RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 PPP6R1Q9UPN7 881 aa25.51■■□□□ 1.67
VARS2-204ENST00000467717 EIF2AK4Q9P2K8 1649 aaKnown RBP25.51■■□□□ 1.67
VARS2-204ENST00000467717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.48■■□□□ 1.672e-8■■■□□ 15.4
VARS2-204ENST00000467717 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
VARS2-204ENST00000467717 GCC2Q8IWJ2 1684 aa25.47■■□□□ 1.67
VARS2-204ENST00000467717 BCORL1Q5H9F3 1711 aa25.46■■□□□ 1.67
VARS2-204ENST00000467717 RAB3GAP2Q9H2M9 1393 aa25.46■■□□□ 1.67
VARS2-204ENST00000467717 ACIN1Q9UKV3 1341 aaKnown RBP25.46■■□□□ 1.67
VARS2-204ENST00000467717 HRCP23327 699 aa25.45■■□□□ 1.66
VARS2-204ENST00000467717 PTPRMP28827 1452 aa25.45■■□□□ 1.66
VARS2-204ENST00000467717 ESF1Q9H501 851 aaKnown RBP25.44■■□□□ 1.66
VARS2-204ENST00000467717 KANK1Q14678 1352 aa25.44■■□□□ 1.66
VARS2-204ENST00000467717 WASHC2CQ9Y4E1 1318 aa25.43■■□□□ 1.66
VARS2-204ENST00000467717 RNF17Q9BXT8 1623 aaKnown RBP25.42■■□□□ 1.66
VARS2-204ENST00000467717 NUP155O75694 1391 aa25.42■■□□□ 1.66
VARS2-204ENST00000467717 TRIM52Q96A61 297 aa25.41■■□□□ 1.66
VARS2-204ENST00000467717 PRDM15P57071 1507 aaPredicted RBP25.4■■□□□ 1.66
VARS2-204ENST00000467717 DEPDC5O75140 1603 aa25.38■■□□□ 1.65
VARS2-204ENST00000467717 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
VARS2-204ENST00000467717 LMTK3Q96Q04 1460 aa25.38■■□□□ 1.65
VARS2-204ENST00000467717 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
VARS2-204ENST00000467717 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
VARS2-204ENST00000467717 UNC13BO14795 1591 aa25.36■■□□□ 1.65
VARS2-204ENST00000467717 KDM5DQ9BY66 1539 aa25.36■■□□□ 1.65
VARS2-204ENST00000467717 ABCC3O15438 1527 aa25.33■■□□□ 1.65
VARS2-204ENST00000467717 VWDEQ8N2E2 1590 aa25.33■■□□□ 1.65
VARS2-204ENST00000467717 MADDQ8WXG6 1647 aa25.32■■□□□ 1.64
VARS2-204ENST00000467717 LMTK2Q8IWU2 1503 aa25.31■■□□□ 1.64
VARS2-204ENST00000467717 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
VARS2-204ENST00000467717 SLC4A1APQ9BWU0 796 aaKnown RBP25.29■■□□□ 1.64
VARS2-204ENST00000467717 MPHOSPH9Q99550 1183 aa25.27■■□□□ 1.64
VARS2-204ENST00000467717 PZPP20742 1482 aa25.26■■□□□ 1.63
VARS2-204ENST00000467717 IQGAP3Q86VI3 1631 aa25.25■■□□□ 1.63
VARS2-204ENST00000467717 ZC3H13Q5T200 1668 aaKnown RBP25.24■■□□□ 1.63
VARS2-204ENST00000467717 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
VARS2-204ENST00000467717 FER1L4A9Z1Z3 1794 aa25.23■■□□□ 1.63
VARS2-204ENST00000467717 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
VARS2-204ENST00000467717 CEBPAP49715 358 aaPredicted RBP25.23■■□□□ 1.63
VARS2-204ENST00000467717 PKD2Q13563 968 aa25.22■■□□□ 1.63
VARS2-204ENST00000467717 CLTCQ00610 1675 aaKnown RBP25.22■■□□□ 1.63
VARS2-204ENST00000467717 NPATQ14207 1427 aa25.21■■□□□ 1.63
VARS2-204ENST00000467717 PLPPR3Q6T4P5 718 aa25.2■■□□□ 1.62
VARS2-204ENST00000467717 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
VARS2-204ENST00000467717 FBXO31Q5XUX0 539 aaPredicted RBP25.18■■□□□ 1.62
VARS2-204ENST00000467717 MROH2AA6NES4 1674 aa25.17■■□□□ 1.62
VARS2-204ENST00000467717 TET3O43151 1660 aa25.17■■□□□ 1.62
VARS2-204ENST00000467717 RPRD2Q5VT52 1461 aaKnown RBP25.17■■□□□ 1.62
VARS2-204ENST00000467717 CEP152O94986 1710 aa25.17■■□□□ 1.62
VARS2-204ENST00000467717 CAMSAP1Q5T5Y3 1602 aa25.16■■□□□ 1.62
VARS2-204ENST00000467717 FOXD1Q16676 465 aa25.12■■□□□ 1.61
VARS2-204ENST00000467717 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
VARS2-204ENST00000467717 CERKQ8TCT0 537 aa25.1■■□□□ 1.61
VARS2-204ENST00000467717 NOS1P29475 1434 aa25.1■■□□□ 1.61
VARS2-204ENST00000467717 HSPA2P54652 639 aa25.09■■□□□ 1.61
VARS2-204ENST00000467717 C3P01024 1663 aa25.09■■□□□ 1.61
VARS2-204ENST00000467717 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
VARS2-204ENST00000467717 TNRQ92752 1358 aa25.08■■□□□ 1.61
VARS2-204ENST00000467717 PTPRTO14522 1441 aa25.08■■□□□ 1.61
VARS2-204ENST00000467717 SPATA31D1Q6ZQQ2 1576 aa25.06■■□□□ 1.6
VARS2-204ENST00000467717 SOCS7O14512 581 aa25.06■■□□□ 1.6
VARS2-204ENST00000467717 ILDR2Q71H61 639 aa25.06■■□□□ 1.6
VARS2-204ENST00000467717 E9PCH4 1651 aa25.06■■□□□ 1.6
VARS2-204ENST00000467717 DISP3Q9P2K9 1392 aa25.05■■□□□ 1.6
VARS2-204ENST00000467717 SLC52A1Q9NWF4 448 aa25.04■■□□□ 1.6
VARS2-204ENST00000467717 PLA2R1Q13018 1463 aa25.03■■□□□ 1.6
VARS2-204ENST00000467717 ANKRD30BQ9BXX2 1392 aa25.01■■□□□ 1.59
VARS2-204ENST00000467717 IDI1Q13907 227 aa25■■□□□ 1.59
VARS2-204ENST00000467717 PREX1Q8TCU6 1659 aa25■■□□□ 1.59
VARS2-204ENST00000467717 NLRP1Q9C000 1473 aa24.98■■□□□ 1.59
VARS2-204ENST00000467717 TRPM2O94759 1503 aa24.97■■□□□ 1.59
VARS2-204ENST00000467717 SYNMO15061 1565 aa24.97■■□□□ 1.59
VARS2-204ENST00000467717 CCDC144AA2RUR9 1427 aa24.95■■□□□ 1.59
VARS2-204ENST00000467717 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.59
VARS2-204ENST00000467717 STAG3Q9UJ98 1225 aa24.92■■□□□ 1.58
VARS2-204ENST00000467717 SETD1BQ9UPS6 1966 aaKnown RBP24.92■■□□□ 1.58
VARS2-204ENST00000467717 CFAP65Q6ZU64 1925 aaKnown RBP24.91■■□□□ 1.58
VARS2-204ENST00000467717 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
VARS2-204ENST00000467717 UGGT1Q9NYU2 1555 aa24.91■■□□□ 1.58
VARS2-204ENST00000467717 SPHKAPQ2M3C7 1700 aa24.91■■□□□ 1.58
VARS2-204ENST00000467717 A2ML1A8K2U0 1454 aa24.9■■□□□ 1.58
VARS2-204ENST00000467717 CHGAP10645 457 aaKnown RBP24.89■■□□□ 1.58
VARS2-204ENST00000467717 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
VARS2-204ENST00000467717 THEMISQ8N1K5 641 aaPredicted RBP24.87■■□□□ 1.57
VARS2-204ENST00000467717 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
VARS2-204ENST00000467717 PIK3C2BO00750 1634 aa24.86■■□□□ 1.57
VARS2-204ENST00000467717 CEP170BQ9Y4F5 1589 aaPredicted RBP24.85■■□□□ 1.57
VARS2-204ENST00000467717 CLTCL1P53675 1640 aa24.85■■□□□ 1.57
VARS2-204ENST00000467717 STRCQ7RTU9 1775 aa24.84■■□□□ 1.57
VARS2-204ENST00000467717 SIN3AQ96ST3 1273 aa24.83■■□□□ 1.57
VARS2-204ENST00000467717 ADGRB3O60242 1522 aa24.81■■□□□ 1.56
VARS2-204ENST00000467717 SPATA31E1Q6ZUB1 1445 aa24.79■■□□□ 1.56
VARS2-204ENST00000467717 NEUROD1Q13562 356 aa24.79■■□□□ 1.56
VARS2-204ENST00000467717 ZNF326Q5BKZ1 582 aaKnown RBP24.79■■□□□ 1.56
VARS2-204ENST00000467717 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
VARS2-204ENST00000467717 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
VARS2-204ENST00000467717 RGL3Q3MIN7 710 aa24.77■■□□□ 1.56
VARS2-204ENST00000467717 TMEM131LA2VDJ0 1609 aa24.75■■□□□ 1.55
VARS2-204ENST00000467717 RPGRIP1LQ68CZ1 1315 aa24.75■■□□□ 1.55
VARS2-204ENST00000467717 HDGFP51858 240 aaKnown RBP24.74■■□□□ 1.55
VARS2-204ENST00000467717 KDM5AP29375 1690 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms