CDK11A-212ENST00000468397 A2ML1A8K2U0 1454 aa24.79■■□□□ 1.56
CDK11A-212ENST00000468397 HSPA2P54652 639 aa24.79■■□□□ 1.56
CDK11A-212ENST00000468397 E9PCH4 1651 aa24.76■■□□□ 1.55
CDK11A-212ENST00000468397 SETD5Q9C0A6 1442 aa24.76■■□□□ 1.55
CDK11A-212ENST00000468397 TRIM52Q96A61 297 aa24.74■■□□□ 1.55
CDK11A-212ENST00000468397 NOS1P29475 1434 aa24.73■■□□□ 1.55
CDK11A-212ENST00000468397 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
CDK11A-212ENST00000468397 SYNMO15061 1565 aa24.71■■□□□ 1.55
CDK11A-212ENST00000468397 UGGT1Q9NYU2 1555 aa24.7■■□□□ 1.54
CDK11A-212ENST00000468397 PLA2R1Q13018 1463 aa24.67■■□□□ 1.54
CDK11A-212ENST00000468397 RAB3GAP2Q9H2M9 1393 aa24.67■■□□□ 1.54
CDK11A-212ENST00000468397 PIK3C2BO00750 1634 aa24.65■■□□□ 1.54
CDK11A-212ENST00000468397 UBR1Q8IWV7 1749 aa24.65■■□□□ 1.54
CDK11A-212ENST00000468397 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
CDK11A-212ENST00000468397 SPHKAPQ2M3C7 1700 aa24.64■■□□□ 1.54
CDK11A-212ENST00000468397 THEMISQ8N1K5 641 aaPredicted RBP24.64■■□□□ 1.54
CDK11A-212ENST00000468397 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
CDK11A-212ENST00000468397 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
CDK11A-212ENST00000468397 KDM5AP29375 1690 aaKnown RBP24.63■■□□□ 1.53
CDK11A-212ENST00000468397 STAG3Q9UJ98 1225 aa24.6■■□□□ 1.53
CDK11A-212ENST00000468397 ADGRB3O60242 1522 aa24.6■■□□□ 1.53
CDK11A-212ENST00000468397 POLR1AO95602 1720 aaPredicted RBP24.59■■□□□ 1.53
CDK11A-212ENST00000468397 PKD2Q13563 968 aa24.59■■□□□ 1.53
CDK11A-212ENST00000468397 IDI1Q13907 227 aa24.59■■□□□ 1.53
CDK11A-212ENST00000468397 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
CDK11A-212ENST00000468397 PTPRTO14522 1441 aa24.58■■□□□ 1.53
CDK11A-212ENST00000468397 TRPM2O94759 1503 aa24.56■■□□□ 1.52
CDK11A-212ENST00000468397 HRCP23327 699 aa24.56■■□□□ 1.52
CDK11A-212ENST00000468397 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
CDK11A-212ENST00000468397 MPHOSPH9Q99550 1183 aa24.54■■□□□ 1.52
CDK11A-212ENST00000468397 SLIT1O75093 1534 aa24.53■■□□□ 1.52
CDK11A-212ENST00000468397 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
CDK11A-212ENST00000468397 NCKAP5LQ9HCH0 1330 aa24.53■■□□□ 1.52
CDK11A-212ENST00000468397 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
CDK11A-212ENST00000468397 TMEM131LA2VDJ0 1609 aa24.51■■□□□ 1.51
CDK11A-212ENST00000468397 MYO5BQ9ULV0 1848 aa24.51■■□□□ 1.51
CDK11A-212ENST00000468397 CLTCL1P53675 1640 aa24.5■■□□□ 1.51
CDK11A-212ENST00000468397 TMEM2Q9UHN6 1383 aa24.49■■□□□ 1.51
CDK11A-212ENST00000468397 NEURL4Q96JN8 1562 aa24.49■■□□□ 1.51
CDK11A-212ENST00000468397 CHGAP10645 457 aaKnown RBP24.48■■□□□ 1.51
CDK11A-212ENST00000468397 SCAF11Q99590 1463 aaKnown RBP24.47■■□□□ 1.51
CDK11A-212ENST00000468397 EID1Q9Y6B2 187 aa24.47■■□□□ 1.51
CDK11A-212ENST00000468397 KIF1BO60333 1816 aa24.46■■□□□ 1.51
CDK11A-212ENST00000468397 MED14O60244 1454 aa24.45■■□□□ 1.51
CDK11A-212ENST00000468397 FOXD1Q16676 465 aa24.45■■□□□ 1.5
CDK11A-212ENST00000468397 NPHP4O75161 1426 aaPredicted RBP24.44■■□□□ 1.5
CDK11A-212ENST00000468397 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
CDK11A-212ENST00000468397 TXNDC2Q86VQ3 553 aa24.43■■□□□ 1.5
CDK11A-212ENST00000468397 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
CDK11A-212ENST00000468397 LTKP29376 864 aa24.4■■□□□ 1.5
CDK11A-212ENST00000468397 HDGFP51858 240 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms