RNA–Protein interactions for RNA: ENST00000467948.1

C4A-249, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 5

Gene C4A, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-249ENST00000467948 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
C4A-249ENST00000467948 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
C4A-249ENST00000467948 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
C4A-249ENST00000467948 FAM135AQ9P2D6 1515 aa16.3■□□□□ 0.2
C4A-249ENST00000467948 ARID4BQ4LE39 1312 aaPredicted RBP16.3■□□□□ 0.2
C4A-249ENST00000467948 KIF3BO15066 747 aa16.3■□□□□ 0.2
C4A-249ENST00000467948 DEPDC5O75140 1603 aa16.28■□□□□ 0.2
C4A-249ENST00000467948 MROH1Q8NDA8 1641 aa16.27■□□□□ 0.2
C4A-249ENST00000467948 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
C4A-249ENST00000467948 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
C4A-249ENST00000467948 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.19
C4A-249ENST00000467948 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
C4A-249ENST00000467948 HRCP23327 699 aa16.26■□□□□ 0.19
C4A-249ENST00000467948 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
C4A-249ENST00000467948 GGT6Q6P531 493 aa16.24■□□□□ 0.19
C4A-249ENST00000467948 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
C4A-249ENST00000467948 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
C4A-249ENST00000467948 UNC13BO14795 1591 aa16.22■□□□□ 0.19
C4A-249ENST00000467948 LMTK2Q8IWU2 1503 aa16.22■□□□□ 0.19
C4A-249ENST00000467948 MLECQ14165 292 aa16.21■□□□□ 0.19
C4A-249ENST00000467948 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
C4A-249ENST00000467948 ABCC3O15438 1527 aa16.19■□□□□ 0.18
C4A-249ENST00000467948 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
C4A-249ENST00000467948 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
C4A-249ENST00000467948 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
C4A-249ENST00000467948 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
C4A-249ENST00000467948 KANK1Q14678 1352 aa16.18■□□□□ 0.18
C4A-249ENST00000467948 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
C4A-249ENST00000467948 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
C4A-249ENST00000467948 IQGAP3Q86VI3 1631 aa16.16■□□□□ 0.18
C4A-249ENST00000467948 NUP155O75694 1391 aa16.15■□□□□ 0.18
C4A-249ENST00000467948 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
C4A-249ENST00000467948 HSPA2P54652 639 aa16.14■□□□□ 0.17
C4A-249ENST00000467948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
C4A-249ENST00000467948 PZPP20742 1482 aa16.13■□□□□ 0.17
C4A-249ENST00000467948 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
C4A-249ENST00000467948 NPATQ14207 1427 aa16.12■□□□□ 0.17
C4A-249ENST00000467948 RPRD2Q5VT52 1461 aaKnown RBP16.12■□□□□ 0.17
C4A-249ENST00000467948 EFCAB6Q5THR3 1501 aa16.11■□□□□ 0.17
C4A-249ENST00000467948 TET3O43151 1660 aa16.1■□□□□ 0.17
C4A-249ENST00000467948 PREX1Q8TCU6 1659 aa16.1■□□□□ 0.17
C4A-249ENST00000467948 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
C4A-249ENST00000467948 C3P01024 1663 aa16.09■□□□□ 0.17
C4A-249ENST00000467948 CEP152O94986 1710 aa16.08■□□□□ 0.17
C4A-249ENST00000467948 STRCQ7RTU9 1775 aa16.08■□□□□ 0.16
C4A-249ENST00000467948 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
C4A-249ENST00000467948 NOS1P29475 1434 aa16.07■□□□□ 0.16
C4A-249ENST00000467948 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
C4A-249ENST00000467948 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
C4A-249ENST00000467948 CERKQ8TCT0 537 aa16.06■□□□□ 0.16
C4A-249ENST00000467948 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
C4A-249ENST00000467948 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
C4A-249ENST00000467948 PTPRTO14522 1441 aa16.05■□□□□ 0.16
C4A-249ENST00000467948 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
C4A-249ENST00000467948 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
C4A-249ENST00000467948 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
C4A-249ENST00000467948 PCGF6Q9BYE7 350 aa16.04■□□□□ 0.16
C4A-249ENST00000467948 E9PCH4 1651 aa16.04■□□□□ 0.16
C4A-249ENST00000467948 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.16
C4A-249ENST00000467948 PKD2Q13563 968 aa16.02■□□□□ 0.16
C4A-249ENST00000467948 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
C4A-249ENST00000467948 TNRQ92752 1358 aa16■□□□□ 0.15
C4A-249ENST00000467948 PLA2R1Q13018 1463 aa16■□□□□ 0.15
C4A-249ENST00000467948 NLRP1Q9C000 1473 aa16■□□□□ 0.15
C4A-249ENST00000467948 SLC52A1Q9NWF4 448 aa16■□□□□ 0.15
C4A-249ENST00000467948 SYNMO15061 1565 aa15.98■□□□□ 0.15
C4A-249ENST00000467948 TRPM2O94759 1503 aa15.96■□□□□ 0.15
C4A-249ENST00000467948 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
C4A-249ENST00000467948 DISP3Q9P2K9 1392 aa15.96■□□□□ 0.15
C4A-249ENST00000467948 ANKRD30BQ9BXX2 1392 aa15.95■□□□□ 0.14
C4A-249ENST00000467948 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
C4A-249ENST00000467948 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
C4A-249ENST00000467948 IDI1Q13907 227 aa15.94■□□□□ 0.14
C4A-249ENST00000467948 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
C4A-249ENST00000467948 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
C4A-249ENST00000467948 ZNF142P52746 1687 aaPredicted RBP15.93■□□□□ 0.14
C4A-249ENST00000467948 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
C4A-249ENST00000467948 SPHKAPQ2M3C7 1700 aa15.93■□□□□ 0.14
C4A-249ENST00000467948 FOXD1Q16676 465 aa15.92■□□□□ 0.14
C4A-249ENST00000467948 SOCS7O14512 581 aa15.91■□□□□ 0.14
C4A-249ENST00000467948 CEP170BQ9Y4F5 1589 aaPredicted RBP15.91■□□□□ 0.14
C4A-249ENST00000467948 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
C4A-249ENST00000467948 NEURL4Q96JN8 1562 aa15.89■□□□□ 0.13
C4A-249ENST00000467948 UGGT1Q9NYU2 1555 aa15.88■□□□□ 0.13
C4A-249ENST00000467948 LTBP4Q8N2S1 1624 aa15.87■□□□□ 0.13
C4A-249ENST00000467948 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
C4A-249ENST00000467948 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
C4A-249ENST00000467948 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
C4A-249ENST00000467948 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
C4A-249ENST00000467948 ADGRB3O60242 1522 aa15.86■□□□□ 0.13
C4A-249ENST00000467948 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
C4A-249ENST00000467948 ARHGAP23Q9P227 1491 aa15.85■□□□□ 0.13
C4A-249ENST00000467948 SLIT1O75093 1534 aa15.85■□□□□ 0.13
C4A-249ENST00000467948 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
C4A-249ENST00000467948 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
C4A-249ENST00000467948 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
C4A-249ENST00000467948 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
C4A-249ENST00000467948 RPGRIP1LQ68CZ1 1315 aa15.8■□□□□ 0.12
C4A-249ENST00000467948 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
C4A-249ENST00000467948 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms